Ostreococcus tauri: OT_ostta08g03320
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Entry
OT_ostta08g03320 CDS
T01358
Name
(RefSeq) Zinc finger, Sec23/Sec24-type
KO
K14006
protein transport protein SEC23
Organism
ota
Ostreococcus tauri
Pathway
ota04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
OT_ostta08g03320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta08g03320
Membrane trafficking [BR:
ota04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
OT_ostta08g03320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
VWA_2
HVO_0758
Vps36-NZF-N
VWA
Motif
Other DBs
NCBI-GeneID:
9831470
NCBI-ProteinID:
XP_003080891
OrcAE:
OT_ostta08g03320
UniProt:
Q012X1
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All DBs
Position
8:complement(<564234..>566624)
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AA seq
796 aa
AA seq
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MEGYDGNQAYGAHAAPQAVDWGALEARDGARFSWNVVANSRAEMTKCVVPFGAVVTPRKA
IAEDVVPKVPYEPVRCKGCGGALNPYARVDFASKIWVCPLCHARNHFPPHYGGLSETNLP
AELFPSYTTIEYAMPSRASGVASGSGYLFVVDACVEEDELRAVKQAVTQALSLMPEDARV
GLVTFGTHVHVHELGFESCPKSYVFRGNKEFTTQQVKDQLALGGGPLRAVNGARGQPAQG
HVNGAMPASRFLVPLSECEFQLSAILEELNRDAFAPLPSCRRARCTGTALMVASCLLATG
AIGQSARAMLFTGGAATEGGGTIVAKDMEQAVRSHKDIVKGAAPFYAKAKKYYEQVAVNL
CANGHVLDVFACALDQVGLAEMKVCVEKTGGNVVLAESFSHTVFKTSFLKLFAPDTEGGL
GIAYNGQFEVVTSRDVKTSGVIGPCAALDRKGLPGAVSDSPIGSGGTTAWKMCTLTNETS
LAVYFEVANPGGKDQQSMAMQGQHAQQFFVQFLCTFTLPNGESRMRVITTSRRWTDGQNL
NDIAAGFDQEAAAVLVARQLSWKMETEEETDCPAATRWLDRKLIALCQRFGNYRKDDPHS
FQLMPQFSIYPQFMFNLRRSQFVQVFNNSPDETAYFRMILQRENVYNSLVMIQPTLTSYS
FNGPPEPVLLDVCSIAADRILVLDAYFTVVVFHGMTIAQWRKANYQDQPEHVAFKELLAA
PRVEADQILASRFPVPRLIDCDQHGSQARFLLAKLNPSATYNSSASMGGGSDIIFTDDVS
LQVFLDHLKRLAVADN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtacgacgggaatcaagcgtatggcgcccacgcggcgccccaggccgtggac
tggggcgccctggaggctcgagacggcgcgcgtttctcgtggaacgttgtcgcgaacagc
cgcgccgagatgacgaagtgcgtcgtcccgttcggtgccgtcgtcacgccgaggaaagcg
atcgccgaagacgtcgtgccaaaggtaccgtacgaaccggtgcggtgtaaggggtgcggg
ggggcgctgaatccgtacgctagggtggatttcgcgtctaagatctgggtgtgtccgttg
tgtcacgcgcggaaccattttccaccgcattacggtggattgtccgagacgaacctgccg
gcggagttgttcccgagttacacgacgattgagtacgcgatgccgtcgagggcgagcggt
gtggcgagcgggagcgggtacctatttgtcgtggacgcgtgcgtggaggaggacgagctc
agagcggtgaagcaggcggtgacgcaagctttgagtctgatgccggaagacgccagggtg
gggttggtgacgttcgggacgcacgtgcacgtgcatgagttggggttcgagagttgtccg
aagtcgtacgtgtttcgagggaataaggagtttacgacgcagcaggttaaggatcagttg
gcgctcggcggtggaccattgcgggcagtgaacggggcgcgtgggcaaccggcgcaaggg
cacgtgaatggggcgatgccagcgtcgaggtttttggtgcccctgagcgagtgtgagttt
cagctttcggcgattctcgaggagttgaatcgagacgcgttcgcgccgttgccttcgtgc
agacgcgctcggtgcacaggtacggcgctcatggtggcctcgtgtctgctcgcgactggt
gcgatcggtcagagcgcgcgggcaatgctgttcaccggcggcgccgcgaccgagggcggc
ggtaccatcgtggcgaaggacatggagcaggcggtgcgatctcacaaggacatagtcaag
ggcgcggcgccattttacgcaaaggcgaaaaagtattacgagcaggtggccgtcaacttg
tgcgcgaacggtcacgtcctggatgtattcgcatgcgcgctcgaccaggttggattagcc
gagatgaaggtatgcgtcgagaagacgggcgggaacgtcgtattagcggagtcgttctcg
cacaccgtcttcaagacgtccttcttgaaactgttcgccccagatacggaaggcgggctc
ggaattgcgtataacggccagttcgaggtggtgaccagtcgcgacgtcaagacctcgggc
gtgatcgggccttgcgcggcgttggataggaaaggcttgccgggcgcggtgagtgactcg
ccgatcggcagcggcggcacgacagcatggaagatgtgcacgctaacgaacgagacctcg
ctcgcggtgtacttcgaggtcgcgaacccgggtggaaaggatcagcaatcgatggcgatg
cagggtcagcacgcacaacagttcttcgtgcagttcctttgcaccttcacgcttccaaac
ggcgagtcgagaatgcgtgtcatcacaacgagtcgacgatggaccgacggtcagaactta
aacgacatcgcggctggattcgatcaagaagccgcggccgttctcgtggctcgacagcta
tcgtggaagatggagacggaagaggagacggattgtccggcggccacgcgctggctcgat
cgcaagctcatcgcgctctgccagcgctttggcaactacagaaaggatgatccacattct
ttccagcttatgccgcagtttagcatatatcctcagttcatgttcaacttgcggcggtca
cagtttgtccaagttttcaataactcgccggatgagactgcgtatttccgaatgatctta
cagcgtgaaaatgtctacaactcgctggtgatgattcagcccacgctgacgtcgtacagc
ttcaacggcccaccagagccggttttgttagatgtttgttcgatcgctgcggatcgaatc
ttggtgctcgatgcttactttactgtcgtcgtgtttcacgggatgactatcgcgcagtgg
agaaaggcaaactatcaagaccaaccagagcacgtggcgttcaaggagctgcttgccgcg
cccagggtagaggcggatcagatactcgccagtagatttcctgtaccgcgattgatcgat
tgcgatcaacacggttcgcaggcgcggttcttgctggcgaagctgaatccgagcgcaacg
tacaatagcagcgcgtcaatgggtggcggatcggatatcattttcacagatgacgtgtcc
ttgcaagtgttccttgaccaccttaagcgcttagcggtggcagacaactga
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