Ostreococcus tauri: OT_ostta09g00660
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Entry
OT_ostta09g00660 CDS
T01358
Name
(RefSeq) Vacuolar protein sorting-associated protein 54
KO
K23288
syndetin
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta09g00660
Membrane trafficking [BR:
ota04131
]
Protein recycling
Others
EARP complex
OT_ostta09g00660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Motif
Other DBs
NCBI-GeneID:
9833495
NCBI-ProteinID:
XP_003081058
OrcAE:
OT_ostta09g00660
UniProt:
A0A090M423
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Position
9:94658..97555
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AA seq
965 aa
AA seq
DB search
MGFAERMEEIKGKAKEMRDRARIIMSSPNGRSGMSNDGETASPASVSPASFAQSLSPRRV
DAVDVRTTRDEAAGVELVMEEGSLVAGVERGYFDEPSTSEPTFDPVLVSLRRLGADFTVE
DLSKEEERLSELADRVSSALNREIMAHGEDFEKGMENITKIYDTLEAAGVLLKNSRRSLQ
RVGSDVKSALRVQGSHTTKGSIIETLRILEDIKFCQTCEIKIRSRLDASDYAEAMTLYSK
AWSILEGMHGLKCTYTLREDFVALRWELATCVDNVLIDLCGTFDAEKFAKLYEQYPKLGH
EVKHLADKIQDAFLKAVEVQTEGMLRLHAMLAQDEEIEAKRKSRMGYKQLCSQLSSMQFV
PCLRKTLESLHEIFLSSYRMTAWCQAAMQDTIDLSNAEAINTCSALIAALQINRKPIVEM
ASVRLAALLQSSGPPSNAAFREVFDLCRVFITCAEAFCGEESQTLRAQLERIGDRYFESL
HSARLDASKTIFESERWIPVSMDAVKRVRDDLRSAMQRKKATINGLGKTLGDTAITTFNS
DQILDSESFVRFIHQPNPFIATGQSNESVATNAEASRADNGVDAVDMSTSVSTEDFASNG
EHEHACDGDDVGLDRAGVKITASSLYILQGIVEYTVLMQVMRPSVPVIFNGICQLFELAL
VKTFNAFGRTEGLLPDSYDMTPRLRGTLSRLGNSGGVMAIRVTAPSQGDEDILSSGNLYG
LKERGIAIESLARVADEFKRIKSRVKRSLPLKDAASADRFYSHTVAAVEDLREHVYKNVA
SLLLNIGFCAEAIGDGDPNFALVNSTFAGKYNLREAPKRQSKWVDDVSAELLQFTTKLAV
ADVAPEALAVLWGQAASLLEHVLVDGFSRVKKCTDAGRALMSLDIQTLRAEFTKLAPSGT
STEWLFVTAYIDAFFIPEHDFPKWLVIHPEYTKSQKLSLVHQASAGRRWSAKLRADSIAA
IEADP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgcggagaggatggaggaaatcaagggtaaagcaaaggagatgcgagatcgc
gcgaggataatcatgagctcgccaaacgggaggagtgggatgtcaaacgatggggagact
gcgtcgccggcgagcgtctctccagcgtccttcgctcagtctctgtcaccgcgccgtgtc
gatgcggtggacgttcgaacgacgagagacgaagccgcgggtgttgaattagtgatggaa
gagggttcgctcgtcgctggagtcgagcgcgggtactttgacgaaccgtcgacgagcgag
ccgacattcgatcccgtgttggtctcattgcgacgcctaggcgcagatttcacggtggag
gacctgagtaaggaggaagagagattatccgagcttgctgatagagtatcttcggcgctg
aatagagagatcatggcgcacggcgaagattttgagaagggcatggagaacatcacaaag
atttacgatacgcttgaagccgcgggagtgttgttgaagaattctcgacgctcgctccag
cgcgtgggatcggacgtgaagagtgcgctacgagtacaaggctcgcacacgacgaagggt
tcgattatcgagacgcttcggattctggaggacataaagttctgtcagacgtgcgagata
aaaattcgctctcgattagacgcatcagattatgcagaggccatgacgttgtactccaag
gcttggagtattttagagggtatgcatgggttgaaatgcacgtacacgctccgagaagac
ttcgtcgctctacgatgggagctcgcgacgtgtgttgataacgtattgattgatttgtgc
ggcacgtttgacgcggaaaagtttgcaaagctttacgaacagtatccgaaactcggtcac
gaggtgaagcacttggccgataagattcaggacgcgttcctcaaggcggtggaagtccaa
acagagggaatgttgcgcctgcatgccatgctggcgcaagatgaagagatcgaagcgaag
agaaagagcaggatgggttacaagcagctctgttcgcagctctcatcgatgcaattcgtg
ccatgtctgcgaaagacgctcgagtccttgcatgaaatatttttatcgtcatacaggatg
acggcctggtgtcaggcggcgatgcaagataccatcgatttgtcgaatgctgaggcgatc
aacacatgtagcgctcttatcgcggcgctgcaaataaatcgcaagcccatcgtggaaatg
gcaagcgttcgactcgcagcgttgctgcagtcctctggcccaccgagtaacgcggcgttc
cgagaggttttcgatttgtgtcgcgtattcatcacgtgcgccgaggctttctgcggcgag
gaatcgcagacgctgcgtgcgcaactggaacgaatcggtgatagatactttgaatctctt
cacagcgccagactcgacgcgtccaagacgatctttgagagtgagcgatggattcccgta
tcgatggatgccgtgaaacgggtccgagacgatctgaggagcgccatgcagcggaagaaa
gcgacgattaacggccttggcaagactttaggcgacacagccatcacaacgttcaactcg
gaccagatcctggattcggaatcgttcgtgaggttcattcatcagccgaatcctttcatt
gcaacgggacagtccaatgaatccgtggcaacaaacgcggaagcgtctcgcgcagacaac
ggcgtcgacgctgtcgatatgtctacgagcgtatcgacggaggatttcgcctcgaacgga
gagcatgagcacgcatgcgatggagacgacgtcggtttggaccgagcgggggtcaaaatc
accgcgtcatcgctgtacattcttcagggcatcgtcgagtacaccgtgctcatgcaagtg
atgcgtccgagcgtgccggtcattttcaatggcatctgtcagctcttcgagctagccctc
gtgaagactttcaatgcgttcggtcgtaccgaaggtttacttcctgactcttacgatatg
acgccacgacttcgtgggacactgtccagactcgggaactcgggtggcgttatggcgatt
cgtgtgacggcgccgagtcaaggcgacgaggacatcttgtcgagcggaaatttatacgga
ttaaaagagcgaggcatcgcgatagagtcgctcgcacgcgttgctgacgagttcaagcgc
atcaagtctcgcgtgaagcggtcgcttccgttgaaggatgccgcctcggcggatcgcttt
tactcgcacaccgtcgcggctgtggaagatttgcgcgagcatgtgtacaagaacgtcgcc
tcattacttttgaacataggtttttgtgcggaggctatcggggacggcgatccgaacttt
gccttggtgaactcgacgttcgccggcaagtacaacttgcgcgaggcgccgaaacgccag
agcaaatgggtagacgacgtatcggccgagctcttgcagtttaccacgaaactcgccgtc
gcggacgtcgcccccgaggccttagccgtgctctggggccaagccgcgagcttgctcgag
cacgtcctcgtcgacggcttcagcagggtgaagaagtgcacggacgccgggcgcgcgctc
atgtcgctcgacatccaaaccttgcgcgccgagttcaccaagctcgccccttccggaacc
tccaccgagtggctctttgtcaccgcctacattgacgcattcttcatccccgagcacgac
ttcccgaagtggctcgtgatccaccccgagtacaccaagtcgcagaagctctctctcgtg
caccaagcgagcgccgggcgtcgatggtccgccaagctcagagccgactccatcgccgcc
atcgaggccgatccgtga
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