KEGG   Ostreococcus tauri: OT_ostta11g01730
Entry
OT_ostta11g01730  CDS       T01358                                 
Name
(RefSeq) Dcp1-like decapping
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ota  Ostreococcus tauri
Pathway
ota03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OT_ostta11g01730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ota03019]
    OT_ostta11g01730
Messenger RNA biogenesis [BR:ota03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     OT_ostta11g01730
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     OT_ostta11g01730
SSDB
Motif
Pfam: DCP1
Other DBs
NCBI-GeneID: 9833610
NCBI-ProteinID: XP_003081990
OrcAE: OT_ostta11g01730
UniProt: Q00YW6
LinkDB
Position
11:complement(327412..328197)
AA seq 261 aa
MPPRTVKPREAETRASAPVDAHAEMNLTVLRASDASIESIVAQSKHCVLYGFDVNSRSWV
RKSVEGALFVVRRSSAPRDAFVVLNRAGSENFTREIGGEAFELERSPPYLMYRVGREVHG
IWFHDESECETMCEAFERVMSGSSVGSVSAGGSIDERATSDSLSALFASASVSGGENPKR
DVKASVVNGSNGTTVPRVLQPPRKVMGTSTEAPRATRSKSASVATTAMAVVKPAAVRAAL
LELIEDDTFIDRITKAIARHS
NT seq 786 nt   +upstreamnt  +downstreamnt
atgccgccgcgaacggtgaagccgagggaggcggagacgcgagcgagcgcaccggtggac
gcgcacgcggagatgaatttgacggtgctgcgagcgtcggacgcgtcgatcgaatccatc
gtcgcgcagtccaagcactgcgtgctgtatggattcgacgtgaactcccgatcgtgggtg
cgaaagagcgtggagggtgcgctgttcgtcgtgcgacgatcgagcgcgccgcgcgatgcg
ttcgtggtgctgaacagagccgggagcgagaactttacgcgggagatcggcggcgaggcg
tttgagctcgagcggtcgcctccgtacctcatgtatcgagttggaagagaggtgcacggg
atatggtttcacgacgaaagtgagtgcgaaacgatgtgtgaagcgttcgagcgggtgatg
tctgggtcgagcgttggttcggtgagcgcgggcggttcgatcgacgaacgggcgacgagc
gattctctgagcgcgttgttcgcgtctgcgagcgtgagcggaggcgagaatccaaagaga
gacgtgaaggcaagcgtcgtgaatggatcgaacggtactacggtcccgcgcgtgttacag
ccaccgcgtaaggttatggggacgtccacggaggcgccacgcgcgacgcgatcgaaatcg
gcgtcagtggcgacaaccgccatggcggtcgtcaaacccgccgccgtgcgcgcagcctta
ctagaactcattgaggacgacacattcatcgatcgcatcaccaaggcgatcgcgagacac
tcgtag

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