Ostreococcus tauri: OT_ostta10g00010
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Entry
OT_ostta10g00010 CDS
T01358
Name
(RefSeq) Suppressor of forked
KO
K14792
rRNA biogenesis protein RRP5
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta10g00010
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
Other 90S particles
OT_ostta10g00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
OB_RRP5
Spt6_S1
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_C
TPR_15
TPR_19
CvfB_2nd
ARM_TT21_N
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
9832028
NCBI-ProteinID:
XP_022839726
OrcAE:
OT_ostta10g00010
UniProt:
A0A090M4X4
LinkDB
All DBs
Position
10:complement(223..5929)
Genome browser
AA seq
1870 aa
AA seq
DB search
MATPSEAREDKNVEGEFEVVRSGWRAKYVETLKYKSLRSGVKLLGVVSEVTARGLVMSLP
DGLRGTVARAEASDVFRGATRSAGAESADDESESSDDEFEGEEETISLESLYEPGQVLRC
VVLSLDKGKTGGKRIELSLRLENVCAGIGKDSLVEGSVAPAMVKSIEDHGYILDFGIAGT
SGFLPKKSVANDLTIRRGKILDVVITATPTGNKGYFTVTSDQKRVTSSVSHETSATNVST
LLPGMLVNSRVKQVLADGILCSFMTFFSGTVDCFQTGSVATTKGVASAFKVGQRMRARVI
FVDAVAKRVCLTLLPHLLEHTSITLPKLGKVFQTATIARVDAGQGVALSVSDGDDHIAAY
AHVSQLSDERVEKVEKKFKIGRSVNVRVIGHRLMDGIVSVSLKSSVMAQPFFSLEELTPG
MLVNGEVVAVEHYGAIVKLAEGIKALCPPLHVSDIVGRTTSSKVSPGAKLKFRVLNVDKN
SRRATVSHKRTLIKSELPVIASLEDALPGAVTHGVVTGVNEYGVFISLYGDLRGLANVND
LGLLSDQKPSDAFGVGQVVRVTIVSADASGRLRLSLAAGVALEAKTPGLMINASAADLTP
GIIVETAVVTHVSAQTGNVEVVFTAEKGNVPGIIALAHLSDHPLTATGLSSVLNPGDKIG
PLVVLEGKPTRAVLSRKLSLVESSQNSKLPASAEEATPGSVFPGYVASATSAGVFVRFLG
KLTGLAPPSQLVDGVSADIHDMFPVGKTVNALVLAVDTSTSPPRLSLSLKLSATSSPLSD
APLIRSFFNDIELLDERVANADDVGISPETAKSLQPGTWMDVTVNETKEYGVLMDMAIDS
NAVGLVTPHQLPESVEFESGDAVKCYVLDVSRREGVVDMGMRSGLERFKRNKTASGKSLK
RLKVGDEVTADVELVKAEYAVFSLPDHSGLIGYASVHHLNRSYEDATQRFTPAQRVKAIV
AQLPDGANGRLLLTVPVTISSSGGKIAAGTLVKGVVSEIQPLQALVALPNNARGRLYISE
FDLTEEKPLASVSVGSTIEATVLGLAGERGGLLDLSVHRKSAFSLDGVSVGDSLNAYVLS
ITQDGLKVTVAPGVTSFIPKIETSDKASELSESLETRFVIGQRVRATAVDIKLNKRRIDL
TLRTESVFGSNKVCVGAKLHGIVTRVVKHAGVMVQIGSHSFGRIHLTDLSDELKEEPSAS
YAAGAVVQVRVLNVSPSGEIDLSTRASRMSSKTILPEDAEVQDVANLVPGQRIKGYVKAT
TKKGCFVALSRSIDAMCKLSNLADDFIADPIASFPPGKLVQGRIVSADAAKGRVEISLRE
RENSSQGNADVSGVDVGSVMMGTVRRVQPYGVFIGLDGTKLSGLCHISMFADARINDDLS
LHVRQGERVRVKVLEINAETKKISLGCKASLFEDDDKNDEDEDHEMEDAQNPTLDPLMDV
DGESDDDDDDDDDDDDNEDDSDEELDGDSEEEHDDEENGNSEEDEGLIAKSDEEIDEEID
EESDEDVEDDTSESDDAAGDMSASDANDSDGEASDSEDEPIGKDLSFDWGATENEIRPVN
VDSDNPDDAKPLSKREKKRLKEAKELEILQKEQALRDGDAVPESAMEFEKLLIASPRSSF
LWVRYMAFHVSCGAYAEAREVAERAIVAIPASEETERMNIWAAYLNLENKYGTPTPEEAV
KKLFTRAVQLSNAKHLHMTLISMYERNGQQQSLEDALKKAAKKFSYSTKVWLAYIRAAVL
KGNSEWARQLLDRATQALPKHKHIKILMRTALFEMKEGNPERGRTMFEGILRNYPRRTDI
WSVYIDQEIKQGDVLRIRALFERATHLDLNAKSMKFLFKRYLDFERSEGDDERIAHVKQR
AMEYVSNKFG
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgagcgaagcgagagaggacaaaaacgtcgagggcgagttcgaggtcgtc
cggagcgggtggcgggcaaagtacgtcgagacgctcaagtacaaatcgttgcgatcgggc
gtaaagctcttgggcgtcgtctcggaggtgaccgcgagaggtctggtgatgagtctaccc
gacggtcttcgagggacggtcgcgcgcgcggaggcttccgacgtcttccgcggagcgacg
aggagtgctggagctgaatcggctgacgacgaatcggaatcatcggatgacgagttcgaa
ggggaagaggagacgatcagtttggaatcgctgtatgaacccggtcaggtgcttcgctgc
gtggtgctaagcctggacaaggggaaaacgggcggtaagcgcatcgagttatcattacgt
ttggaaaacgtttgcgcaggcattggcaaggatagtctcgtcgagggatccgtcgcaccg
gcgatggtgaagagcattgaagatcatggatacattttggattttggcatagcgggaacg
agcgggtttttgccgaagaagagtgttgctaacgacctgacgattcgacgagggaaaatt
ttggacgtcgtaatcaccgcgactcccactggaaataagggatacttcacggtgacgagc
gatcagaagagagtcacaagttcagtttctcacgaaacgtctgcgacaaatgtgtcgacg
cttctcccaggcatgctcgtgaactcacgcgtgaagcaagtccttgcggacggaatattg
tgcagtttcatgactttcttttcaggcactgtggattgctttcaaacgggctcggttgcc
acgacaaagggcgtagcgtcagccttcaaggttggtcaacgtatgcgcgcacgtgtgatt
ttcgtagatgctgttgcaaagcgcgtttgcttgacgctcttgccacacttacttgagcat
acgtcgatcacacttccaaagctcggtaaagtctttcaaacggcgactatcgcaagagtt
gacgccggccagggcgttgcactgagcgtgtctgacggcgatgatcacatcgcggcttat
gcgcacgtttctcaactctctgatgaacgtgtggaaaaggttgagaagaagtttaaaatt
ggacgctcggtcaatgtccgggtcatcggtcatcggctaatggatggtatcgtgagtgtg
agtctaaagtcgtctgtgatggctcaaccattcttttcactcgaagagctcactcccggt
atgttggtcaacggtgaagttgtcgcagtcgagcattacggagctatagtaaagctcgct
gaaggaattaaagcgctgtgtcctccgcttcacgtctctgacattgtcggtagaacgacg
tcgtcgaaggtcagtccgggggctaaacttaaatttagagtgctgaacgtcgacaaaaat
agccgacgggcgacagtgtcgcacaaacggacgctcattaagtcggagttgcctgtgatt
gcgtcgctcgaggacgccctcccgggtgctgtgacgcatggcgtcgtcaccggtgtcaac
gagtacggtgtatttatctctctgtatggcgatttgagaggtttggcgaatgtgaatgat
ttaggtttacttagtgaccagaaaccaagcgacgcgtttggagtcggacaggttgttcgc
gtcactattgtgtcagccgatgcttctggcagactacgattatctcttgcggctggtgtg
gcgttggaggccaagacccccggcttgatgataaacgcatctgcggctgatttaacccct
ggtattatcgttgaaacggcggtggtcactcacgtctccgcgcaaactgggaacgtagag
gttgtttttaccgctgaaaaaggcaacgtaccagggattatagctctcgcgcacctgtca
gatcatcctttgacagcaacaggcttgagttccgttctgaatcctggcgacaagatcggt
cctcttgttgtgcttgaaggcaagcctacgcgggcggtattgtctcgcaagctttctctt
gttgaaagtagtcagaattcgaaacttcctgcttccgccgaggaggcgacgcccgggtcg
gtgtttcctgggtacgtagcatctgctacttcggcgggtgtttttgtgcgctttttgggc
aaacttacagggctagcaccgccatcgcagctcgtggatggcgtctccgcggacattcat
gacatgttcccggttgggaagacagtgaacgctttagtgcttgccgtcgacacatctacg
tcgcctccgagattgtcgctttcgcttaagttgtcagcgacgtcgtctcctctgagcgat
gcgccattgatacgatcgttcttcaacgacatagagcttttggacgaacgagtcgctaat
gctgatgacgtcggcatctcaccagagacagccaaatctctccaacctggtacctggatg
gacgtcactgtgaatgaaaccaaggaatacggtgtgctcatggatatggcaatcgattcc
aacgcagtcggtctcgttactcctcatcagctaccagaaagtgttgaatttgaatcaggc
gatgcggtaaaatgttacgtgttggatgtgagccggcgagagggcgttgttgacatgggc
atgcgttctggtttagaacgcttcaagcgtaacaaaacagcatctggcaagagccttaaa
agactcaaagttggtgacgaagtgaccgcagatgtcgagctcgtcaaggctgagtatgct
gttttctctttaccggatcatagtggacttatcggatacgcatcagttcaccatctcaat
cgatcttacgaggatgctacgcaacgctttactccagctcaacgggtgaaagcaatcgtc
gcacagttacccgacggtgcaaacggtcgccttctccttacggtacccgttactattagt
tcgtcgggcggtaagatagctgccgggacgctcgtcaaaggcgtcgtatcggaaattcag
ccacttcaagccttggtcgcgttaccaaacaacgctcgaggtagattgtacattagcgag
ttcgatctcactgaggagaaaccgctcgcttccgtatccgtcggtagcacgatcgaagct
actgtattaggtctcgctggtgagcgtggaggattgctggatttatcagtccaccgaaag
agtgcgttcagtctcgatggcgtatccgttggcgactcgttgaacgcctacgtactttcg
atcactcaggatggactcaaagttaccgttgcgccgggagtgacgtctttcattccaaag
attgaaacgtccgacaaggcatccgagctcagtgaaagtctagagacgagattcgtcatc
ggtcagcgagtacgcgccactgctgttgacatcaagttgaacaagaggcgaatcgatctt
acgcttcgaacggaaagtgttttcggatcgaacaaagtgtgtgtgggcgcgaaattgcat
ggtatcgtcactcgcgtggttaaacatgctggtgtcatggttcagattgggtcgcactcg
tttggtagaatacatctcacagatttatcagatgaactcaaggaagagccgagtgcaagc
tacgctgctggcgcagtcgtccaagtgcgtgtgttgaatgtatcgccgagcggcgagatt
gatttatcgactcgtgcttcgcgaatgtcgagtaaaacgatcttgcccgaagatgccgaa
gtacaagacgtggcgaatctcgtaccaggtcaacgcatcaagggctatgtcaaggctacg
acaaagaaaggctgttttgtcgctctttctcgcagcatcgatgccatgtgcaagctttca
aatctggcggatgacttcatagccgacccgatcgcatctttcccgcctgggaagctcgtg
caaggtcgaatcgtgagcgccgacgcggcgaaagggcgagttgaaatctctcttcgtgaa
cgggaaaacagctctcaggggaacgcggatgtttcaggcgttgacgtgggatctgtgatg
atggggacggtacgtcgcgtgcagccttatggtgtcttcatcggtctagatggaacgaaa
ctatctgggctctgtcacatctcaatgtttgccgacgcacgtatcaacgatgacttgtct
ttgcacgttcgccagggcgagcgagtgcgagtaaaagtgctggagatcaatgcggagaca
aaaaaaatatcactcggttgtaaggcttcattatttgaagacgacgacaaaaatgacgaa
gacgaagaccatgaaatggaagacgcacaaaatccgacgctggatccattgatggacgtg
gatggagagagcgatgacgacgatgacgacgatgacgacgatgatgataatgaagatgac
agcgacgaggagcttgatggcgacagtgaagaagaacacgacgatgaagagaatggtaat
agtgaagaggacgaggggttgattgcaaaaagcgacgaggaaatcgacgaggaaatcgac
gaggaaagcgacgaggatgtcgaagacgataccagtgagtctgacgacgcggctggcgac
atgtccgcctcggatgcaaatgactctgatggcgaagcctccgattctgaagacgaaccg
atcgggaaggacttatctttcgattggggcgctacggaaaacgaaatacggccggtgaat
gtcgattccgataatccagacgatgcgaagccgctttccaagcgtgaaaagaaacgcttg
aaggaagctaaagaactcgagatcttgcagaaggaacaagcactcagagacggggatgcc
gttcctgaatccgctatggaatttgaaaagctcctcatcgcttcaccgaggtcttcgttt
ctgtgggtgagatatatggcgttccacgtcagctgcggagcatacgctgaagccagagaa
gttgccgagcgcgcaatcgtagcgataccggcctcagaggagaccgaacgcatgaatatt
tgggcggcgtatctcaatcttgagaacaagtatggaactccgacaccagaagaagcggtg
aaaaagcttttcactcgcgcggtccagctttccaatgcaaagcacttgcatatgacgctc
atatcaatgtacgaacgaaacgggcaacaacagtcgctcgaagacgctctcaagaaggcg
gcaaagaagttttcgtatagcactaaagtctggctagcgtacataagagccgcagtcttg
aagggtaactccgagtgggcgcggcagttgctcgatagggcgacgcaagcgctgccgaaa
cacaagcacatcaaaatcttgatgcgaactgctctcttcgaaatgaaagagggcaacccc
gaaagagggagaacgatgtttgaggggatattgcgaaactacccgcgtcgcaccgatatt
tggtcggtatacattgatcaggaaatcaaacagggcgatgttctgcgcatccgtgccttg
tttgagagagcgacgcaccttgatctcaacgcgaagagcatgaagtttttgttcaagcgc
tacttagatttcgaacgctcggagggcgatgacgagcgcatagcacacgtaaaacagcgt
gcgatggagtacgtatcgaacaagtttggctaa
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