KEGG   Ostreococcus tauri: OT_ostta11g01960
Entry
OT_ostta11g01960  CDS       T01358                                 
Name
(RefSeq) Cdk-activating kinase assembly factor MAT1,centre
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
ota  Ostreococcus tauri
Pathway
ota03022  Basal transcription factors
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OT_ostta11g01960
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta11g01960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta11g01960
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta11g01960
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     OT_ostta11g01960
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     OT_ostta11g01960
SSDB
Motif
Pfam: MAT1 DUF2514
Other DBs
NCBI-GeneID: 9833636
NCBI-ProteinID: XP_003082016
OrcAE: OT_ostta11g01960
UniProt: Q00YU0
LinkDB
Position
11:complement(371489..371986)
AA seq 165 aa
MDLARAVRARERVLNAFNREQSDFATLREWNDYLERREELIFNLTEGIDVTATEAAIAEH
RRMHGSEIAALNARRRAASGFGDASGAEADGGYVPETANAMTAMPVPTSAVRRGLEATSL
GYDENTEEGRRARAEAIARACGFDGKAVARLRCVREAFATIWAGA
NT seq 498 nt   +upstreamnt  +downstreamnt
atggacctcgcgcgcgccgttcgcgcgcgagagcgcgtcttgaacgcgttcaaccgcgag
cagagcgatttcgcgacgttacgcgagtggaacgactacctggagcgacgagaggagttg
atcttcaatctgacagaaggcatcgatgtgacggcgacggaggcggcgatcgcggagcac
aggcggatgcacgggagtgagattgcggctttaaatgcgcggcgacgggcggcgagcgga
ttcggggatgcgagtggggcggaggcggatggggggtacgtcccggagacggcgaacgct
atgacggccatgccggtgccgacgagcgcggtgcgacgagggttggaagcgacgagtttg
ggatacgacgagaatacggaagagggacggcgagcgcgagcggaggcgatcgcgcgggcg
tgtgggttcgatgggaaggcggttgcgcggttgcggtgcgttcgagaggcattcgcaacc
atttgggctggtgcgtga

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