Ostreococcus tauri: OT_ostta11g00280
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Entry
OT_ostta11g00280 CDS
T01358
Name
(RefSeq) Zinc finger, RanBP2-type
KO
K13095
splicing factor 1
Organism
ota
Ostreococcus tauri
Pathway
ota03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OT_ostta11g00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ota03041
]
OT_ostta11g00280
Spliceosome [BR:
ota03041
]
Complex A
Other components
Complex A specific factors
OT_ostta11g00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
Zn_ribbon_RanBP
KH_1
KH_12
PHD_4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
9835833
NCBI-ProteinID:
XP_003081831
OrcAE:
OT_ostta11g00280
UniProt:
Q00ZC5
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Position
11:<63172..>64932
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AA seq
586 aa
AA seq
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MSDDGGAREGRPRKRKSRWDADDGAAGETREIAATGDGSRFGTGPSMVEQDAGDGPVALP
DAAAIHAHLASRGVVSASAMTTLRTDDPEVTRKFAKYQDVSQRLAMRDFTDDRPESDRSP
SPPPKYNRFGVKVNTREARMKDKLLRERDELIEFLMERARGEFQPPPDWRPRKKERKLYV
PEDEYPGYNFIGLILGPRGNTQKRMERETNTRIMLRGKGSVKPGAHRDHKTDYKEDEPLH
VVVLGERWEDVDRAAEMVGHILRPIDEEENVHKRMQLRELASINGTFVETFGACKFCGVQ
GHVQANCPEREKMESYRAPVELVTCKICGNGGHPTRDCPLAGKADAVAATNEMNQEYSAF
LNEIGVSKDDLRQSGDASNAGPSVGGASMPLRSNVPGGRGQYNNLRPGDWVCEPCGYPNY
ASRQMCKRCSEPRPGGPPPLSGGYQNRVPFQQQITHAPITHAPIGAGGTMMRQAPPPPPP
MMMPMGAPQTYISVPPPPPEDGTAGVPPPPPEDGTAGVPPPPVMQVAPPPVVQVPPPPVV
QVPPPPVMNVPPPPTDEPEEGELGDVPPPPPPDSKEKEFESFMNNL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacggcggcgcgcgcgagggacgacctcgaaagagaaaatcgagatgggac
gccgatgacggcgccgcgggcgagacgcgggagatcgcggcgacgggtgatggatcaagg
ttcggcacggggccgtcgatggtcgaacaggatgcgggagacgggccggtggcgctgccg
gacgcggcggcgattcacgcgcacttggcgtcgagaggggtggtgtcggcgagcgcgatg
acgacgctgcgaacggatgatccggaggtgacgcggaagtttgcgaagtatcaagacgtg
agccagcgtttggcgatgcgggatttcacggatgatcgaccggagagcgatcggagtccg
tcgccgccgccaaagtataaccggttcggcgtcaaggtgaacacgcgagaggctcggatg
aaggataagcttttgcgagagcgggacgagttgattgagtttttgatggagcgcgcgcga
ggggagttccagcccccgccggattggcgaccgagaaagaaggagaggaagctttacgtg
ccggaggacgagtacccggggtacaacttcatcggcttgattctgggtcctcgtgggaac
acgcagaagcgcatggaacgcgaaacgaatacgcgaatcatgcttcgaggcaagggcagc
gtcaaaccgggcgcgcacagggatcacaagacggattacaaggaggacgagcctttgcac
gtggtcgtcttgggtgagcggtgggaggacgtcgacagggcggcggagatggtcggacac
attttgcggccgatcgacgaggaagagaacgtgcacaagcgcatgcagcttcgtgagttg
gcgtccatcaacggtactttcgttgaaacgttcggcgcgtgtaaattctgcggcgtccag
ggacacgtgcaggcgaactgccctgagcgcgagaagatggagagctatcgcgcaccggtg
gagctcgtgacgtgtaagatttgcggtaacggaggccacccgacgcgagattgtccactc
gccggcaaggctgacgcggtcgcggcgacgaacgagatgaaccaggagtactcggcgttt
ttgaatgaaatcggagtcagtaaggacgatctgagacagtcgggcgatgcctcgaatgcg
ggcccgagcgtcggtggcgcgagtatgccgctgcgttcgaacgttcccggtggtcgcggt
cagtacaataatctacgcccgggagattgggtctgcgagccgtgcggttatcccaattac
gcttccaggcaaatgtgcaagagatgcagcgagcctcgacccggtgggccaccgcctttg
agcggaggatatcaaaatcgagtaccttttcagcaacagatcacgcacgcgccgatcacg
cacgcgccgatcggtgccggcgggaccatgatgcgacaggcgcctccgccgcctccgccg
atgatgatgcccatgggcgctcctcagacctacatctcggtgcctccgccgcctccggaa
gatggtacggccggcgtgccacctccgccgccggaagacggcacggcgggcgttccgccc
ccacctgtgatgcaagtcgctccgccacctgtggtgcaagtccctccgccaccggtggtg
caagtccctccgccaccggtgatgaacgtcccccctccgccaaccgatgaaccggaggag
ggcgagctcggggacgtgcccccgccgccaccgcccgactccaaggaaaaggagttcgag
tcgttcatgaacaatctctag
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