Ostreococcus tauri: OT_ostta11g02640
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Entry
OT_ostta11g02640 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ota01009
]
OT_ostta11g02640
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta11g02640
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta11g02640
Protein phosphatases and associated proteins [BR:
ota01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
OT_ostta11g02640
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-60S particles
Helicases
OT_ostta11g02640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
9835916
NCBI-ProteinID:
XP_003082084
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All DBs
Position
11:475428..477344
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AA seq
638 aa
AA seq
DB search
MTFDPRDWAGLMRRASASGVRDGDDGDGDEDSDAVGRRARVFGREPASFEECGLPETMVK
HLVENVGFASPTAVQARTIPRMLAGRDVLVRAETGSGKTLSYIAPLYSKIGGITPRVTRN
EGTRGLVLVPTRELVTQVEDLARRVGRPFHWVVTSSIMGGENRTKEKARLRKGVCLLIAT
PGRLLDHLRMTESFNVDNLRWLVLDEADRLLDLGFEEDLNAILNEIGRRTEGASICTALL
SATLTPGTARLAERMTDPVTVVVEPERDDLEIVGDGDGDGDGDDEGGMDVEGLKRMAKIM
AGGDRVRMPEGLNHTAVEVSMKARLPALAGLLAGWMQGSISKAIVFFSSCESVEFHYKTL
RWLAAGGKGKVEDDDDSVQGPYEIFRLHGLLSQGERSNVFKNFAKTKTGVLLCTDVGARG
LDFIGVGATVQVDPPSDATTYIHRVGRTARLGAAGEAVLFLQPKEREFAEVLTEKGVCFK
KGSAAAMLDVLGGTEDASDRDTRAFADAPHLHPASQRMLRRLQAKIASDARYDALAKDAF
RAHVRAYAAFPSALKHIFHVKRLHLGHCACAFGLRDAPTLIGASATKAALKRARDRAVAD
ARASKSKARDVRVAKKSKKLARGAIDRRPIGVDDAGAT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgatccgagggattgggcggggttgatgcgacgcgcgagcgcgtcgggggtt
cgggacggcgacgacggcgacggcgacgaggattcggacgcggtcggacgccgagcgcgg
gtgttcgggagagaacccgcgagtttcgaggagtgcggacttccggagacgatggtgaaa
catttagtggagaacgtcgggttcgcgtcgccgacggcggtgcaagcgcggacgattccg
cgaatgttggcgggacgcgacgtcttggtccgggcggagactggatcggggaagacgctg
agttacatcgcgcctctgtatagtaaaataggtgggatcacgccgagggtgacgaggaac
gagggcacgcgcgggctcgtgctcgtgccgacgagagagctcgtgacgcaggttgaggat
ttggcgagacgcgtgggacgaccgtttcactgggtcgtgacgagctcgatcatgggcggg
gagaacaggactaaggagaaggcgcgactgaggaaaggggtgtgcttattgatcgccact
ccgggtcggctccttgatcacttgcgcatgacggaatcgttcaacgtcgacaacttgaga
tggctcgtcctcgacgaggcggaccggctattagatttgggattcgaggaggatctgaac
gccattctgaacgagatcggacggcgaacggagggtgcgagcatctgtaccgccctgctc
tccgccacgctcaccccggggacggctcgtctggctgagcgcatgacggaccccgtcacc
gtcgtcgtcgagcccgagcgcgacgacttggaaatcgtcggcgacggcgacggcgacggc
gacggcgacgacgagggtggcatggacgtcgaggggttgaaacgaatggcaaaaatcatg
gcgggtggcgatcgcgtgcgcatgccggagggattgaaccacaccgcggtggaggtttcg
atgaaggctcgactgcccgcgttggcgggtctcctcgcgggttggatgcaaggatccatc
tccaaggcgatcgtcttcttctcatcgtgcgaatccgtggagtttcactacaaaactctc
cgatggctcgccgccgggggcaagggtaaggtggaggacgacgacgattcggtgcaaggc
ccgtacgagattttccgtctgcacggcttgctgagtcaaggcgagcgctcaaacgtgttc
aagaactttgccaagacgaagacgggtgttttgctgtgcaccgacgtcggcgcgcgcggt
ttagatttcatcggcgtcggcgccacggtacaagtcgacccaccgagcgacgcgacgacg
tacattcatcgcgtcggtcgcaccgcccgtctcggcgccgcgggcgaagccgtgctgttc
ttacagcccaaggagcgcgagttcgcggaggttctcaccgaaaaaggcgtgtgcttcaaa
aagggaagcgccgcggcgatgctcgacgtcctgggcggcaccgaggacgcgagcgatcgc
gacacgcgcgccttcgcggacgccccgcatctgcacccggcgtcccagcgcatgctccgt
cgcctccaggcgaaaatcgcctcggacgcgcgatacgacgccctcgccaaggacgcgttc
cgcgcccacgtccgcgcctacgccgccttcccgagcgctctcaagcacatctttcacgtc
aagcgtctgcacctcggccactgcgcctgcgccttcgggctccgcgacgccccgacgctc
atcggcgcctcggcgacaaaggcggcgctcaagcgcgcccgcgaccgcgccgtcgccgac
gcgcgcgcgtccaagtccaaggcgcgcgacgtccgggtcgccaaaaaatcaaagaaactc
gctcggggcgccatcgatcgtcgacccatcggcgtcgacgacgcgggcgcgacgtga
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