KEGG   Ostreococcus tauri: OT_ostta11g01840
Entry
OT_ostta11g01840  CDS       T01358                                 
Name
(RefSeq) DNA polymerase epsilon, catalytic subunit A,C-terminal
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ota  Ostreococcus tauri
Pathway
ota03030  DNA replication
ota03410  Base excision repair
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OT_ostta11g01840
   03410 Base excision repair
    OT_ostta11g01840
   03420 Nucleotide excision repair
    OT_ostta11g01840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ota03032]
    OT_ostta11g01840
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta11g01840
Enzymes [BR:ota01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OT_ostta11g01840
DNA replication proteins [BR:ota03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    OT_ostta11g01840
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      OT_ostta11g01840
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 9833623
NCBI-ProteinID: XP_003082003
OrcAE: OT_ostta11g01840
UniProt: Q00YV3
LinkDB
Position
11:complement(346703..353722)
AA seq 2339 aa
MSRSKTPAFSGGGATHKANLYGESRLGVRGGRGTRGGRGGRGGRGYVGGDGRAKAQIAAE
EDALHAELGFGTHSGGDDRIGWLINVSSTQVEDKESGKAFAAVNLYFMEQDGSTFKAQVK
YKPYFYVATKTGCEHEVEALLRRRYGEQIADVVMEDKEDLDLKNHLSGLKQTYLKVEFLT
VQELMDVRREILPIVSKNKKKTSAASAYEALSRQESIDAGNKPRKLQLTDYEEAMVDIRE
YDVPYHMRYLIDENVRCGMWYNVHVEQGNARVTLQDAKSGNDMLEVKGEPRVCAFDIETT
KLPLKFPDAEHDQVFMISYMLDGQGYLITNREIVSEDVEDFEYTPKEEYQGPFIVWNEAN
EQALLRRWFDHMREAQPSIYVTYNGDYFDFPFIETRAKKNGMDMYREIGFKCEQSGECRS
TSALHLDCFCWVKRDSYLPAGSHGLKAVTKAKLKFDPVEVDPEDMLPFAQSRPQHMAQYS
VSDAVSTYYLYKKFVHDFIFALSTIIPLSPDEVLRKGSGTLCESLLMVQAYEGEIVCPNK
QVGAGEQYYNGHLLNSETYIGGHVECLQAGVYRSDIPCDFNLTPDGYQKLLDTLDDDLKY
ALEVEGKMKQSDVSNYDEIRAAIVEKLEFLRDNPRIKSKPLIYHLDVAAMYPNIILTNRL
QPAAMVTEDVCAACDYNRPGKKCLRELEWVWRGEHFASTSSEYAQIKAQLQVDTFPAADP
GGSSRTWYELSYEEQQEQKKNRLKMYTQKVYRKVMEKPVTATKTAGICQRENAFYIDTVR
AFRDRRYVYKGKNKEAGKQLEAAKQAGSIADIQQAANNVVLYDSLQLAHKCILNSFYGYV
MRKGARWYSMEMAGVVTNTGAKIIQMAKQLVDDIGMPLELDTDGIWCCLPCEFPEDYTFT
MKGEGKKPYQISYPCVVLNRMTAVRNTNDQYLTFDEKTGTYKQSSEMSIEFEVDGPYKAM
ILPASKEEGVLIKKRYAVFDEAGKLVELKGFELKRRGELKLIKVFQSEVFDYFLKGETLD
GVYQAVGAIANRWFDMLKTRGAKFDDEELMEYISESSVMSKPAIDYGDRKSTSLTTARRL
AQFLGADLVKDKGLVCKYIISKKPLGAPTSQRAIPVSIFNAEVSVARSFLKEWTKDNDLS
GEDDEMPDMRDLVDWEYYKTRLAGAIQKIISIPAALQGVENPCPDVKLPDWLNKRIREKN
DKFAQQDLKKMFRAQFAAGAPLAKKDLNMLDIEDSFTGTPSRARARSLLTNGDAPRTPEQ
VVTPNGKAPRTPGSASATEAPDRETDYDGWLKFYKAKWKTLRANIKRLRVEDEKERAAAE
REGGVVRRRRRSGAIGLESFVESREETIAHSIMHIIQVEETRTPGVFAVWVYVNGGMQSI
KIDIPRRLVIATREADPEGEFGKADKHRIVASLPRGFTSPHLYEVNVPERTLSAGVDISA
LLADPNVIGVYEKHVDLADRFIYNVGCVMAVKKTEQKRALEISDNTYSMDMFQMKATGEI
SSYLPKLCHIGFYFAGIAGDKGRGIYVLHNSRDGRGTVIVHQPGGRAVREINPEVWSESL
RSALGQEQSAEERTDFTMADAQNWTVLYARNMEQVGKHLNHAMGLYMSTTSGGTILLVQA
PANAGVDPSQDASSIRQGLAGRLGALMPASGRLPIVFRPPNLSDCDLNQDAAQGWQLDVA
KTATMRITGNSEWLQRYIEVASYAHIPIGNLKSDWWVHTADTFFARSLQDDDQVLWSGPS
GEPDLGGGASAVSLSGLDDTYGATRMEVSAPGAYRSVCVELQVHHLAVCAISKSGILNDL
EQGALLGFETGTKGTTRVGGHESAGAFKTLRKLVENWLRDATDRHNHYADELLSQLHRWL
FSPFSVLRDPALKNLVELCMKKVFTLLLAELRKLQVDVVYADMRRIIIATGKHDLASASS
CVEGVTHALRQRELFSWLQLDSVKQWHSLLFRGPFDYAGITAASLPGESQWQDSIAPNDA
SLDPLAFHNSEGALDMHWNIARFLPESIQDHFHAIVGEFLLLPWKFEQNGGDEPYRGRTP
VKFRAMEDSESDDDLNCDLNSASDDELPMAQRHPGTPSIAHNSRDLENLENEKVSWLVRQ
IDSHFSPKLLRYAQEIQKVLGIPGPRSPAEHQFPTPPGSHLSKEIRGTPALAFVKTVIAV
LSLDASVADSVSLLRRNALKMIRVGEFAPEAEFIEPCVSYTLRDVICSACCDCRDLDLCR
DPDLAAGHWACSYRDEHGLLCAQPYDRQWVEGALVAEVNDRVRKYQLQDLKCVRDGRVKV
GHLGNRCACGGLFTCSAKDGSLGDDLRVFSSIAEAHDFNILRETVSWVRSNAFTCVPTS
NT seq 7020 nt   +upstreamnt  +downstreamnt
atgtcgaggtcgaagacgcccgcgttcagcggtggtggggcgacgcacaaggcgaatctg
tacggggagtctcggttgggggtgcgaggtggtcgagggacgcgtgggggacgaggcggg
cgcggaggacgggggtacgtcggcggcgacggacgggcaaaggcgcagatcgcggcggag
gaagacgcgttgcacgcggagctcgggttcgggacgcactcgggtggagatgatcgaatc
ggatggttgatcaacgtgagtagcacgcaggtggaggataaggagagtgggaaggcgttt
gcggcggtgaatctgtacttcatggagcaggacgggtcgacgttcaaggcgcaggtgaag
tacaagccgtacttttacgtcgcgacgaagacggggtgcgagcacgaggtggaggcgttg
ttgcgacggcggtacggcgagcagatcgcggacgtggtgatggaggataaggaggatttg
gatttgaagaaccacctgagcgggttgaagcagacgtatttgaaagtcgagtttctcacc
gtgcaagaactcatggatgttcgtcgagaaatcttacccatcgtgtctaagaataaaaag
aaaacctccgcggcgtcggcgtacgaggcgttgtcgcgtcaggagagcatcgacgccggc
aataagcccagaaagctgcagctgacggattacgaggaggccatggtggacattcgcgag
tacgacgtgccgtatcacatgagatacttgatcgacgaaaacgtgcgttgcgggatgtgg
tataacgttcatgtcgagcagggtaacgcccgggtgacgttacaagatgccaagtcagga
aacgatatgcttgaggtgaagggggagccgcgcgtgtgcgccttcgacatcgaaacgacc
aagcttccactcaagtttcccgacgccgagcacgatcaggtgtttatgatatcgtacatg
ctcgacggccaggggtatttgatcaccaaccgtgagattgtgagcgaagatgtggaggat
ttcgagtacacaccgaaggaggagtaccaaggtccgttcatcgtctggaacgaggcaaac
gaacaggctctcctacgcaggtggttcgatcatatgcgcgaggcgcagccgagcatttac
gtgacgtacaacggtgactatttcgattttccgttcatcgagacgagagcgaagaagaac
ggcatggacatgtaccgcgaaatcggattcaagtgcgagcagtctggtgagtgtcgcagc
acgtcggcactgcacttggattgcttctgctgggtgaagcgtgactcgtatctcccggcc
ggttcgcacggtttgaaggcggtgaccaaagcaaaattgaagttcgacccggtcgaagtg
gatcccgaggacatgttgccgttcgcgcagagtcgtccgcaacacatggctcagtactca
gtctcagatgccgtgagcacctactacttgtacaagaagttcgtgcatgactttatcttt
gcgctgtcgaccatcattcctctatcgccggacgaggtgctccgaaagggatcagggacg
ctctgcgagtctctactcatggtgcaggcgtacgaaggtgagattgtctgcccgaacaag
caagtcggcgccggagagcaatattacaacgggcacctactgaacagcgagacgtacatc
ggtggacatgttgagtgtcttcaagcgggcgtgtaccgcagcgatattccttgcgatttc
aatttgactccagatgggtaccaaaagcttttggatactctcgatgatgatctcaagtat
gccctggaggtggaaggcaagatgaagcaatcagacgtctccaactacgacgagattcgg
gcggctatcgtagaaaagttggagttccttcgcgacaacccgcgaatcaagagtaaaccg
ctgatttatcacttggacgtcgcagcgatgtacccaaacatcattttgacgaaccggttg
caaccggcggcaatggtgaccgaggacgtgtgtgccgcatgcgattacaatcgtccgggc
aaaaaatgcttgcgagagttagagtgggtttggcgcggcgaacactttgcctcaacctcg
agcgaatacgcgcaaatcaaagcacagttgcaagtggacactttcccggcggctgaccct
ggcggctcatcgcgaacgtggtatgagctctcctacgaggaacagcaagagcagaagaag
aatcgtctcaaaatgtacacgcaaaaggtctacaggaaagtcatggagaaacctgtgacc
gccacgaagacggctggtatttgtcagcgggaaaacgcgttctacattgacactgtaaga
gctttccgcgaccgtcgctacgtgtacaaaggaaagaacaaagaggcgggtaaacagtta
gaggcggcgaagcaagccgggagcatcgctgacattcagcaagccgccaataatgttgtg
ttgtatgattccttgcagctcgcgcacaagtgtattttgaattcgttctacgggtacgtc
atgcgcaagggcgctcgatggtattcaatggaaatggctggtgttgtgacaaacactggt
gcgaaaatcattcaaatggcgaaacaactcgtcgacgatattggtatgcctctagaattg
gacacggatggtatttggtgctgcttaccgtgcgagttcccggaggattacacgttcaca
atgaaaggcgaaggcaagaagccgtaccagatttcctacccttgcgtcgtcctcaaccga
atgactgcggttcgtaacacgaacgaccagtacctgacgtttgatgagaagacgggaact
tacaagcagagctcggaaatgagcatcgagtttgaggttgacggaccgtacaaggcgatg
attcttccagcgtcgaaggaggaaggtgtgctaatcaagaaacgctacgcggtctttgat
gaagctgggaagttggtggagttgaagggtttcgaactgaagcgtcgcggtgaactcaag
ttgatcaaggtgttccaatctgaagtgtttgattacttcttaaagggcgaaacgttggat
ggagtgtaccaagctgtcggtgccattgccaaccgttggttcgatatgctcaaaacaaga
ggagcgaagttcgacgacgaagagctcatggagtacatttctgaatccagcgttatgagt
aagccagcgatcgattacggtgatcgaaagtctacctcactcaccacagcgcgacgcttg
gcacagttccttggcgctgatctggtcaaagacaaaggcctggtgtgtaagtacattatc
tccaagaaacctcttggggctccaacatcgcaacgcgcgattcctgtgagtatcttcaac
gcggaagtctctgtcgcaagatctttcttgaaggagtggacgaaagacaacgacctctca
ggtgaagatgacgagatgccggatatgcgcgatctcgtcgactgggaatactacaagact
cgtcttgctggggcgatccaaaagattatcagcatcccagcggcgctgcaaggtgtcgag
aatccatgtccggatgtcaaactccccgattggctgaataagcgcattagggagaagaac
gacaagttcgctcaacaagacttgaagaagatgttccgagctcaattcgcagctggagcg
ccacttgccaagaaggatctgaacatgttggacattgaagacagtttcacgggcacgccc
agtcgcgctcgcgctcgatcacttctcacgaacggagacgcaccgagaactcctgagcag
gtcgtgacgccgaacggtaaagctccacgaactcctggatccgcgagcgcgacggaggcg
ccggacagagagacggattatgatggttggctgaagttttacaaggcgaagtggaagact
ttgcgagcaaacatcaagcgcctgcgagtcgaggacgagaaagaacgcgctgcggcggaa
agagaaggtggggtggtgagaagaagacgtagatcgggagcgatcggtctcgaatcgttt
gtggaatcgcgcgaagagacgatcgcgcactccattatgcacatcattcaagtcgaggag
acgcgcactcccggcgtgttcgccgtttgggtgtacgtgaacggaggcatgcagtccatc
aagattgatattcctcgacgcctcgtgattgcaacccgagaggctgatcctgagggcgaa
ttcggcaaggcggacaaacatcgaattgtcgcttcgcttccacgcggattcacgtcacct
catctgtacgaagtgaacgtcccagagcgaacgctatcagccggagtagatatctctgcg
cttctcgctgatccgaacgtcatcggagtgtacgaaaaacacgttgatctggcggataga
ttcatctataacgttggatgtgtcatggctgtgaagaagacggagcaaaagcgcgctctt
gaaatcagtgacaacacgtactccatggacatgttccagatgaaagccacgggggaaatc
agttcgtatcttccgaaactctgccacataggattttacttcgctggtatcgcaggcgac
aagggtcgcggtatctacgtgttgcacaacagtcgcgacggtagaggaacggtgattgtt
caccagcccggtgggcgagccgttcgggaaatcaaccccgaagtttggtccgaatcactt
cgctccgctcttgggcaagagcaaagtgccgaagaacgaactgatttcaccatggctgat
gcgcaaaactggaccgtgttgtacgcgaggaacatggagcaagttggcaagcacttgaat
catgctatgggcctgtacatgtccaccacttctggtggcaccatacttctcgtacaagct
cccgcaaacgctggtgtagatccatcacaagatgcgtcgtcgatcagacaaggtttagcg
ggtaggctgggagcgctgatgcccgcttccggacggcttcctatcgtgttcaggccacca
aacttgtctgactgcgatttgaaccaggacgcggcgcaaggctggcagctcgacgtcgcg
aagacggccaccatgcgtatcaccggtaactctgagtggttacagaggtacattgaagtt
gcgagctacgcgcacattcccatcggcaacttgaaatcagattggtgggtgcacaccgcg
gacacatttttcgctcgttcacttcaggacgacgatcaagttttgtggagcggaccaagt
ggcgagcccgatctcgggggtggagcgagtgcagtgtcgctgagcggactcgatgatacg
tacggggctacgcgcatggaagtgagtgctcctggcgcgtatcgcagtgtttgcgttgag
ttgcaagtgcatcacctcgctgtgtgcgccatttccaagtctggcattttgaacgacctc
gagcaaggcgcattattgggctttgagactggcactaagggaacgacacgtgtaggagga
cacgaatccgctggagccttcaagacgcttcggaagctcgtagaaaactggctcagagac
gcgacggatcggcacaatcattacgccgatgagttgctgtcgcagcttcaccgctggctg
ttcagtccattttcggtgctaagagatccggctctgaagaacctggtagaactctgcatg
aagaaggtgttcacacttttattggctgagcttcgaaagctccaggtggacgttgtttac
gcggacatgcgaagaatcataatcgcaacgggcaaacacgatctcgcgagcgcctcttca
tgcgtcgaaggtgtgacacatgcgctgcgtcagcgagagctcttttcttggcttcaactc
gattccgtcaagcaatggcattcgcttcttttccgaggaccattcgattacgctgggatc
acggccgcgtcgttgccgggtgagagccagtggcaagactcgattgcaccgaacgatgcg
tcgcttgatccgttggcgtttcataacagtgagggtgcgctggacatgcactggaacatc
gcgcgattcttaccagagtcgattcaggaccacttccatgctatcgtgggcgagttcctg
ctgttgccgtggaagttcgaacaaaacggaggtgacgagccatatcgcggacgaactccc
gtcaaattcagggcaatggaggacagtgaatccgacgatgatttgaactgcgatctgaac
tctgcatctgatgatgagctgccgatggcacagaggcacccaggcacgcccagcatcgct
cacaatagtagagatctggagaacctggagaacgagaaggtgagctggttggtgagacag
attgattcacacttttcgccaaagctgctccgttacgcgcaggaaattcaaaaggttctc
ggcatcccgggtccgcgctcgccggctgagcaccagttcccgacgccaccaggctctcat
ctttcgaaagagattcgaggcacgcctgcactggcgttcgtcaagacggtgatcgcggtg
ctgtcgctcgatgctagcgttgctgattccgtgtcgcttctacgacgcaacgcattaaag
atgattcgcgtgggcgagttcgcccccgaggctgagttcatcgagccgtgcgtctcttac
acgctccgagacgtcatctgttccgcatgctgcgactgccgcgatctggatctgtgccgc
gatcccgatctcgccgctggtcactgggcgtgttcgtaccgtgacgaacatggattgcta
tgcgctcagccgtacgacaggcagtgggtcgagggcgccctcgtcgccgaggtgaacgat
cgagtgcgcaagtatcaacttcaagatctcaaatgcgtccgcgacggtcgcgtcaaggtc
ggtcacctcggaaatagatgcgcgtgtggcggtttgttcacctgctccgccaaggatggc
tcgctcggcgacgacctgcgcgtcttctccagcatcgccgaagcgcacgatttcaacatc
ctccgcgaaactgtgagctgggtgcgatcgaacgcgttcacgtgtgtacctacgtcgtag

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