KEGG   Ostreococcus tauri: OT_ostta07g03900
Entry
OT_ostta07g03900  CDS       T01358                                 
Name
(RefSeq) SNF2-related
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ota  Ostreococcus tauri
Pathway
ota03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    OT_ostta07g03900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta07g03900
   03036 Chromosome and associated proteins [BR:ota03036]
    OT_ostta07g03900
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     OT_ostta07g03900
Chromosome and associated proteins [BR:ota03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     OT_ostta07g03900
  Chromatin remodeling factors
   BAF complex
    OT_ostta07g03900
   PBAF complex
    OT_ostta07g03900
   GBAF(ncBAF) complex
    OT_ostta07g03900
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD AAA_14 DUF1440 DHC AAA_22
Other DBs
NCBI-GeneID: 9836690
NCBI-ProteinID: XP_022839498
OrcAE: OT_ostta07g03900
UniProt: A0A090M812
LinkDB
Position
7:<633209..>636865
AA seq 1218 aa
MALDAARASDAGDAPTHSGRGDGASESDRSDARLRHGKIGDRDVSFVLQSSFAGNQLDRL
KEQIAMLRKLRAGERFIAPGYGGRGTTRARKERLFGPLDVGVGYGLNVDAKTYFTNAEWM
YAYRELPLFGQLADVRSTDAAKAKFARKRDGDESAELTLGDVNRVVTRPVDSLEREANRV
LERARLRELETLRRRLDQVNNLANMRAEHRAQQKLQLEIRIKQLELVHVQQRVRNELILA
QHAIMHMPERAYKKMVKDDIKVLAEKKKQAEKKEKAELTDFLRNLIAMRKRMSQESSTTR
DERISRNRAVVKIHEKLNREFMRKARDENSERLLRLEALKANDLNAYRELLAEARGRETD
MAAGGEGDKYEALTQFLNATETYLTKLGGKIAAVKIEQARSEAAAAAVSEAELKGMNEDE
LKIIAEEAANNAALENGEAILDGAVAGGDTKERYYAMAHSTQEIITHQPRMLTFGQLRDY
QLVSLQWMISLYNNKLNGILADEMGLGKTVQVCALIAYLFESKQNYGPHLIIVPNAVVVN
WKAEIKRWLPKLTSVFYVGTKDARAKIFQQQVSQLKFNVLVTSYEFIMRDRSKLSKVAWK
YIIIDEAQRLKDREGRLSRDLDKFRSQRRLLLTGTPLQNDLSELWSLLNLLLPEVFDSSK
VFQEWFGTQKGGSDGVDDVDWIEREKKVIVISRLHQILEPFMLRRLVQDVESKLPPRITV
VVHCPFSAFQSVCYDWIRQTATVRVEPGTRLGLAAQQNFHGYLPIHNRAMELRKLCNHPA
LNYPPEKGGDFRGPDLVRACGKLWILDRILVKLQHSGHRVLLFSTMTKLLDLLENYLKWR
WTTPDGADLKYCRIDGTTSLEQREVAINEFNAQHSDKFIFLLSIRAAGRGLNLQTADTVV
VYDPDPNPKNEEQAIARAHRIGQKREVRVIHFEAVDDAPNETQSPKDAPAGWGGPNRSYC
ESLESSVRNVIQKQKNEMAAEIVDAGRFDGQTTHAERRETLENLLQVQANGKRGDVNVPP
LHELNGRIARSKEEWDLFNRLDQELAWPGELMSSNECPPWIRYTQEELDKAVFATSKAAQ
SIIPEVDDTLGRGQRSVSKLNALDTSAVSQSAPIRSADDFIDRTGIVYQEEQSEDESDEE
VVGNDDAAGEDIGDIDIDKIEENDEDDEDETATINTMATGDTGEDSEEAMMTKPVNLKFT
MKRVVSEPEELSKRPRLD
NT seq 3657 nt   +upstreamnt  +downstreamnt
atggcgctcgacgccgcgcgtgcgtccgacgccggcgacgcccccacgcacagcggtaga
ggcgatggcgcgagcgagagcgaccgctccgacgctcgcctgcgccacgggaagatcggc
gaccgagacgtgtcgttcgtcctccagagctctttcgcgggaaatcagctcgatcgactg
aaggaacagatcgccatgctgcgaaagcttcgcgcgggtgagcggttcatcgcgccagga
tacggaggacgagggacgacgcgcgcgcggaaggagcggctattcggtcctctggacgtc
ggggtgggatacggattgaacgtcgacgcgaagacctacttcacgaacgcggagtggatg
tacgcgtacagggagctgccgttattcggacagctggcggacgtgcgatcgacggacgcg
gcgaaggcaaagtttgcgcgaaagcgggacggagatgaaagcgccgagctgacgctggga
gacgtgaaccgcgtcgtgacgcgaccggtggatagtttagagcgcgaagctaatcgagtt
ttggagcgggcgcgattgcgtgagctggagacgctgcggcggcgcctcgatcaagtcaat
aaccttgccaacatgcgggctgaacacagagcgcagcaaaagctacaattggaaatccgc
atcaagcagctcgagctcgtgcacgtgcaacaaagggtacgcaatgagctcattttagcg
cagcatgccataatgcacatgccagagcgtgcgtataaaaagatggtgaaagacgacatc
aaggttctcgcagagaagaagaagcaggctgagaagaaggagaaggcagagctgacagac
ttcttgcgcaatctgattgcgatgcgaaaacgcatgagtcaagaatcgagcactacgcgt
gacgagcgcatctcgaggaacagagcagtcgtgaaaatacacgaaaagttgaacagagaa
ttcatgcgcaaggcgcgcgatgagaactctgagcgtctcttgcgtttagaagcgctgaag
gcgaatgatctgaacgcttacagagaattactcgcagaagcgagagggcgtgagacagac
atggcggccgggggtgagggtgacaaatatgaggcgttgacgcagtttttgaacgccaca
gaaacatatttgaccaagttgggtgggaaaattgcggctgttaagatcgaacaagctcgt
tcagaagccgcggcggcggccgtgtctgaagccgagttgaagggcatgaacgaagacgaa
ctcaagatcatcgcggaggaagcggcgaacaacgcagctttagaaaacggcgaggcaatt
ctggatggtgctgttgccggaggggacacgaaggagcgatactacgccatggcacacagc
acgcaagagatcatcacgcatcagccgcgaatgctaacttttggacaacttcgcgattat
cagttggtctcgttgcagtggatgatctcgctttacaataacaagctcaacggtattcta
gcagatgagatgggtcttggtaagacggtgcaagtgtgtgcgttgattgcgtatttgttt
gaaagcaagcaaaactacggtccacacctgatcatcgtaccgaacgccgtcgtcgtgaac
tggaaagcggaaatcaagagatggttacccaagctgacttccgttttctacgtcggcaca
aaagatgcgcgcgccaaaatttttcagcaacaagtctcacaactgaagttcaacgtactg
gttacctcgtacgagttcatcatgcgagatcgatccaaacttagtaaagttgcgtggaag
tacatcattattgacgaagctcagcggttaaaagatcgagaaggacgtttgagccgagat
ttagataaatttaggtcgcaacgccgactgctcctcactggtacgccattgcaaaacgat
ctctcagagctgtggtccttacttaacttactgttaccggaagtgttcgactcgtccaag
gtgttccaagagtggttcgggacgcaaaagggcggcagtgatggtgtcgatgatgtagat
tggatcgaaagagaaaagaaggtcatcgttatcagtcgactgcatcaaattctcgagccg
ttcatgctcagaagacttgtacaggacgtggagagcaagctccctccgcgtatcacggtg
gtggttcactgtccgttcagtgctttccagtcggtctgctacgattggatccgtcaaact
gccaccgtgcgcgttgagcctggtactcgacttggtttggctgcacaacaaaatttccac
ggttacttgcccatccacaatagggcgatggagctgcgtaagctgtgcaaccatcccgca
ttgaactatccaccagagaaaggtggtgattttcgcggtccagatctcgtgcgtgcgtgt
ggtaagctctggatattggataggatactcgtcaaacttcagcactctgggcatcgcgtc
ttgttgttctcaacgatgacaaaactcctcgatctgctggaaaactacctgaagtggagg
tggacgaccccagacggcgcggatttgaagtattgtcgcatcgatggtacgacttcgttg
gaacaacgcgaagtcgccatcaatgaattcaacgcacaacacagtgataagtttattttt
ttgctctccatcagagctgctggtcgcggtctcaaccttcagaccgcagacacagtcgtg
gtttatgatcccgatccaaaccccaagaacgaagagcaggcgattgcgcgcgcgcaccgc
attggtcagaagcgagaagttcgcgttatccactttgaagcggtcgatgacgcgcccaat
gagacgcagtcgccaaaagatgctcccgcggggtggggagggccaaacagaagctactgc
gaatcgctcgagtcatccgttagaaacgtcattcaaaagcagaagaacgaaatggctgct
gagatcgtcgatgccggtcgatttgatggccaaacaacgcacgctgagcggcgtgagacg
ctcgaaaacctccttcaggtgcaagcgaatggcaaacgaggcgacgtaaatgttcctccc
ctccacgaattaaacggtagaatcgctcggtctaaggaggaatgggatttgttcaatcgt
ttagaccaagagcttgcgtggccgggtgagctcatgagttctaacgaatgtccgccatgg
atcagatacacgcaggaggaactcgacaaagcggtgttcgcaacgagcaaggcggcgcag
tcgatcattccagaagttgacgatacgctgggtcgaggtcagcgctctgtgagcaagctg
aacgcacttgatacttctgctgtgagtcagtccgctcccattcgttcggcggatgacttc
atcgatcgcacaggaattgtatatcaagaagagcaaagtgaagatgaatccgatgaagaa
gtcgtcgggaacgatgatgcggcgggggaggacattggcgacatcgacatcgacaaaatc
gaagaaaacgacgaagacgacgaggatgaaacggccacgataaacacgatggccacagga
gacaccggggaagatagcgaagaggcgatgatgacaaaaccggtcaacctgaaattcacg
atgaagcgcgttgtgagtgagccggaagaacttagtaaaagaccgcgactcgattag

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