Ostreococcus tauri: OT_ostta07g03900
Help
Entry
OT_ostta07g03900 CDS
T01358
Name
(RefSeq) SNF2-related
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ota
Ostreococcus tauri
Pathway
ota03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
OT_ostta07g03900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta07g03900
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta07g03900
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
OT_ostta07g03900
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
OT_ostta07g03900
Chromatin remodeling factors
BAF complex
OT_ostta07g03900
PBAF complex
OT_ostta07g03900
GBAF(ncBAF) complex
OT_ostta07g03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_14
DUF1440
DHC
AAA_22
Motif
Other DBs
NCBI-GeneID:
9836690
NCBI-ProteinID:
XP_022839498
OrcAE:
OT_ostta07g03900
UniProt:
A0A090M812
LinkDB
All DBs
Position
7:<633209..>636865
Genome browser
AA seq
1218 aa
AA seq
DB search
MALDAARASDAGDAPTHSGRGDGASESDRSDARLRHGKIGDRDVSFVLQSSFAGNQLDRL
KEQIAMLRKLRAGERFIAPGYGGRGTTRARKERLFGPLDVGVGYGLNVDAKTYFTNAEWM
YAYRELPLFGQLADVRSTDAAKAKFARKRDGDESAELTLGDVNRVVTRPVDSLEREANRV
LERARLRELETLRRRLDQVNNLANMRAEHRAQQKLQLEIRIKQLELVHVQQRVRNELILA
QHAIMHMPERAYKKMVKDDIKVLAEKKKQAEKKEKAELTDFLRNLIAMRKRMSQESSTTR
DERISRNRAVVKIHEKLNREFMRKARDENSERLLRLEALKANDLNAYRELLAEARGRETD
MAAGGEGDKYEALTQFLNATETYLTKLGGKIAAVKIEQARSEAAAAAVSEAELKGMNEDE
LKIIAEEAANNAALENGEAILDGAVAGGDTKERYYAMAHSTQEIITHQPRMLTFGQLRDY
QLVSLQWMISLYNNKLNGILADEMGLGKTVQVCALIAYLFESKQNYGPHLIIVPNAVVVN
WKAEIKRWLPKLTSVFYVGTKDARAKIFQQQVSQLKFNVLVTSYEFIMRDRSKLSKVAWK
YIIIDEAQRLKDREGRLSRDLDKFRSQRRLLLTGTPLQNDLSELWSLLNLLLPEVFDSSK
VFQEWFGTQKGGSDGVDDVDWIEREKKVIVISRLHQILEPFMLRRLVQDVESKLPPRITV
VVHCPFSAFQSVCYDWIRQTATVRVEPGTRLGLAAQQNFHGYLPIHNRAMELRKLCNHPA
LNYPPEKGGDFRGPDLVRACGKLWILDRILVKLQHSGHRVLLFSTMTKLLDLLENYLKWR
WTTPDGADLKYCRIDGTTSLEQREVAINEFNAQHSDKFIFLLSIRAAGRGLNLQTADTVV
VYDPDPNPKNEEQAIARAHRIGQKREVRVIHFEAVDDAPNETQSPKDAPAGWGGPNRSYC
ESLESSVRNVIQKQKNEMAAEIVDAGRFDGQTTHAERRETLENLLQVQANGKRGDVNVPP
LHELNGRIARSKEEWDLFNRLDQELAWPGELMSSNECPPWIRYTQEELDKAVFATSKAAQ
SIIPEVDDTLGRGQRSVSKLNALDTSAVSQSAPIRSADDFIDRTGIVYQEEQSEDESDEE
VVGNDDAAGEDIGDIDIDKIEENDEDDEDETATINTMATGDTGEDSEEAMMTKPVNLKFT
MKRVVSEPEELSKRPRLD
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgacgccgcgcgtgcgtccgacgccggcgacgcccccacgcacagcggtaga
ggcgatggcgcgagcgagagcgaccgctccgacgctcgcctgcgccacgggaagatcggc
gaccgagacgtgtcgttcgtcctccagagctctttcgcgggaaatcagctcgatcgactg
aaggaacagatcgccatgctgcgaaagcttcgcgcgggtgagcggttcatcgcgccagga
tacggaggacgagggacgacgcgcgcgcggaaggagcggctattcggtcctctggacgtc
ggggtgggatacggattgaacgtcgacgcgaagacctacttcacgaacgcggagtggatg
tacgcgtacagggagctgccgttattcggacagctggcggacgtgcgatcgacggacgcg
gcgaaggcaaagtttgcgcgaaagcgggacggagatgaaagcgccgagctgacgctggga
gacgtgaaccgcgtcgtgacgcgaccggtggatagtttagagcgcgaagctaatcgagtt
ttggagcgggcgcgattgcgtgagctggagacgctgcggcggcgcctcgatcaagtcaat
aaccttgccaacatgcgggctgaacacagagcgcagcaaaagctacaattggaaatccgc
atcaagcagctcgagctcgtgcacgtgcaacaaagggtacgcaatgagctcattttagcg
cagcatgccataatgcacatgccagagcgtgcgtataaaaagatggtgaaagacgacatc
aaggttctcgcagagaagaagaagcaggctgagaagaaggagaaggcagagctgacagac
ttcttgcgcaatctgattgcgatgcgaaaacgcatgagtcaagaatcgagcactacgcgt
gacgagcgcatctcgaggaacagagcagtcgtgaaaatacacgaaaagttgaacagagaa
ttcatgcgcaaggcgcgcgatgagaactctgagcgtctcttgcgtttagaagcgctgaag
gcgaatgatctgaacgcttacagagaattactcgcagaagcgagagggcgtgagacagac
atggcggccgggggtgagggtgacaaatatgaggcgttgacgcagtttttgaacgccaca
gaaacatatttgaccaagttgggtgggaaaattgcggctgttaagatcgaacaagctcgt
tcagaagccgcggcggcggccgtgtctgaagccgagttgaagggcatgaacgaagacgaa
ctcaagatcatcgcggaggaagcggcgaacaacgcagctttagaaaacggcgaggcaatt
ctggatggtgctgttgccggaggggacacgaaggagcgatactacgccatggcacacagc
acgcaagagatcatcacgcatcagccgcgaatgctaacttttggacaacttcgcgattat
cagttggtctcgttgcagtggatgatctcgctttacaataacaagctcaacggtattcta
gcagatgagatgggtcttggtaagacggtgcaagtgtgtgcgttgattgcgtatttgttt
gaaagcaagcaaaactacggtccacacctgatcatcgtaccgaacgccgtcgtcgtgaac
tggaaagcggaaatcaagagatggttacccaagctgacttccgttttctacgtcggcaca
aaagatgcgcgcgccaaaatttttcagcaacaagtctcacaactgaagttcaacgtactg
gttacctcgtacgagttcatcatgcgagatcgatccaaacttagtaaagttgcgtggaag
tacatcattattgacgaagctcagcggttaaaagatcgagaaggacgtttgagccgagat
ttagataaatttaggtcgcaacgccgactgctcctcactggtacgccattgcaaaacgat
ctctcagagctgtggtccttacttaacttactgttaccggaagtgttcgactcgtccaag
gtgttccaagagtggttcgggacgcaaaagggcggcagtgatggtgtcgatgatgtagat
tggatcgaaagagaaaagaaggtcatcgttatcagtcgactgcatcaaattctcgagccg
ttcatgctcagaagacttgtacaggacgtggagagcaagctccctccgcgtatcacggtg
gtggttcactgtccgttcagtgctttccagtcggtctgctacgattggatccgtcaaact
gccaccgtgcgcgttgagcctggtactcgacttggtttggctgcacaacaaaatttccac
ggttacttgcccatccacaatagggcgatggagctgcgtaagctgtgcaaccatcccgca
ttgaactatccaccagagaaaggtggtgattttcgcggtccagatctcgtgcgtgcgtgt
ggtaagctctggatattggataggatactcgtcaaacttcagcactctgggcatcgcgtc
ttgttgttctcaacgatgacaaaactcctcgatctgctggaaaactacctgaagtggagg
tggacgaccccagacggcgcggatttgaagtattgtcgcatcgatggtacgacttcgttg
gaacaacgcgaagtcgccatcaatgaattcaacgcacaacacagtgataagtttattttt
ttgctctccatcagagctgctggtcgcggtctcaaccttcagaccgcagacacagtcgtg
gtttatgatcccgatccaaaccccaagaacgaagagcaggcgattgcgcgcgcgcaccgc
attggtcagaagcgagaagttcgcgttatccactttgaagcggtcgatgacgcgcccaat
gagacgcagtcgccaaaagatgctcccgcggggtggggagggccaaacagaagctactgc
gaatcgctcgagtcatccgttagaaacgtcattcaaaagcagaagaacgaaatggctgct
gagatcgtcgatgccggtcgatttgatggccaaacaacgcacgctgagcggcgtgagacg
ctcgaaaacctccttcaggtgcaagcgaatggcaaacgaggcgacgtaaatgttcctccc
ctccacgaattaaacggtagaatcgctcggtctaaggaggaatgggatttgttcaatcgt
ttagaccaagagcttgcgtggccgggtgagctcatgagttctaacgaatgtccgccatgg
atcagatacacgcaggaggaactcgacaaagcggtgttcgcaacgagcaaggcggcgcag
tcgatcattccagaagttgacgatacgctgggtcgaggtcagcgctctgtgagcaagctg
aacgcacttgatacttctgctgtgagtcagtccgctcccattcgttcggcggatgacttc
atcgatcgcacaggaattgtatatcaagaagagcaaagtgaagatgaatccgatgaagaa
gtcgtcgggaacgatgatgcggcgggggaggacattggcgacatcgacatcgacaaaatc
gaagaaaacgacgaagacgacgaggatgaaacggccacgataaacacgatggccacagga
gacaccggggaagatagcgaagaggcgatgatgacaaaaccggtcaacctgaaattcacg
atgaagcgcgttgtgagtgagccggaagaacttagtaaaagaccgcgactcgattag
DBGET
integrated database retrieval system