Ostreococcus tauri: OT_ostta07g03910
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Entry
OT_ostta07g03910 CDS
T01358
Name
(RefSeq) WD40 repeat
KO
K11293
protein HIRA/HIR1
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta07g03910
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
OT_ostta07g03910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
Hira
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
eIF2A
Beta-prop_WDR11_1st
WD40_like
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
9836694
NCBI-ProteinID:
XP_003080485
OrcAE:
OT_ostta07g03910
UniProt:
A0A090N3W7
LinkDB
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Position
7:complement(636900..639674)
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AA seq
924 aa
AA seq
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MVVVYKPEFVTHDARAPVFSVDAAPCGSRFATAGGDQKVKVWALAPVLERAVEADADAPK
CLATLSDHFGPVNCVRFSKSGRYLASGSTDTSVLVYALRDGPGKAAFGSADEPNVENWTI
AMRYKGHDSDVIDIAWSPDDSMLASCSLDNLVIIWDCRTGNQVTTLRGHTSFVKGVAWDP
IGKFLATQSDDKTCIIWRTDDWTQVAKVEEPYQASMGATFSMRLCWSPDGKAVTTCNSYK
KPSHTASVLERGTWGSNFDFVGHKGPVVAVRFSPRLFHDENRDKVHTVIACGSQDCKLTI
WTTNRPKPVCIVRKCFSQSVVDLCWTPDGYTLLACSTDGTLCAYTFDQAEIGEALDNTDA
EAFLSETYGDIRRNRAPMLEDPTLLGFEAPRELNDAAQGVKTTPPPPKRIQPAPIRSSNA
TAPTSGVATISAQRETVSNDGRRRIVPVATAGPSAGTPVKAAPQRVQLQPLPTNAQGQMS
EAAPANALKRRIEPTAMNGGNGFKSTLSDQPAVKRVTLQPTQLNQAPAPLAATPAAEPQR
QQMATAATATTAMGVPPPLPVAPSPGTLHVQLVAPNLEADASSEVHAPLLLEAKNHERFA
DLVCSRGGKIKWTDRVECRATHVSGNQFFSAVALEDGSLQLYTPCGRRYMPSLLLPDRAA
FLVSGQDDSSLLIVTRDYKLLVWNVTVGKEKCSLEADCMALVRSSGRSGVALSQVRLSKC
GAPIFTFTNGHAYVYHSDLKTWARVADQSFLKSEFTSRLRQPGGSGVGEMQALQIGAARA
AAHMGPAALLQSGGQPPRRETGRHLEVLLSGSSMLNSSAEYRPWLAAYVRHLASECGDDP
TTMFVGAEAQLREICHEFLGPLSASSSVETWKSEIFGVKKRTLLREVIIPTIAANRSAQV
MVAEIVELLEAAESRETRNDLSIC
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcgtgtacaagcccgagttcgtgacgcacgacgcgcgcgcgcccgtgttctcc
gtggacgcggcgccgtgcgggagcagattcgcaaccgcgggcggggatcaaaaggtaaag
gtgtgggcgctcgcgcccgtgctcgaacgcgcggtggaggcggacgcggacgcgccgaag
tgcctggcgacgctgagcgatcacttcggaccggtgaactgcgtgcggttttcgaagagt
ggacggtacctcgcgagcgggtcgacggatacgagcgtgttggtgtacgcgctgagagac
ggaccgggaaaggcggcgttcgggagcgcggatgagccgaacgttgaaaattggacgatc
gcgatgaggtataagggacacgattcggacgtgatcgatatcgcgtggtcgcccgatgac
tcgatgttggcgtcgtgctcgctggataatctcgtaatcatatgggactgtcgaacgggg
aatcaggtcacgactctgcgaggacacacgagctttgtcaagggcgtggcgtgggatccg
ataggaaaatttttggcgacgcagagcgacgataagacgtgcataatctggcgcacggat
gattggacgcaggtagcaaaggttgaggagccgtaccaggcgtccatgggcgcaacgttt
tccatgcgcctgtgctggagcccggacgggaaggcggtgacgacgtgtaactcgtacaag
aagccatcgcacactgcgtcggttctcgagcgcggaacctgggggagtaactttgatttc
gtcggacataaaggcccggtggttgccgtgcggttctcgcctcggctcttccacgacgaa
aatcgggataaggtccacacggtcatcgcgtgtggttcgcaagattgcaagctcaccatc
tggaccacgaatagacctaaaccggtgtgcatcgttcgtaagtgcttctcccagtccgtg
gtggatttgtgctggactccagatgggtacacgttgctcgcgtgcagcactgacgggacg
ttgtgcgcgtacacatttgaccaagctgaaattggcgaggccctcgacaacaccgacgcc
gaggccttcttgtcggaaacgtacggagatatcagacgtaatcgggcgccgatgttggag
gatccaacgttgctcgggtttgaggcgccgcgagagctgaacgacgcagctcaaggtgtg
aagacgacaccaccaccacctaagaggattcagcccgcaccgatccgaagcagcaacgcc
acggcgccaacgagtggcgtggcgacgatctcggcgcaacgagagaccgtcagtaacgac
ggacgtcgacgcatcgtgccagtcgctaccgctggcccatcagctggtacgccagtgaag
gctgctccgcagcgcgttcaactccaacctttgccgacgaatgcgcaagggcaaatgtcg
gaggctgccccggcgaacgcattgaagcgaagaatagagcccactgcgatgaacggtggg
aatggattcaaaagtactttgtcggatcagcctgcggtgaagcgagtgaccttgcagccg
actcagctgaaccaagctccggcgccgctcgctgcaactcctgccgcggaaccacagcgc
caacagatggcgactgctgcgacggcgacgactgcgatgggtgtacctccgccgctgccg
gtggcgccgtcgcctggaacgttgcacgtccagcttgttgctcccaatttggaagcggat
gcttcgagcgaagtgcacgcgccgctccttcttgaggcaaaaaatcatgaacgattcgcg
gaccttgtgtgctcgagaggtggtaagatcaagtggacagatcgcgtcgaatgtcgagcc
acgcacgtgagtggtaaccaattcttcagcgccgtggcgcttgaagatgggtccctgcaa
ctttacactccgtgcggccgccgatacatgccatcgttgcttctgccagatcgtgccgca
ttcttggtttcggggcaagatgattcttcacttttgattgtgaccagagactacaaactt
ctggtgtggaatgtcaccgtgggtaaagagaagtgctcgctcgaggcggattgcatggct
ctcgtgcgtagctctggacgttccggtgtggctttgtctcaagttagattgtccaagtgt
ggagccccgatcttcacttttaccaacgggcacgcgtatgtgtatcacagtgatctcaaa
acatgggcccgtgtcgcagaccagagcttcttaaagtctgagttcacgtcccgacttcgt
caacctggtgggtctggcgttggagaaatgcaggctctgcaaattggcgccgcgcgggcg
gccgctcacatgggcccagccgcgctattgcagtccggtggacaaccaccgagaagggag
accggtagacatttggaagttctcctctctggctcgtccatgctcaactcatcggcagaa
tacaggccgtggcttgcggcgtacgtacgtcacctggcgagcgagtgtggcgacgatcca
actaccatgttcgtgggtgctgaagcgcaacttcgagagatttgccatgagttcctcgga
ccgctcagtgcttcctcctcggttgaaacgtggaagtcggagattttcggcgtcaagaag
cgtacactgcttcgagaggtgatcattcccaccatagctgcgaaccgaagtgcccaggtc
atggttgccgagatcgtcgagttgctcgaagccgcggagtcgagagaaacgaggaacgat
ttgtccatttgctag
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