Ostreococcus tauri: OT_ostta10g02100
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Entry
OT_ostta10g02100 CDS
T01358
Name
(RefSeq) DNA mismatch repair protein, MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ota
Ostreococcus tauri
Pathway
ota03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OT_ostta10g02100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta10g02100
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OT_ostta10g02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
9832185
NCBI-ProteinID:
XP_022839810
OrcAE:
OT_ostta10g02100
UniProt:
A0A090M9L0
LinkDB
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Position
10:353975..356932
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AA seq
926 aa
AA seq
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MADADAETKFARVYARLIADDGRAGERVVRFFDRRDFYSVHGADAEYVARTFYKTTSVIK
HTGRGEDALAGVTLNRAMFETALRELLIEGAEGARVELYEESKPSGTWTLSKTASPGRTQ
AFEEELFRSNEMSDAAVVCAVRATSGGGVGVAYVNATTRELGACAFVDDEQFCTLESVLC
QMGAKECVVPKEGLETPEGRRLRDVVARCGALATERPSREFDVLDLESDLDRLIKGNVEA
HRAVIDQPNSAACLAAVLRFSEMLADSANHGRCSLSMYDTGRYMRLDASALRALNVLPER
SDGPSNFSLYGLLNKCRTPMGRRLLSRWLKQPLVDVGEIAQRHDVVHEFVNSAEVRDALR
SAHLRSLPDIERITRKLERRKATLMDLCRLYQASAALPHMAEALERCEGRFADFIRTKYA
DELKKFSDPSHLGRFEGLLEAAVDLSKIPDEYVICASYDAELGELQKQKDVLEEDIRSAF
ADASKDLGMERDKQLKLEHNNMHGWFMRLTKKDETSVRKKLSVSYQILEAKKDGTKFTNK
KLRALSEQRVALDRSYEAKQRHLVERVVDVAASFSEVFLNVSAMAAEIDVLVSFAEVAVS
APVPFVRPIMQEKSSDTIHLENCRHPNVEAQDNVRFIANTCSMKKGESWFQIITGPNMGG
KSTFIRQVGVCVLLAQIGSFVPCDEATIAVRDAIFARVGAGDCQLRGISTFMAEMLETAA
ILKAATPSSLVIIDELGRGTSTYDGFGLAWAISEHIVNEIQAPCMFATHFHELTALKGAS
GVANFHVEALIDQASRKLTMLYQIKPGACDQSFGIHCAEFARFPEEVLKVARQKAEELED
FSKEGAERAVADVSEPNAKRQRGEEVSDDMARGVIRARQFLSDFAAVPLERMSPAEAVAR
ARQLKAELESDAAHNSWLTDLVANAA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcggacgcggagacgaaattcgcgcgcgtctacgcgcgattgatcgcggac
gacggacgcgcgggcgagcgcgtcgtgcgattcttcgatcgacgagatttttattcggtg
cacggtgcggacgcggagtacgtcgcgcggacgttttataagacgacgtcggtgatcaag
cacacggggaggggagaagatgcgttggcgggcgtcacgctgaatcgcgccatgtttgag
acggcgttgcgggagctgttgatcgagggcgcggagggcgctcgagtggagctgtacgaa
gagagcaagccgagcgggacgtggacgctttctaagacagcgtcgccgggtcgaacgcag
gcgttcgaggaggagttgtttcgctcgaatgaaatgtcggatgccgcggtggtgtgcgcg
gttcgcgcgacgagcggcggcggcgtgggcgtggcgtacgtgaacgcgacgacgcgcgaa
ttgggcgcgtgcgcgttcgtggacgatgaacagttttgcacgctcgagagcgtgttgtgt
cagatgggcgcgaaggaatgcgtggtgccgaaggaaggtttggagacgcctgaggggaga
cggttgcgagacgtcgtcgcgagatgcggcgcgctagccacggagcgtccttcgcgagag
tttgacgtgttggatctcgagagcgatcttgataggctgatcaagggcaatgtcgaggcg
catcgagcggtgatcgatcaaccaaactctgcggcgtgtctcgccgcggttttgcgtttc
agcgagatgctcgccgatagcgccaatcatgggcgatgttcgctgagcatgtacgacacc
ggtcgttacatgcgtcttgacgcctcggcacttcgcgcgctgaacgtccttcccgaacgc
tccgatggacccagtaactttagtctttacggcttgctgaacaagtgccgaacccccatg
ggtcgacgtcttctctcgagatggctgaaacagccgctcgtcgacgtcggcgaaattgcc
caacgacacgacgtcgtgcacgaatttgtgaactccgctgaggtcagagatgctcttcgc
agtgctcaccttcgatctctaccggatattgagcgcatcactagaaagctcgaacggcgt
aaggcgacgttgatggacctgtgtcgactgtatcaagcgagcgcagcgctcccgcacatg
gcggaggcgctggaacgatgcgaaggtcgattcgcggatttcattcgcaccaagtacgcc
gatgagctgaagaagttcagcgatccgagccatctcgggcgtttcgaaggtcttttagag
gcggcggtggatctgagcaagattcctgacgagtatgttatctgcgcttcgtacgacgcc
gagcttggggagctgcaaaagcaaaaggacgtcctggaagaggacattcgaagcgcgttc
gccgacgctagcaaagatttggggatggaacgagacaaacagttgaagttggagcacaac
aacatgcacggctggtttatgagattgaccaagaaggatgagacctcagttcgcaagaag
ctaagcgtcagttatcaaattctcgaggcgaagaaggatgggaccaagtttacgaacaaa
aagcttcgcgcgctctccgagcaacgcgtcgctctcgatcgtagctatgaggccaagcag
cgtcacctcgtcgagcgcgtcgtcgacgtggcggcttcgttttctgaagtcttcctgaac
gtctctgccatggccgcggagatcgacgttctcgtctccttcgctgaagtcgcagtgagc
gcccccgtaccattcgttcgtccaatcatgcaggaaaagtcatctgacacgatccatttg
gagaattgtcgacacccgaacgtcgaagcgcaggacaacgtgcgattcatcgcgaacacg
tgctcgatgaagaagggcgagtcttggtttcaaatcatcacgggtccgaacatgggtggg
aagagtacgtttattcgccaggtgggcgtgtgcgtgctcctggcacagatcgggagtttc
gtaccgtgtgatgaagcaacgatcgccgttcgggatgccatttttgctcgcgtcggagcc
ggtgattgtcaactccgcggcatctccacgttcatggctgagatgctcgagacggcggct
attttgaaggcagcaacgccttcgagtttggtcatcatcgatgagctcggtcgcgggacg
agcacatacgacggctttggtctcgcttgggcgatcagcgagcacatagtgaacgagatt
caggctccatgcatgttcgccacgcacttccacgagctcaccgcgctgaaaggtgcgagc
ggcgtcgccaactttcacgtcgaggcgctcatcgaccaggcgagccggaaacttaccatg
ttgtaccaaatcaagcccggtgcgtgcgatcaatcgtttgggattcactgcgccgagttt
gctcggttccccgaggaagttctcaaggttgccagacaaaaggcggaggaactggaagat
ttcagcaaggaaggcgccgagcgagccgtcgcggatgtttccgaacccaacgccaagcgt
caacgcggcgaggaagtctccgacgacatggctcgcggcgtcatccgcgcacgccagttt
ctctctgacttcgccgcggtgccactcgagcgcatgtccccagccgaggccgtcgcccgt
gcgagacagctcaaagctgaactcgagagcgacgccgcgcacaactcctggctcaccgat
ctcgtcgccaacgccgcgtga
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