KEGG   Ostreococcus tauri: OT_ostta11g00380
Entry
OT_ostta11g00380  CDS       T01358                                 
Name
(RefSeq) RNA polymerases, subunit N, zinc binding site
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
ota  Ostreococcus tauri
Pathway
ota03020  RNA polymerase
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OT_ostta11g00380
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta11g00380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta11g00380
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta11g00380
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     OT_ostta11g00380
  RNA polymerase III system
   RNA polymerase III
     OT_ostta11g00380
  RNA polymerase I system
   RNA polymerase I
     OT_ostta11g00380
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      OT_ostta11g00380
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 34946225
NCBI-ProteinID: XP_022839890
OrcAE: OT_ostta11g00380
LinkDB
Position
11:complement(78757..78972)
AA seq 71 aa
MIIPVRCFTCGKVIGNKWDTYLDLLQADYSERDALDALGLERYCCRRMVMCHVDLIEKLL
RYNTLERVDGT
NT seq 216 nt   +upstreamnt  +downstreamnt
atgatcattcccgtgcggtgcttcacgtgcgggaaggtgatcgggaacaaatgggacacc
tacctggatctcttgcaagcggactacagcgagcgcgacgccctggacgcgctgggtttg
gagcggtactgctgtagacggatggtgatgtgtcacgtcgatctcatcgagaagttgttg
cggtataacacgctcgaacgcgtggacgggacgtga

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