Ostreococcus tauri: OT_ostta10g00320
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Entry
OT_ostta10g00320 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ota03041
]
OT_ostta10g00320
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta10g00320
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta10g00320
Spliceosome [BR:
ota03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
OT_ostta10g00320
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
Helicases
OT_ostta10g00320
Pre-60S particles
OT_ostta10g00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
9832369
NCBI-ProteinID:
XP_022839737
OrcAE:
OT_ostta10g00320
UniProt:
A0A090N453
LinkDB
All DBs
Position
10:<66698..>68383
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AA seq
561 aa
AA seq
DB search
MGGGGGDETTKKRAKKGRRTSEGDGEGGKRAKKTKAVEGAGEDGTDAGVEGLESVGRTDG
ILSDATFASLELSAPTMRGIESMGFTTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFL
VPSAELLYHAKFMPRNGTGVMVLSPTRELALQIYNVAQQLMEKHSQTHGLIIGGANRRAE
AERLIKGVNLLVATPGRLLDHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKML
PKERQTMLFSATQTTKVEDLARLSLKSPIYIGVDDSRAVSTASGVEQGYCVVPSEQRFLL
LFTFLKKNLKKKIMVFFSSCNSVKYHAELLNYIDIPVSDIHGKQKQQRRTTTFFEFCKAE
RGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGTDGKGRALLFLIPEEL
AFLKYLKAAKVPLNEYEFPTKKIANVQSQLEKLVEKNYYLHTSARDAYRAYILAYNSHTL
KDVYNVHSLNLVAVASSFGFHKPPKVQLNLDSKASKGRTKSRGEGGPGSDYRRQKGTGHK
FSAENPYGRKSEGDSRQFVRM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggcggcggcgacgagacgacgaagaagagagcgaagaaggggcgacgaacg
agcgaaggagacggcgagggagggaagcgggcgaagaagacgaaggcggtggagggtgcg
ggtgaagacgggacggacgcgggcgtggaggggctggagagcgtggggcggacggatggg
attctgtccgacgcgacgttcgcgtcgctcgagctgagtgcgccgacgatgcgagggatt
gagtccatggggttcacgacgatgacggaggtgcaagcgcggtgcgtgccgccgctgttg
gcggggaaggacgtcttgggggcggcgagaacggggagcgggaagacgctggcgtttctg
gtaccgagcgcggaattgttgtatcacgccaagtttatgccgagaaacgggaccggggtc
atggtgctctcacccacgcgcgagttggctttacaaatttataacgtggcgcagcagctc
atggagaagcactcgcagacgcacggcttgatcatcggaggggctaacagacgagcggag
gcggagcggctgataaagggcgtgaacctgctcgtcgccaccccgggtcggctgttggat
cacatgcagaacactcgtggtttcacgtttagttcgctcaaggttttcgtcatggatgag
gcggatcgaatgctcgacatcggtttcgaggaggagatgcgaaccattgtgaagatgctg
cccaaggagcgacagaccatgctcttcagcgcgacgcagacgaccaaggtcgaagatctc
gcccggctgtcgctcaagagcccgatttacatcggtgttgatgattccagagcagtgtct
accgcgagtggcgtcgaacaagggtattgcgtcgttccgagtgagcaaagatttttgttg
ttgtttacctttttgaagaaaaacttgaagaagaaaatcatggtcttcttctcatcttgc
aactcggtcaagtaccacgccgagctgttgaattacatcgacattcccgtgagtgatatt
catgggaagcagaagcaacagagacgcacgacgacgttttttgagttctgcaaagcggag
cgaggcattttattgtgcaccgacgtcgccgcgagaggtttggatattccggcggtagat
tggatcatccagtacgatccaccggacgatccgaaggagtatattcatagagtcggtcgt
accgcacgcggaacggacggtaagggtcgagctctgctcttcctcatccccgaggagttg
gcgtttctcaaatatctcaaggcggccaaggtgcccctaaacgagtacgagttcccgacc
aagaagatcgcaaacgtgcagagccagctggaaaaactggtagaaaagaactactacctt
cacacgagcgcgcgagacgcgtaccgggcgtacatcttggcgtacaactcgcacacgctc
aaggatgtgtacaacgtgcactcgctcaacctcgtcgccgtggcgagctccttcggtttc
cacaagcctccaaaggtgcagttgaatctcgattccaaggcgagcaaggggcgaacgaaa
tctcgaggcgagggcggacccgggagcgattatcgtcgtcaaaaaggaacgggtcacaaa
tttagcgcggagaacccttacggtcgcaagtctgagggtgactcgcgccaattcgtgcgc
atgtaa
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