KEGG   Ostreococcus tauri: OT_ostta08g01210
Entry
OT_ostta08g01210  CDS       T01358                                 
Name
(RefSeq) Restriction endonuclease type II-like
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ota  Ostreococcus tauri
Pathway
ota03420  Nucleotide excision repair
ota03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta08g01210
   03460 Fanconi anemia pathway
    OT_ostta08g01210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ota03032]
    OT_ostta08g01210
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta08g01210
DNA replication proteins [BR:ota03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    OT_ostta08g01210
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     OT_ostta08g01210
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 9831339
NCBI-ProteinID: XP_003080688
OrcAE: OT_ostta08g01210
UniProt: Q013S3
LinkDB
Position
8:complement(200121..203084)
AA seq 987 aa
MALVVASPSTSESVLDASSLLPFQRAIARDVLDRDGVIVMAEGLGAASIIAALCAVDDAL
LRERPLGERGRVTLIVGATDAIKVSVKERAEALFPGARPPLELTSETSGDARSKRYEDGC
VAFVTTRIASVDLLSGRLEAKRVRGVIVCNAHRATEVSGEGFVVRLFREGNRSGYVRAIS
DRPGDLTRGFSSVERCMKALMLTRVHLWPRFHLRVKEDLDATPPEVIELRQPLSENVLMI
QQAIVSVMDSCMSELKKSRYIDTSDLTLESGLFKSFDLILQRQLDKVWNVVPKRVKQIVY
DLKTLRLLADGLLKYDSVTFLKYLQTLRASESREAMWLFTEASHAIFEYAKKRVYLLRRK
AAAQPPKGLGKRALPTPVLGSDLVPVLEPMPKWTLVEEILDEIDEERRQGGELLAVAASE
TVIDLTFSQPYASQEFNDVDKTLKYKQGATLIVCKEEHVVQQLEFCIRYGAEALMRAHWT
DYLCNRGANNVAAQVAKRRGGVRTRGRDGGRGRRSGRGQPQQPQRRFSKLEAMQARIEGR
EVEDPALDLDGRTEESRLLATAAAEAKKSIICEKSREEKKAPQQVEVKPEHKEEALDLND
DEVIVIGETRTRSVVKRDTDSIFVYAHERKLNLLNRIRPSFVVMYDPDAAFIRELEVYQA
QHPEVTVKVYFMVYDTSLEEQKYLGSIKRESAAFENLIRTKQHMAVPAEQEGWTDSPNPL
PLSLPRSIARQRIEESREVSTRKGGGTLTIRSSLEIVVDMREFMSALPCVLHAAGFKVRP
TTLEVGDYILTPDICVERKAIPDLIQSFASGRLISQVEAMCKYYKTPVLLIEFDGEKAFA
LSAAADLPRFPGQNHIITKISMLAIQFPKLRMIWSRSMQMTAEVFASLKAIEPEPVLEVA
QRIGVPDADGDVYKLVQDDLNDMAVDLLRRLPGITDRNYRKVIAKVESIEKMCDLSEEEL
AAILEDARQAKTLHTFIHAPFAKDFID
NT seq 2964 nt   +upstreamnt  +downstreamnt
atggcgctcgtcgtcgcctcgccgtcgacgagcgaatccgtcctcgacgcgtcatccctc
ttacccttccaacgcgcgatcgcgcgcgatgtgttggacagagacggcgtcatcgtcatg
gcggagggactcggtgcggcgtcgataatcgccgcgctgtgcgccgtcgacgacgcgctg
ctgcgcgaacgaccgctcggtgaacgcggtcgcgtcactttgatcgtcggcgccacggat
gcgatcaaagtgagcgtgaaggagcgcgcggaggcgctgttccccggggcgcgaccgccg
ttggagctcacgagcgagacgagcggcgacgcgcggagtaagcggtacgaggatgggtgc
gtggcgttcgtgacgacgcgtatcgcgagcgtggatctgttgagtggaagattggaggcg
aagcgagtgcgaggggtgatcgtgtgcaacgcgcatcgagcgacggaggtctcgggagag
gggttcgtcgtgcggttgtttcgggaaggaaatcgaagcggatacgtgcgagcgatcagc
gatagaccgggagatttgacgagggggttcagtagtgtagagcgatgcatgaaggcgctg
atgttgacgcgcgtgcacctgtggccgcgttttcatttgcgggtgaaggaggatttggac
gcgacgcctccagaggtgatcgagctcaggcaaccgctcagtgaaaacgtcctgatgatt
cagcaggcgatagtgagcgtgatggattcatgcatgtcggagttaaagaagagtcggtac
attgacacgagtgatctaacgctcgagagtgggctgttcaagagtttcgatctgattttg
caacgacagcttgacaaggtgtggaacgtcgtgcccaagcgcgtgaaacaaatcgtatac
gatttgaaaaccttgcgcttgctcgcggacggactcttgaagtacgattcggtgacattt
ttaaagtatcttcagacgttgcgcgcgagcgaatcgcgggaggccatgtggttattcacc
gaggcttcgcacgcaatttttgagtatgcgaaaaaacgcgtgtacttactcagacgcaaa
gccgcggcgcagccgccgaaaggactcggcaagcgcgcgctcccgaccccagtcttgggt
tccgatctcgtcccagtcttggagccgatgccgaagtggacgctcgtggaggaaatttta
gatgaaatagacgaggagcgcaggcaaggaggcgagttactcgccgtcgccgcctcggaa
accgttatcgacttgactttttctcagccgtacgcgtctcaggaattcaacgatgtagac
aaaacgctgaagtacaagcaaggtgcgacgctgatagtgtgcaaagaagagcatgtcgtg
cagcagctggagttttgtattcgatacggcgctgaggctttgatgcgcgcgcactggacc
gattacctgtgtaatcgaggggcgaataacgtcgccgcgcaggttgcaaagcgccggggt
ggggttcgcacgaggggacgcgacggtgggcgtggcaggcgcagcggacgcggccagcca
caacaaccgcagcgcagattctccaaactcgaagccatgcaggcgcgaatagagggacgc
gaagtcgaagatcccgcgctcgatctagacggaagaaccgaggaaagcagactcctcgcc
accgccgcggctgaggcgaagaagtcaattatttgtgaaaagtcgagagaggagaagaag
gcgccgcagcaagtcgaagttaaacctgaacacaaggaggaggcgctcgatctcaatgac
gacgaagtcatcgtgattggcgagacgcgcacgcgctccgtggtgaaacgcgatacggac
agtattttcgtgtacgcgcacgaaagaaaacttaacctgctgaatcggatccggccttcg
ttcgtggtgatgtacgatcctgacgccgcgttcattcgcgaacttgaggtgtatcaggcg
caacacccagaggtgaccgtcaaggtgtatttcatggtatacgacacgtctctggaagaa
cagaaatacctggggagtatcaagcgcgagagcgcggcttttgaaaacttaatccgcacc
aagcagcacatggctgttcctgctgaacaagaaggatggaccgattcaccgaatccgctt
ccactgtcgctaccgaggtcgatcgcaagacaaagaatcgaggaatcgcgcgaggttagc
acacgaaaaggtggtggtacgctcacgattcgctcgtcactcgaaatcgtggtcgatatg
cgagagttcatgtccgcacttccgtgcgttctacacgccgccggattcaaggtgcgaccg
acaacgcttgaagtcggagactatattcttacgccggacatttgcgtcgagcgcaaagca
attccggatttgattcagtcctttgcctcgggacgattgatatcgcaggtggaggcgatg
tgcaagtattacaaaactccggtattgctaattgagtttgacggcgaaaaggcgttcgcg
ttgagcgcagccgccgacttgcctcgcttccccggtcagaaccacattatcacaaaaatc
agtatgctcgccattcagtttccgaagctacgaatgatttggagtcggtcgatgcagatg
acggctgaagttttcgcatccctcaaggcgatcgaacccgagcccgtgctcgaggtggcg
cagagaattggcgtcccagacgccgacggcgacgtgtacaaactcgtgcaagacgacctg
aatgatatggcagttgatttactccgccgacttcccggaatcaccgatagaaactataga
aaagtcatcgcaaaggttgagagcatagagaagatgtgcgacctgagcgaggaagaactc
gcggcgatactcgaagacgcaaggcaggcgaagacgcttcacaccttcatccacgccccg
ttcgcgaaagatttcatcgactga

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