Ostreococcus tauri: OT_ostta09g00750
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Entry
OT_ostta09g00750 CDS
T01358
Name
(RefSeq) Ubiquitin fusion degradation protein UFD1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ota
Ostreococcus tauri
Pathway
ota04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
OT_ostta09g00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta09g00750
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
OT_ostta09g00750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
DUF3378
Motif
Other DBs
NCBI-GeneID:
9831938
NCBI-ProteinID:
XP_003081069
OrcAE:
OT_ostta09g00750
UniProt:
Q012E2
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Position
9:<109205..>110269
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AA seq
354 aa
AA seq
DB search
MFGRFGAPRGFTASYRVYPVSFIDRPQVELGDKAIMPPSALERLTRMQIDEFPMTFEVEN
AKRGRKTHCGVLEFVADEGVVYLPYWMMQNLLLEEGDVVKFTYASPPKGTYVKLQPQTKD
FLDISNPKAVLEMTLRNYTCLTVGDTFVIHYNNKKYYMDVVEAKPGDAIGVVDTDCEVDF
APPLDYVDPYGPDNTKFEDTNSGAINAPKKEEVAGDDAGASTSGAETSVEPKTKTFLAFA
GGGRRLDGKSISEIAPVEVEIPTTSLRVTKEWQQLRQGGVLGGETSKEPEQPNPDGDIDR
KRSGKVVFGGARAAAIARKKEKAAAAKKDDAPEKSDAKPTSSFEAFKGTGNKLR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacgattcggcgccccgaggggattcaccgcgagttatcgcgtctaccccgtg
agcttcatcgaccgcccgcaggtggagctcggagacaaggcgatcatgcccccgagcgcg
ctggagcggttgactcgaatgcagatcgatgagttcccgatgacgttcgaggttgagaac
gcgaagcgtggacggaagacgcactgtggggtgcttgagttcgtcgcggacgagggcgtg
gtgtacctgccgtactggatgatgcaaaatttgttactggaggagggggacgtggtgaag
tttacgtacgcgtcgccgccgaagggtacgtacgtgaaattacagccgcagacgaaggat
ttcttggacatctcgaacccgaaggcggtgttggagatgacgttgaggaattacacctgt
ctcacggtcggggatacgttcgttattcattacaataacaagaagtattacatggatgtg
gtggaggcaaaaccgggagacgccatcggagtcgtggacaccgattgcgaggtcgatttc
gcgcctccgttggattacgtcgacccttacggtcccgataacacgaaatttgaggataca
aactccggggcgatcaacgcgccgaagaaggaggaagtcgcgggtgacgacgccggcgcg
tccacgtcgggcgctgagacgagcgtggaaccaaagacaaagactttcctggcgttcgcg
ggcggtggacgccgattggacggcaagtctatctccgagatcgctccggtggaggtggag
attcccacgacgtcgcttcgcgtgaccaaggagtggcaacaacttcgtcagggcggcgtc
ctcggcggagagacgagcaaggaacccgagcagcccaatccggacggcgacatcgaccgc
aagcgcagcggcaaggttgttttcggcggcgcgcgcgcggccgcaatcgcgcgcaagaag
gaaaaggcggcggcggcgaaaaaagacgatgcgcccgaaaagagcgacgccaagccgacg
tcctcgtttgaagccttcaagggcaccgggaacaagctgcgatga
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