Ostreococcus tauri: OT_ostta09g00990
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Entry
OT_ostta09g00990 CDS
T01358
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
KO
K10755
replication factor C subunit 2/4
Organism
ota
Ostreococcus tauri
Pathway
ota03030
DNA replication
ota03410
Base excision repair
ota03420
Nucleotide excision repair
ota03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OT_ostta09g00990
03410 Base excision repair
OT_ostta09g00990
03420 Nucleotide excision repair
OT_ostta09g00990
03430 Mismatch repair
OT_ostta09g00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ota03032
]
OT_ostta09g00990
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta09g00990
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta09g00990
DNA replication proteins [BR:
ota03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
OT_ostta09g00990
DNA Replication Termination Factors
ELG1-RFC complex
OT_ostta09g00990
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
OT_ostta09g00990
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
OT_ostta09g00990
Check point factors
HRAD17(Rad24)-RFC complex
OT_ostta09g00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
RuvB_N
AAA_22
AAA_16
Mg_chelatase
AAA_11
AAA_5
AAA_24
Cdc6_lid
ResIII
SLFN-g3_helicase
AAA_14
AAA_28
nSTAND3
AAA_30
ATPase_2
AAA_3
AAA_assoc_2
RNA_helicase
AAA_2
Parvo_NS1
TIP49
PhoH
AAA_25
AAA_7
AAA_19
AAA_18
DNA_pol3_gamma3
IstB_IS21
bpMoxR
Viral_helicase1
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
9831963
NCBI-ProteinID:
XP_003081094
OrcAE:
OT_ostta09g00990
UniProt:
Q012B7
LinkDB
All DBs
Position
9:complement(144776..145804)
Genome browser
AA seq
342 aa
AA seq
DB search
MTVEHGARDARSTAHQPWVEKYRPKTVRDVASQEQVVRVLEQALETGNMPHCLFYGPPGT
GKTTCALAIAKQLYGPELYKQRVKELNASDERGISVVRDKVKTFASLAVGAPAPGYPSPP
YKILILDEADAMTTDAQSAMRRMMETYSKVTRFFLLCNYVTKIIDPITSRCAKFRFQPLA
LETMTTRLKYIAEQESLELSDDVFPACSKHSGGDMRKAITLLQSAARLFSGKVDAAGIVE
VAGYIPDVKLTTLLDLCKSGDFDKAQAHMEDILRDGYSGIKIMDQLSDIVLEADCSDEIK
GDIFMKMGEVDRALAQGADEGLQLATVVSSAIKSFEKYPVAA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgagcacggcgcccgggacgcgcgctcgaccgcgcatcaaccgtgggtggag
aagtaccgaccgaagacggtgcgcgacgtggcgagccaagagcaggtggtgcgggtgctg
gaacaagcgctggagacggggaacatgccgcactgcctgttctacggaccgccgggcacg
gggaagacgacgtgcgcgttggcgatcgcaaagcaactctacggacccgagctgtacaag
cagcgagtgaaggaattgaacgcctcggacgagcgagggatctcggtggtgcgggataag
gtgaagacgttcgcttcgctcgctgtcggggcgccggcaccggggtatccgtcgccgccg
tataagattttgattttagacgaggcggatgccatgacgacggacgcgcagtccgccatg
cgaagaatgatggagacgtactccaaggtcactcgattctttctcttgtgcaactacgtg
acgaaaatcatcgatccgatcacgagtcggtgcgccaagtttaggttccaaccgctcgcc
ctggagacgatgacgactcgtttgaagtacatcgccgagcaggagagcctggagttgtcc
gacgatgtgttccctgcgtgctccaagcactcgggtggggacatgcgcaaggcgattacg
ctcttgcagagcgctgctcggttgttttcgggcaaggtggacgccgcgggcatcgtcgag
gttgctggttacatcccggatgtgaagttgacgacgctccttgacttgtgcaaatcgggg
gactttgacaaggcgcaggcccacatggaggatattttgcgcgatggttattccgggatc
aaaatcatggaccagttgtctgacatcgtgctggaagccgattgctcggacgagatcaag
ggggacattttcatgaagatgggagaggtggacagggctttggcgcaaggcgctgacgaa
ggtctgcagctggcgaccgtggtgagcagcgcgatcaaatccttcgagaaatatcccgtc
gcagcttag
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integrated database retrieval system
