Ostreococcus tauri: OT_ostta10g00510
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Entry
OT_ostta10g00510 CDS
T01358
Name
(RefSeq) THO complex, subunit 5
KO
K13174
THO complex subunit 5
Organism
ota
Ostreococcus tauri
Pathway
ota03013
Nucleocytoplasmic transport
ota03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OT_ostta10g00510
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta10g00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta10g00510
03041 Spliceosome [BR:
ota03041
]
OT_ostta10g00510
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
OT_ostta10g00510
Spliceosome [BR:
ota03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
OT_ostta10g00510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Aida_N
Motif
Other DBs
NCBI-GeneID:
9832351
NCBI-ProteinID:
XP_003081485
OrcAE:
OT_ostta10g00510
UniProt:
Q010M5
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Position
10:complement(<92448..>93890)
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AA seq
480 aa
AA seq
DB search
MPPRRRVPPSRSSDPVDVPSDTVARRTAASPAPLPSDVTPERTEAQIELLGELTHDLRAD
VELALDSTAEERKNISSRCQETLAKIRRAQCAALSGLEHLRDKTGERNVEVNRARTRAGT
IAYETATLERELRDFEREDGASGSVKGVDLMDRGEYEADARARGLDTEAADEYDEMKKRL
AHELIVRKELVERQKALTLELAEVKAAIEERKKTLSGDPGAIKAMKRHAEELRRKFDLPY
TTTETLDKQVAVLPGPLYILYAQLKHAQQMGEDIRVQILGREADAEAYEEAMENPTATDD
GNVRDERDGHKRQRGGRGGRGRGGRGMKLSSSTYAEHPLRIELDGVGGRKVIFNYLTKLH
MVIARANPGKDDALKDLFPGDDGSATPNHAIEIVESDFTFDESCTGYGGKPYKWAQDLAG
MSFLPSVPRSRAMIEKENLDGKAVTSKARVMDVLRAIRERFDQKKSEDAAPGSKKRERKD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcgtcgacgcgtccccccttcccggtcgtcggacccggtcgacgttccgtcg
gacaccgtcgcgcgccgcaccgcggcctcacccgcgccgttaccgagcgatgtcacgccc
gagcgcaccgaggcacagattgaacttttgggagaactcacgcacgatttacgcgccgac
gtcgaactcgcgctcgattccaccgcggaagaacgaaagaacatctcgtcgaggtgtcaa
gagaccctggcgaagatccgacgggcgcagtgcgcggcgttgagcgggttggaacatctg
cgggacaagacgggcgaacgaaacgtcgaggtgaaccgcgcgcggacgcgcgcgggaacg
atagcgtacgagacggcgacgttggagcgggagttgcgtgattttgaacgagaggatgga
gcgagtggaagcgtgaagggggtggatttgatggatcggggggagtacgaggcggacgcg
cgcgcgcgcgggttggacacagaggcggcggatgagtacgatgagatgaagaagaggttg
gcgcacgaattgatcgtcagaaaggagttagtggagcggcaaaaggcgctgacattagag
ttggccgaagtaaaggcggcgatcgaggagcggaagaagacgctgagcggggacccgggc
gcgatcaaggcgatgaagagacacgcggaggagttgcgaaggaagtttgacttgccgtac
acgacgacggagacgctggataagcaagtggccgttcttcctgggccactttacatcttg
tacgcgcagttaaagcacgcgcaacagatgggagaggatattcgcgtgcaaattcttggt
cgagaggctgacgccgaggcgtacgaggaggctatggaaaatcccaccgcgacggacgac
ggtaatgtcagggacgagcgcgacggtcacaagcgtcagcgcggaggtcgaggtggacga
ggcaggggaggtagggggatgaagttgtcgtcgtccacgtacgccgagcatccgcttcgc
atcgagcttgacggtgtcggtgggcgaaaggtaatcttcaactacctcaccaagttgcac
atggtcatcgcgcgtgcgaatcccggaaaagatgatgcgctcaaagatttgttcccgggc
gatgacggctcggcgacaccgaaccacgcgattgagatcgtcgagtcggactttacgttt
gacgaatcgtgcacaggttacggcgggaaaccgtacaagtgggcgcaagacttggccgga
atgagctttctcccgtccgtgccacgttcgcgcgccatgattgagaaagaaaatctcgat
ggaaaagcggtcacgtccaaggcgcgcgtcatggacgtcttgcgggcgattcgagagagg
tttgatcagaagaagagtgaagacgcggcgccgggttcgaagaagagggaacgaaaggac
tag
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