Ostreococcus tauri: OT_ostta10g01860
Help
Entry
OT_ostta10g01860 CDS
T01358
Name
(RefSeq) Nucleotide-binding, alpha-beta plait
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
ota
Ostreococcus tauri
Pathway
ota03020
RNA polymerase
ota03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OT_ostta10g01860
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta10g01860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta10g01860
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta10g01860
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta10g01860
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
OT_ostta10g01860
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OT_ostta10g01860
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
OT_ostta10g01860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHM7_cyt
RRM_1
Motif
Other DBs
NCBI-GeneID:
34946191
NCBI-ProteinID:
XP_022839799
OrcAE:
OT_ostta10g01860
UniProt:
A0A090N474
LinkDB
All DBs
Position
10:complement(<302502..>305972)
Genome browser
AA seq
1156 aa
AA seq
DB search
MADDADGTDAPVPLAGGLVRALSRVATVIRGNENARANEEANASAAPAEALERAPTKRER
NMDTTATKLDENAVRVDALSKTKSKRMQKILAKRVEEEAVASDEEEEDPAFTEHREAETV
PEYTWTATMRRRLENNECDVAFDEDSEMAKAAEKSEGASTDNDEEEGANVPYRGGEPTQL
TRMKSRINSMNAPTNSAGAPIRNPNADLSEKQDVVEDSYFLAVMSDKLPAYKRPRRHIAR
LENLESAVLDKDHKQLPVWSTTKSDMDVLGPGIGLWFAQLKRLGIVFFVLSCLASVFIAH
YVHLAKTNTVDIDPEIKTTLGMTAVSTYASVYGVDIRTIMAFLSCLDVFIVLCFMAVGSG
LARSIRAFVIRVDEALLTLSDYSLQVDGLPNNATEEEVREHFEEFGPVADVVIVRAFGRL
LRMRMARARLFKKAEILKAELSAMRHNLRKKGESLEENRSFNRKWKEFYKIRDAIMDLKE
KIDKTAQMPFDAFDVVTAFVTFEQETDKLACRDEYFAYFNCFRTERTMFRVEKTISENGQ
ESMTYHYLKVKQAGEASDILWENMTNVSWKNYLIRRSTAALGIITLLVGAIVLVVLTTTW
SKAGAQLVVSCNGLYTLNGNKNLYCPAIWDLDKDLSSADLRVISNENFRSQIDSSDCHKY
VESAVWSYDMTQYSPYSAAIYSSSLTTEQARTAGYMDDKWNGGLDSTTTADECAAKVCYD
CMCQSAALSGSVSDVCRDYYYDQVVIILFEVGRLTITALTSITLLWASAKFALFARFKTV
SATERATSRYAFYTLLTNVLILPLLVNIDIEGLENFPILFRGSHQDVTLDWYALVMRSIM
ISAFINACYFGPWRLVGAWVQQFSRYTTSKWCKTQQKLNGLYARPKFTLAERYGQMMTVI
FSTVVLFAAAPILIPVAALYCLLSYWSDKTLILRYCRFPALYSHTLAQQFLFYFPYACLA
HFAFAAWVFSQWDVPSYFLESLDGWDESLQSQNEADFWSIRANMTRYAQLDFEERFYRVN
GLIQLIPLLIYVAYHLIKSFLSGLGRTMLYVLGCARCLESDWSADVMFHNFTTVRDNMYK
NDESVDGILSGLPSYRVHDNPEYVNLFPEARRFEQEQSFSKTAQEMPGEEHEEDSYVEKE
SSAVRNMWSTFAGKKE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgccgacgggacggatgcgcccgtcccgctcgcgggtgggctcgtgcga
gcgctctcgcgcgtggccacggtgatccgagggaacgagaacgcgcgcgcgaacgaggag
gcgaacgcgagcgcggcgccggcggaggcgctggagcgcgcgccgacaaagcgcgagcgg
aacatggacacgacggcgaccaagttggacgagaacgcggttcgcgtcgatgcgttgtcc
aagacaaaaagtaaacggatgcagaagatactcgcgaagcgagtggaagaggaggcggtg
gcgagcgatgaggaggaggaggacccggcattcacggagcatcgcgaagccgaaaccgta
ccggagtacacttggacggcgacgatgcgcagacgcctcgagaacaacgagtgtgacgtg
gcgtttgacgaagattctgagatggcaaaggcggcggagaagagtgaaggtgcgtctacc
gacaacgacgaagaagaaggcgcaaacgttccttacagaggcggcgagccgacgcagctg
acgagaatgaagagcaggatcaactccatgaacgcaccgacgaattcggccggtgcgccc
atcaggaacccaaatgcggacttgagcgagaagcaagacgtggtggaagattcgtacttt
ctagccgtcatgagcgataaactccctgcgtataaacggccaagacgacacatcgcccgg
ttggagaatcttgaatctgcggttctcgacaaagatcacaagcaactgccggtttggagc
accactaaaagcgacatggatgttctaggaccggggattggtctgtggtttgctcagctg
aaaagactaggcatcgtcttcttcgttctgtcgtgcctggcctcagtcttcatagcgcac
tacgtgcaccttgcgaaaacaaacacggtcgacatcgatcccgagataaagacaacgctc
ggtatgaccgcagtgagtacgtatgcgagcgtttacggcgttgacattcgaacaattatg
gcttttctttcttgtctggatgttttcatcgtcctgtgcttcatggcggtgggctcgggt
ctcgctcgcagtattcgcgcgttcgtcatccgagtcgacgaagcgctgctcactctctcc
gactactcgttgcaggtcgatgggctaccgaacaacgctactgaagaagaggtccgtgag
catttcgaagaatttggtcctgtggcggatgtggtcatcgtgcgtgcgttcggtagactg
ctacgaatgcgcatggcgcgggctcgtctctttaaaaaagctgaaattttgaaagcagag
ctaagcgcaatgaggcacaatctccgcaagaagggagagtcactcgaagaaaatcgtagc
ttcaaccgtaaatggaaggagttttataaaattcgtgacgccatcatggatttgaaagaa
aagattgacaaaacagctcaaatgccgtttgatgcgttcgatgtcgtcactgccttcgtt
acttttgagcaagaaaccgacaagcttgcatgccgggatgaatatttcgcctacttcaac
tgctttagaactgagcgcacaatgtttcgcgttgaaaagacgatctcagaaaacggccag
gaaagcatgacgtatcactacctcaaagtgaaacaagccggcgaagcgtccgatatcctg
tgggaaaatatgacaaatgtttcgtggaagaattacttgattcggcgctcgaccgcggcg
cttggcatcatcactctcctcgtcggcgccattgttcttgtcgtactgacgacgacctgg
tcaaaggctggggcacaacttgtcgttagctgcaacggactctacacattaaatgggaac
aaaaacttgtactgtccggccatctgggacctcgacaaggacctttcgtcagccgatctc
agagtcatctcaaacgagaacttcagatcacagatcgactcctccgattgccacaagtac
gtcgagtccgcagtttggtcttatgatatgactcaatattctccatactccgcggcaata
tactcatcttcactgactactgaacaagctcgaaccgctggatatatggacgacaagtgg
aacggtggtctggattcgacgacgaccgcggacgaatgtgcggcgaaggtctgctacgat
tgcatgtgccaatccgctgcgctttcggggtcagtgtcggacgtctgtcgagactactac
tacgatcaagtcgtcataatacttttcgaagttggtcgtctcacaattacggctctcact
tcgatcactttactgtgggcgtcagctaaatttgcgctctttgctcgcttcaagactgtt
tctgccacggaacgagcgacgagtaggtacgccttctacaccctactgacgaacgttttg
atcctgccgttgctcgtgaacattgacattgaaggcttggaaaacttccccatccttttc
agaggtagtcatcaggacgtcaccctcgattggtatgctcttgtcatgaggtccataatg
atttccgctttcatcaacgcctgctacttcggtccttggcgactcgtcggggcttgggtt
cagcaattttctcgatacactacgtctaagtggtgcaagacgcagcaaaaattgaatgga
ttgtacgcgagaccaaagttcacgctagctgagcgatacgggcagatgatgactgtcata
ttttccaccgtcgtgctctttgccgctgctccgattctcatccccgtggcggcgctatat
tgcttactctcctactggtccgacaagacgctgattctgagatactgccgcttcccggca
ctgtactcccacactttggcgcagcagttcctgttttacttcccttacgcatgtctggcg
cactttgcgtttgcggcgtgggtattttcgcagtgggacgtcccgtcttactttctcgaa
tctctcgatgggtgggacgagagcctccaatctcagaacgaagccgacttctggtcgatt
cgagcgaacatgacgagatacgcgcaattggatttcgaagaacgcttctaccgcgtcaac
ggactgatccagctgattcctctcttgatatatgttgcttatcacttgatcaagtcgttt
ctgagtggtttgggaagaaccatgctgtacgtgctcggttgcgctcgatgcctcgagtct
gactggagtgcggatgtgatgttccacaacttcaccaccgttcgcgataacatgtacaag
aacgacgagtccgtggacggaatcctctccggcttgccttcgtatcgcgtgcacgataat
ccagaatacgttaatcttttccccgaggcgcggagattcgagcaagagcaatcgttctca
aagactgctcaagaaatgccaggagaggaacacgaggaggactcctacgtggagaaagag
tccagcgcggtcaggaacatgtggagtacgttcgcgggaaaaaaggaataa
DBGET
integrated database retrieval system
