Ostreococcus tauri: OT_ostta09g01700
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Entry
OT_ostta09g01700 CDS
T01358
Name
(RefSeq) Clathrin, heavy chain/VPS, 7-fold repeat
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ota
Ostreococcus tauri
Pathway
ota04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
OT_ostta09g01700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta09g01700
Membrane trafficking [BR:
ota04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
OT_ostta09g01700
Hops complex
OT_ostta09g01700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
Rx_N
zf_RING_Vps8_fungal
PhaP_Bmeg
Motif
Other DBs
NCBI-GeneID:
9831735
NCBI-ProteinID:
XP_003081157
OrcAE:
OT_ostta09g01700
UniProt:
A0A090M452
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Position
9:249480..252833
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AA seq
1117 aa
AA seq
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MRALPAGASALFDDGAKKETYERFRDRARDRSDARVDRGAADADVFTDDATTMKDPKDDA
RDGCEGARPRFAASNVGERPGGPGASTSEARYVVGVIRGRTWTMSDGWNAASGTFAAESE
SLDVDGSKRIFRAGEDGGVKFVCADDWSGEHVMILGRESVEASTEGAWYRHARWASGGGA
RRIEGLRGVECSCATFVKYASSGESSGSGAGTIVRALVGTADGRVFDVRIDYSSDGKRFE
QACERVFETKDCEKIAGVRAFKRGRGVDSRHGALISTSRRLYALVGSYSLESVFAKARAK
PGGIDAVVEMPVASDTSELCVWQRRRKSPSSSSDCMAWLTGAGIYRGTLNFNVDDASSVL
EQHGVLPFPQTDADDVGPISLAMTEHHILLLYSKSLIAVNAITGDVEGKIQLPSGGASTF
ACTDPTTAVAYVANERNLLQIVITNEDANVWRVHCDLHDYEQAIAACKSELQRQFVFTHK
AERMMKMKRYEDAAEAFARASHAHSIEDVAKTFIDLNARDALYAYIEGRLRELPSDDVAR
RLILATWLLEERLKLASVSRDAKNDAKLRDFLREYFDSLDERETLRMLSEAKRLDDEMYF
AELCGDFDRVLDHFMQLGDSRRALEIITSQRVPRETSNRVLPALIERLPKETIDFLLSRG
QVSEDMKIIGPLAREERLFDKSSDAAKTILTHLARYLETITAKENGMARSDAAAHNLLLN
LYVSQIDSSPTVVTTLNRYILGAVDEGTKEPFYDVQYAIRMCEKHGAHRSAVYAYCMSRN
YDMAMHIALSTLQDIELAKMVTVKAAEAPSGDSNEDEIVQKKLWIEIAKWSIQKSGVLQQ
HANSESEEERSSAIRGALSFLNETNGALRVEDILPLLPDFTVIDDVKDLVLKSLTEHRSE
IEHLREELERITAFTQDVQDEIEDLEQKTYIVKKDQKCLECGRPVVRLRLMEHADDANLL
APFYVFPCEMAYHTECLIRRVLPLMFPDERKRALALMRLLKVPLPRRLKPETKFWGAPPK
AATGLTAEEAVGELEDMLCADCPDCGALHLRLIHEPLLTPEEQALDDALAAQLPESWLDP
FEAEVDFDSDPVEVIPWEEFKEIKLPDGWPDHEFFRS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcttcccgcgggcgcgtccgcgctcttcgacgacggggcgaagaaagagacg
tacgaacggtttcgtgatcgcgcgcgcgaccgttcggacgcgcgcgtggaccgcggagcg
gcggatgcggacgtgttcacggatgatgcaacgacgatgaaggatccaaaggacgacgcg
cgggatgggtgcgagggcgcgcgaccgcgattcgcggcgtcgaacgtcggtgaacgccct
ggtggacccggggcgtcgacgtcggaggcgaggtacgtcgtaggggtgattcgtggacga
acgtggacgatgagcgacggttggaacgcggcgagcgggacgttcgccgcggagagcgaa
tcgttggatgtcgatggatcgaagcgaatatttcgcgctggtgaggacggtggcgtgaag
tttgtgtgcgcggacgattggtcgggggagcacgtgatgattctcgggagagagagcgta
gaggcgtcgacggagggcgcgtggtacagacacgcgcgttgggcgagcggcggcggggcg
cgaaggatagagggattgaggggggtcgaatgctcgtgcgcgacgttcgtgaagtatgcg
agctcgggtgagagcagtggaagcggcgctgggacgatcgtgcgggcgctcgtggggacg
gcagatggtagagtgttcgacgtgcgcatcgattactcgagcgacggaaagcgatttgag
caagcgtgtgagcgcgtgttcgagacgaaagactgcgagaagatcgctggagtgcgagcg
ttcaaacgcgggcgaggagtggacagtcgtcacggtgcgttgatctcgacttcgcgcagg
ttgtatgctttggttggatcatactcgttggagtcagtttttgccaaggcccgcgcgaaa
ccgggcggcatcgacgcggtagtagagatgccggtagcgagcgatacgagtgagctgtgc
gtttggcaacgtcgtcgtaaatcaccgtcctcttcatccgattgcatggcgtggcttaca
ggcgctggaatctaccgggggacgttgaattttaacgtcgacgacgcgtcaagtgtcttg
gagcaacacggtgtgcttccgtttccgcaaacggacgccgacgacgtgggaccaatttct
ctcgccatgacagagcatcatattttgctgctctattcaaaatccttgatcgccgtcaac
gccatcacgggcgacgtggagggaaagatccagcttccgtcaggcggcgcgtccaccttc
gcgtgcacagatccaacgacggctgtagcgtacgtcgcaaacgaacgaaatttgcttcaa
atcgtcatcaccaacgaggacgccaacgtctggcgcgttcactgtgacttgcacgattat
gaacaggcaatagcagcgtgcaagtctgagctacagaggcagtttgtgttcacgcacaag
gcggagcgcatgatgaagatgaagcggtacgaagacgccgcagaggcctttgctagagcc
agtcacgcgcactcgatcgaagacgtggcgaagacgttcatcgatctgaacgcgcgagat
gccctctatgcatacattgagggacggctccgagagctcccaagtgatgacgtggcacga
cgcttgatactcgccacatggcttctggaggagcgtctcaagctcgcgagcgtttcgcga
gatgcaaaaaacgacgccaaacttcgtgacttcttgcgagaatacttcgattcgctggac
gagcgagagacgcttcgcatgttgagcgaggcaaaacgcttggacgacgagatgtacttc
gctgagctgtgcggcgatttcgacagagttttggaccactttatgcagctcggcgattcg
aggagggcgctagaaatcatcacttcgcagagggtgccgcgcgaaacgtctaaccgcgtc
ttgccagccctgattgagcgtctgccgaaggagacaatcgactttctactctcgcgtgga
caagtaagcgaggacatgaaaataattggcccactagctcgcgaagagaggttgttcgac
aagtcaagtgacgccgcaaagactatcttgacgcacttagcaagatatttggaaaccatc
acggcgaaagagaacggcatggcgcgaagcgacgccgccgctcacaatttgttgctcaac
ttgtatgtgagtcaaattgactcatcaccgaccgtcgtgacgacgttaaatagatacatc
ctcggcgcggtggatgaaggcacaaaagagccgttctacgacgtgcagtacgcaattcgc
atgtgcgaaaaacacggcgcgcatcgtagtgcggtctacgcgtattgcatgtcaaggaat
tacgacatggcgatgcatatcgcgctctcgacgcttcaagacatcgaactggcgaagatg
gtcaccgtgaaagctgccgaggcgccgtcgggagattcgaacgaggacgaaatcgtgcag
aagaagttgtggatagagattgcgaagtggtccattcaaaagtctggcgttctgcaacag
catgcgaactcagagagtgaggaagagcgtagttccgcaattcgcggcgctttgagtttt
ctgaatgagactaatggtgcgttacgcgtggaagatatccttccgctgcttccagacttc
accgtcatcgacgacgtcaaggatttggtgttaaagtcgctcacagagcatcgatcagag
atcgagcatttgcgagaagaactcgaacgtatcaccgcgttcacgcaagatgtacaagat
gagatagaggatctcgaacaaaagacgtacatcgtcaagaaagatcagaagtgtctcgag
tgcggcaggcccgtcgtccgtttgcgtctcatggagcacgcggatgatgcaaatctcctt
gcgccattttatgttttcccgtgtgagatggcatatcacacggagtgcttgatacgacga
gtgcttccactcatgttcccagacgagcgtaaacgcgcgctcgctttgatgcgtttgctc
aaggtgccgctgccacgtcggctcaagcccgagactaaattctggggcgcccctccaaag
gcggcgaccggactcaccgctgaagaagccgtgggagagcttgaggatatgctttgtgcc
gattgtcccgattgtggcgctttacaccttcgtctaatccacgaacctctgctcactcca
gaggagcaggcgctcgacgatgcgctcgccgcgcagcttccagagtcctggcttgatccg
ttcgaggctgaggtcgatttcgattcggaccctgtcgaagtgattccgtgggaggagttc
aaagaaatcaagctcccggacggatggcccgaccacgaattctttcgttcctag
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