Ostreococcus tauri: OT_ostta10g03400
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Entry
OT_ostta10g03400 CDS
T01358
Name
(RefSeq) Nucleotide-binding, alpha-beta plait
KO
K13098
RNA-binding protein FUS
Organism
ota
Ostreococcus tauri
Pathway
ota03015
mRNA surveillance pathway
ota03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OT_ostta10g03400
09122 Translation
03015 mRNA surveillance pathway
OT_ostta10g03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ota03041
]
OT_ostta10g03400
Spliceosome [BR:
ota03041
]
Complex A
Other components
Complex A specific factors
OT_ostta10g03400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF3399
Motif
Other DBs
NCBI-GeneID:
9832113
NCBI-ProteinID:
XP_022839865
OrcAE:
OT_ostta10g03400
UniProt:
A0A090M5M3
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Position
10:556865..557751
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AA seq
274 aa
AA seq
DB search
MSAHPRYRDDDRDRARARGGDDDRDRARDDRRPRFGATDDGDRGRAGDGRDRPPRVERFD
PEADWRCGQDLIEREREAQHGWLLDGLEDTTNRIFIKGFDAVSTSEDDLRELFSGIGIIS
RVKQRTGFPDQWPYAVKIYRDERGEKKDEAVITYDDPHAAQSAPEFYNGYEHNGKKLHVS
MAQSKPKAPPPSQGDNDRGHGGRGGDDRDRGGYGDRGGRGGGYGDRGGYGDRDRGGYGDR
DRGGYGDRDRGGYGDRGRERGRFGDRDRGGHRPY
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcatccgcggtaccgagacgacgaccgcgatcgcgcgcgcgcgcgcggtggc
gacgacgatcgcgatcgcgcgcgcgacgaccgacgaccgcgattcggtgccacggatgac
ggcgaccgcgggcgcgcgggcgacggacgcgatcgcccgccgcgggtcgaacggttcgac
ccggaggcggattggcgatgtggacaagatttgatcgagcgcgaacgcgaggcgcagcac
ggatggctcctggacgggctggaggacacgacgaatcgcatcttcatcaaagggttcgac
gcggtgagcacgagcgaggatgatttgagagagctcttctcggggatcggaatcatctcg
agggtgaaacagcgcacggggtttcccgaccagtggccgtacgccgtgaagatttaccgc
gacgagcgaggggagaagaaagacgaagcggtgatcacgtacgatgacccgcacgcggcg
cagtcagcgccggaattttacaatgggtacgagcacaacggcaaaaagttgcacgtttca
atggctcagagcaaaccgaaagcgccgccgccttcacaaggtgataacgatcgtggccac
ggtggacggggcggtgacgacagagacagaggaggatacggagaccgaggcggtcgcgga
ggcgggtacggcgatcgcggagggtacggcgatcgggaccgcggagggtacggcgatcgg
gaccgcggagggtacggcgatcgggaccgcggagggtacggcgaccgagggagagagcgc
ggtaggttcggagaccgagatcgcggaggacatcgtccgtactaa
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