Ostreococcus tauri: OT_ostta09g04280
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Entry
OT_ostta09g04280 CDS
T01358
Name
(RefSeq) DNA-directed DNA polymerase X
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ota
Ostreococcus tauri
Pathway
ota03410
Base excision repair
ota03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OT_ostta09g04280
03450 Non-homologous end-joining
OT_ostta09g04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta09g04280
Enzymes [BR:
ota01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OT_ostta09g04280
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
OT_ostta09g04280
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
OT_ostta09g04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
BRCT
LIG3_BRCT
PTCB-BRCT
DUF4332
NTP_transf_2
Cdd1
HHH
PPI_Ypi1
Motif
Other DBs
NCBI-GeneID:
9831839
NCBI-ProteinID:
XP_003081413
OrcAE:
OT_ostta09g04280
UniProt:
A0A090N445
LinkDB
All DBs
Position
9:complement(675005..677011)
Genome browser
AA seq
668 aa
AA seq
DB search
MDALHADEDTLARRRARRRRRSSEADEATATLDLGAPMTLRARDLDRFERTSSGATTSNE
CHAKSRRIAPSTSGRSPSEMNTLDLERNAATFANAFGVDAAAVVSPGNAGVDPYRAIVRC
AEKFCIDRDGAEHSIEDVERAGEEEDEAADDSRAVALTSASLMEGVRAFFVNFTKKRAEA
LGNALIRMGGSVCERADDSVTHVVACEESSALTKALESIDREDVVKITPEWITESYKQRR
PLPVSATNFEPRTRVAVIADRPHSQEAATSSGDSKALAVRVRKERENALAIRRSSGFGTI
WTSDLADNEKLEKSRSKFSCQPGEHNEKAMPIECNTKVADLLKGMADIYEDALRDQYRAK
QYAAAASALRSLNFEITSINDCDVVPMLKKKDGKIRKYVGEILNTGKLKALEELRARPDV
KACLELCGIHGVGPVTARSLFAKGYATVADLRARAPENLLTPAQKIGLKYYEEFKERIPR
EEVGFIATAVREAANTFQKDEVHCYCVGSFRRGKETSGDIDVLVECRDYSLANELLMHIL
SDLRPGGTSPRSGILTDDLLVGDHTYMGVAALLKPLKDDDDKPPIHRRVDIKVYDSESLP
TALLYFTGSDKFNRSMRLWAKKKGFNLQDKGLFADRSQAQASRVRAKGEEDVFDALGLDY
VPPEKRNV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttacacgccgatgaggacactctggcgaggcgtcgcgcgcgacgacggcgt
agatccagtgaagcggacgaggcgacggcgacgcttgatttgggcgcgccgatgacgctt
cgcgcgcgcgacttggacaggttcgagcgcacatcctcgggtgcgacgacatcgaacgag
tgtcacgcgaaatcacgacggatagctccttcgacgagcggtcgatcgccgagtgagatg
aacacgttagacttggagagaaacgcggcgacgtttgcgaacgctttcggcgtcgacgcc
gccgcggtggtttctcctggaaacgccggtgttgatccttaccgcgccatcgtgagatgc
gctgaaaagttttgcatcgatcgcgacggcgctgagcactcgatcgaggatgtcgagcgc
gcgggcgaggaagaggacgaggccgccgacgactcgcgcgccgtggcgctcacatcggcg
tctttgatggaaggagtccgggcttttttcgtcaacttcactaaaaagcgcgctgaagcg
ttgggaaacgcactcattcgcatgggcggatccgtctgtgaacgcgcggacgattcggtg
acgcacgtcgtggcgtgtgaggaaagctctgctttgacaaaagcgttagaatctatcgac
cgcgaagacgtcgtgaaaatcacgccggagtggatcaccgagagctataagcaacgtcga
ccactacccgtctcggcgacgaatttcgaaccgcgcacgcgcgtcgccgtgatcgccgac
cggccgcattcgcaagaggcggcaacatcgagtggagacagcaaggctctcgcggttcgc
gtgcgaaaagaacgggaaaacgcgttagccatacggcgctcgagtgggttcggaactatc
tggacgagcgatttggctgacaacgaaaagctggagaagagtcggtcgaaattctcgtgt
caaccgggagaacacaatgaaaaagcaatgccgatagaatgcaacacgaaagttgccgac
ctactcaagggaatggcggacatctacgaagatgcgctgcgcgatcaatatcgagcaaag
cagtacgctgctgcagcgagcgcgttgagatcgcttaacttcgagataacctccatcaat
gattgcgacgtcgttccaatgctcaagaagaaggatgggaagattagaaaatatgtcgga
gagattttaaacacgggcaaattgaaggcgctggaagaattgcgcgcgagaccggatgtt
aaggcatgtctagagctctgtgggattcacggtgttggcccagttaccgcgcgaagcctt
ttcgccaagggctatgcaactgtcgcagatttgcgcgcgcgcgctccagaaaatttgttg
accccggcgcaaaagattggtttgaagtattacgaagagttcaaggagcgaatcccacgg
gaagaggttggattcatcgccaccgccgtccgtgaagccgcaaatacgttccagaaggac
gaagttcactgttactgcgtgggatctttccgaagaggaaaggagacatccggtgacatt
gacgttttggtcgagtgcagagattactctcttgcgaacgaactcttgatgcacatcctg
agtgatttaaggccgggaggcacgagtccacgaagtggtatcctcaccgacgatctgctt
gtcggtgatcacacctacatgggcgtcgccgctctgctcaaacctctcaaggatgatgac
gataaaccgccgatacataggagagtcgacatcaaggtgtacgattccgagtctcttccc
acagcgctgctgtatttcactggaagcgataagttcaatcgatcgatgcggctctgggcg
aagaaaaagggattcaacttgcaggacaaggggctctttgcggaccgctcgcaggcgcag
gcatcacgcgtacgagcaaagggcgaagaggatgttttcgacgctctcggtctagattac
gttccgccggagaagcgaaacgtgtaa
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