Ostreococcus tauri: OT_ostta10g02710
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Entry
OT_ostta10g02710 CDS
T01358
Name
(RefSeq) unnamed product
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ota
Ostreococcus tauri
Pathway
ota03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OT_ostta10g02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta10g02710
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OT_ostta10g02710
mRNA degradation factors
5'-3' decay
Decapping complex
OT_ostta10g02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
9832044
NCBI-ProteinID:
XP_022839838
OrcAE:
OT_ostta10g02710
UniProt:
A0A090N487
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Position
10:complement(445751..447733)
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AA seq
598 aa
AA seq
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MSGGFFDAPSDPSLEGELGGELEDDLAAMTTRTETEEVYIASTREEEAMMRAAALNYGAP
LLRPSDLLNPNALGRAPVNAKTREEIEREAYARATAPRGPDGGVGMMGGMPPPPGMMGPP
PPGMMGPPPPGMTGPPPPGMMGPPPPGMTGPPPNQRRSNQTYRGEALPEWADGPTMNAVP
MDVPGMPGVRAPPPGNWPAGQENRPRDVGRRPREQRPRGRPHYNGLYMANDEIEGILRIQ
WSATHPNDRTAYEHDYFYQSWLRRNNPSKLKEPFCPEALRELASHVKEARGPVTFVPGLD
GLGKVPFGNIRSPKPLLDMSKSSAPKGDGEQSGEGEQRRLEQEPLLAARIMIEDSMCLLL
DVDDIDRQLEEGRPSESEEDLKKRRTFLLDGLISTLLLPSVPVLVAGGAEHDGVFQRIVT
LPKGRILLADALPRFPLGSAAAATLVWAILRNVGMLIGGKNAINNPSAEALLRAAADSVQ
LMNAVAVEGTVGAVAMGLDLAEAKQQLAPLTSGSSTTGALVGALAMSLERAHLLEISPST
HKAFGAAFGMVFSVFDKHAVNAIQRRDGSLPRDLLRALMHHCTDAQKQRLKGHISALS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggattcttcgacgcgccgagcgatccctcgctcgagggggagctggggggg
gagctcgaggacgatctcgcggcgatgacgacgcggacggagacggaggaggtgtacatc
gcgtcgacgcgggaggaggaggcgatgatgcgggcggcggctttgaattacggtgcgccg
ttgttgcgaccgagtgatttgttgaatccgaacgcgttgggacgggcgccggtgaacgcg
aagacgcgggaggagatcgagcgggaggcgtacgcgcgggcgacggcgccgcggggaccg
gatgggggggtggggatgatgggtgggatgccgccgccgcctgggatgatgggaccgccg
ccgccggggatgatgggaccgccgccgccggggatgacgggaccgccgccgccggggatg
atgggaccgccgccgccggggatgacgggaccgccgccgaatcaacgacgatcgaatcag
acctatcgcggcgaagcgcttccggagtgggccgatggaccgacgatgaacgcggtgccg
atggacgtgccgggtatgccgggcgtgcgcgcgccgccgccgggtaactggcccgcgggt
caagaaaaccgtccgcgcgatgtcggacgacgaccccgcgaacaaaggccgaggggacga
ccgcattacaacggcttgtacatggcgaacgacgagatagagggcattctgcgcatccaa
tggagcgccacgcacccgaacgatcgcacggcgtacgaacacgattatttctaccaatcg
tggctccgtcgaaacaacccgtcgaagctcaaggagccgttctgtcccgaggcccttcgc
gagctcgcatcacacgtgaaggaagcgcgtggacccgtgacgtttgttcccggcttggat
ggtctcggcaaggtgccgttcggaaatattcgctcgcccaagccgcttttggacatgtcc
aagagcagcgcgccaaagggcgacggtgaacagtccggcgagggcgagcagcgcagattg
gagcaagaaccgcttctcgcggcgcgcatcatgatcgaggattccatgtgtctacttctc
gacgtcgatgacatcgatcgccaactcgaagagggccgaccgagcgagagcgaggaggac
ttgaagaagcgtcgcacgttcttgttggacggcctcatcagcacacttcttttaccctcg
gttccggtgctcgtcgcggggggcgcagagcacgacggcgtgttccaacgcatcgtcacg
cttccaaagggcagaattctcttggccgacgcactgccgaggttcccgctcggttccgcc
gccgcggcgacgctcgtgtgggcgatcctgcgtaacgttggtatgctcatcggtggtaag
aacgcgatcaacaaccccagcgcggaggctctccttcgagccgcggcagattctgtccaa
ctgatgaacgcagtcgccgtagagggtaccgtcggcgccgtcgcgatgggtctggacctc
gccgaggcaaagcaacagctcgcaccgctcacgagtggtagttctaccaccggtgctctc
gtcggtgcgctcgcgatgtcgctcgaacgcgctcatttgcttgagatttcgccgtcgacg
cacaaggcattcggtgcagcgttcggcatggtgttctccgtgttcgacaagcacgccgtg
aacgccattcagcgacgcgacggttcgctcccgcgcgacttgcttcgtgctctcatgcat
cactgcactgacgctcaaaaacagcgcctgaagggccacatcagcgctctcagctga
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