Ostreococcus tauri: OT_ostta10g01910
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Entry
OT_ostta10g01910 CDS
T01358
Name
(RefSeq) UBA-like
KO
K10839
UV excision repair protein RAD23
Organism
ota
Ostreococcus tauri
Pathway
ota03420
Nucleotide excision repair
ota04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
OT_ostta10g01910
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta10g01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ota03051
]
OT_ostta10g01910
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta10g01910
Proteasome [BR:
ota03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
OT_ostta10g01910
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
OT_ostta10g01910
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Ubiquitin_5
UBA_9
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
9832165
NCBI-ProteinID:
XP_022839803
OrcAE:
OT_ostta10g01910
UniProt:
A0A090M9K3
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Position
10:complement(313242..314659)
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AA seq
396 aa
AA seq
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MRVSFKTLTNAKFDLELDSETTVGEAKARVRENQGYGDESVVLVHKGKVLSDDGTLGGAG
VTEESFVVVMVQKAKAAPKPKPAPAAAQAAAPAAAPAAXXXXXXXAAAQAAAPAAAPAAA
PAATPTPTPTPTPAPAVSAPAMATEAPTTTAEAPASGAGMVMGPELEATVANIMTMGFER
EQVLKALRAAFNNPDRAVEYLLTGIPEQAEAPRPAAQAQPAAAAAPQAPQADVSAALGGG
ALNLFPEGIPDMSGDGAGDDGMLDFLRENPQFQAIRAMVQGNPQILQPMLAELQRQNPQL
YHLINANQEEFLALLNEPLPENIQDLMSDFGEGVPELEGQGEGMQIELTQEERETVDRLA
GLGFPVEICIEAFLACDKNEQLAANYLLNLASGGME
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgtcgttcaaaaccttgacgaacgcgaagtttgatctggagctcgattcggag
acgacggtgggcgaggcgaaggcgcgcgtgcgcgaaaatcaaggatacggcgatgagagc
gtggttttggtgcacaaggggaaggttttgagcgatgatggaaccttggggggggcgggg
gtgacggaggagtcgttcgtggtggtgatggtgcaaaaggcgaaggcggcgccgaaaccg
aaacccgcgccggcggcggcgcaagcggcggctccagcggcggctccagcggcnnnnnnn
nnnnnnnnnnnnncggcggcggcgcaagcggcggctccagcggcggctccagcggcggct
ccagcggcgacgccgacgccgacgccgacgccgacgcccgcgccagcggtgtcggcgccg
gcgatggcaacggaggcaccgacgacgaccgcggaggcgccggcgagcggtgcgggaatg
gtcatgggcccggagctcgaggcgaccgtcgcgaacatcatgacgatgggattcgagcgc
gagcaagtcttgaaggcgcttcgcgcggcgttcaacaaccctgatcgcgcggtcgagtac
ctcttaacgggaattccggagcaagccgaagcaccgcgaccggcggcgcaggcgcaaccg
gccgcggcggcggctccgcaggctccgcaggcagacgtgtcggcggcgctcggcggcggg
gccctcaacctgttcccggagggcatcccagacatgtcgggagatggggcgggagatgac
ggcatgttggactttttacgcgagaacccgcagttccaagccattcgcgccatggtacaa
gggaacccgcagattcttcagccgatgctcgccgagcttcaacgacagaacccgcagttg
tatcacctcatcaacgccaaccaagaagagttcttggcgttgttgaacgagcctctgcct
gaaaacatccaagatctcatgtcagatttcggagagggcgttcccgagctcgaaggtcaa
ggtgagggaatgcagatcgaactaactcaagaggaacgcgagacagttgaccgtctcgcc
ggattaggcttcccggtagaaatttgcatcgaggctttccttgcatgcgacaagaatgag
caattggccgcgaactatttgctcaatctcgccagcgggggaatggaatag
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