Ostreococcus tauri: OT_ostta10g03290
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Entry
OT_ostta10g03290 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ota03041
]
OT_ostta10g03290
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta10g03290
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta10g03290
Spliceosome [BR:
ota03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
OT_ostta10g03290
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
Helicases
OT_ostta10g03290
Pre-60S particles
OT_ostta10g03290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
SNF2-rel_dom
F420_ligase
Motif
Other DBs
NCBI-GeneID:
9832106
NCBI-ProteinID:
XP_003081772
OrcAE:
OT_ostta10g03290
UniProt:
A0A090M9T0
LinkDB
All DBs
Position
10:complement(<539345..>541336)
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AA seq
663 aa
AA seq
DB search
MRVASRPSLSTKHRGSRAHASRPSAVRRRERRAVVEPAATRLYAFSPDDDRVDDDGRRDA
YGYDDADERERRRREKTRAAERRGGFKILERAPSRAEATRDGRGSENEEYGRRFEDDGGR
GRRDGYERRGGGRGRGRFGRGGRGGRGGRDGRDAARGGERRERGFARGRDDDRYRDDGPS
YSREDEYEGDEPDDEVDWILQGLEDELEDGRRWGERQNKAYLPELLSKYVEDDFEPMVYT
REPDDLDEYSFFSGARFAQLGASDEVRAALKESFKIERPSHIQAQSYRALSGDAADASQR
HILLADQAGSGKTLAYLLPLLQRLQGIEAEQGRSKSKRPRLLVLTPTSELATQVRDVVKN
LSFGGLRSRSLLANNVSKPRTQIEALKEGVDIVIGTPGRVARLIEEGKMLTDDVEAVVMD
ECDVLLGDSFEFAEQVAPIRNALRQDAQFVLVTATIPDDVLRQLKKFFESDIRVVQGPGL
HRPSAGMLERLIDCSGGEIFDEESGFYRKFKALLQLLEVDRAQRTLLFCNKIETCRKIEN
FLKRADQDGDKYKILPYHAALSREQQQQNLKEFITSSSKTPHVLVCTDRASRGLDASRVE
HVILFDFPRDPSEYVRRVGRTARGAMGEGRVSVLVIGRQVRLAREIMRRNDRGDPVEATP
TNL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgcgtcgcgtccatcactgtcgaccaagcaccgggggtcacgcgcgcacgcg
tcgcgtccgagcgcggtgcgacgccgagaaagacgcgcggtggtcgagccagccgccact
cgactgtacgcattctctcccgacgacgaccgcgtcgacgacgacggacgacgcgacgcg
tacggctacgacgacgccgatgaacgcgagcgtcgacgacgggagaagacgcgggcggcg
gagcgtcgaggtgggtttaagattttggaacgcgcgccgtcgcgggcggaggcgacgcga
gacgggcgcgggagcgaaaacgaggagtacgggcgtcgatttgaagacgacggcggacga
ggacggcgggatggatacgagagacggggtggaggacgcggacgtgggcgattcggacgg
ggggggcgcggtggacgaggcgggcgagacgggcgagacgccgcgcgcggcggagagcgg
cgcgagcgcggattcgcgcgagggcgagacgacgatcggtatcgcgacgatggaccgtcg
tactcgcgtgaagatgagtacgagggggacgaacccgatgacgaggtggattggatctta
caaggtctcgaggacgaactcgaggacgggcgtcggtggggggagaggcagaacaaggcg
tacctcccggagctcctgagcaagtacgtggaggatgatttcgagccgatggtgtacacg
agagagccagacgatttagatgagtactccttcttctctggcgcgcgattcgcgcagctt
ggggcgagtgatgaagtgcgcgcggcgctcaaggagagcttcaagattgagcgaccgtcg
cacatccaggcgcaatcgtaccgcgcgctcagtggagacgccgcggacgcgtcgcagcgt
cacatcttgctcgccgatcaagcgggaagcgggaagaccctggcgtacctgttaccgctg
cttcagcgactgcaaggcatcgaggctgagcaggggaggagcaagtcaaagcggccgaga
cttctcgtgctcacgcctacgagcgagctcgcgacgcaggtgcgagacgtcgtaaaaaat
ttgtcgttcgggggattgcgttctcgttctctgttggcgaacaacgtgagtaagcctcgt
acgcagattgaggcgctcaaggagggcgtggacatcgtcatcggaactcccggtcgcgtc
gcgagactcatcgaggagggtaagatgctcaccgacgacgtcgaggcggtcgtcatggac
gagtgcgacgtgttactcggcgacagctttgagtttgcggagcaagtggcgccgattcga
aatgcactgagacaggacgcgcaattcgttctcgtcacggcgacgattcccgacgacgtt
ttgcgccagctcaagaaattttttgagagcgatattcgcgtcgtgcagggacccggtttg
catcgaccgtccgcaggtatgctcgagcgcctcatcgactgtagcggtggagagatcttc
gacgaagagtccggattctatcgcaagtttaaggcgttactgcaactactcgaggtggac
agggcgcagcgaacgttgctcttctgcaacaagatcgagacgtgccggaagattgaaaac
tttctcaagcgtgccgatcaagatggcgataagtataaaattttgccctaccacgccgcg
ctttcgcgcgagcagcagcaacaaaatctcaaagagttcatcacgtcttcgtcgaagacg
ccgcacgtgctcgtgtgcactgaccgcgcgtctcgaggcctggacgcgtctcgcgtcgag
cacgtcatcttgtttgatttcccgcgagatccgagcgagtacgtgcgcagagtcgggcgc
accgcgcgcggggccatgggcgagggccgcgtctccgtcctcgtcatcggacgacaggtt
cgcctcgcgcgagaaatcatgcgtagaaacgatcgaggcgatccagtcgaggcgacgccc
acaaacctctag
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