Ostreococcus tauri: OT_ostta12g01090
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Entry
OT_ostta12g01090 CDS
T01358
Name
(RefSeq) Radical SAM, alpha/beta horseshoe
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta12g01090
Enzymes [BR:
ota01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OT_ostta12g01090
Ribosome biogenesis [BR:
ota03009
]
Prokaryotic type
ribosomal protein modification factors
OT_ostta12g01090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-GeneID:
9836119
NCBI-ProteinID:
XP_003082261
OrcAE:
OT_ostta12g01090
LinkDB
All DBs
Position
12:<178837..>180204
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AA seq
455 aa
AA seq
DB search
MVSLGCPKNTVDGEVILGDLHANGFEITDDHEAADAIIINSCGFVEDAKNESVEAILEAA
KLRTESGRSDTKIIVTGCLAQRYANDLANELPEADVIVGFENYGNLPRTVGGALGVEATP
GVLLPQQARVQVGGASPPFREETKRLRITPRHYAYLRVAEGCDHKCTFCAIPSFRGRFRS
KPFGAIVDEAKALADSGVRELNLIAEDTNQWGMDLRASDGRGLAELLYALAEVDGIEWMR
ILYAYPSYFSDELIQAIADVPQVCKYIDIPLQHITNLSLLRMNRPPRQHTEDLLYKLRDR
IPGLALRTTFISGFPGETEEEHNELMQFCRDFKFERLGAFAYSEEDGTPAMEYPDQVPED
VRAFRRDQLVSQQQEISEDFAMSRVGKDVDVLIDSWDDDMQAFIGRTTLEAPDIDPVVFV
TEDESKGLPPIKPGQMRKCNIIGSSLFDLEAQPIM
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtctccttagggtgcccgaagaacacggtcgacggggaggtgatcctgggcgatctc
cacgcgaacggattcgagatcacggacgatcacgaggcggcggacgcgatcatcatcaac
tcgtgcggattcgtggaggatgcgaagaatgaaagcgtcgaagccatcttagaggcggcg
aaactgcgcacggagagtggacggagcgatacgaagatcatcgtcacgggatgcctggcg
cagcggtacgcgaacgatctggcgaatgagctgccggaggcggatgtgatcgtcgggttt
gagaattacggaaacttgccgcgcaccgtggggggggcgctcggggtcgaggcgacgccg
ggggtgttgttgccgcagcaggcgcgggtgcaggtgggtggggcgagcccgccgttcaga
gaggagacgaaacggttgagaatcacgccgaggcactacgcgtatcttcgcgtggcggag
ggatgcgatcataagtgcacgttttgcgccattccgagctttcgcggacgcttcaggtcc
aagccgttcggggccatcgtggacgaagcgaaagcgctggcggactctggggtgagggaa
ctgaatctcatcgccgaggatacgaatcagtgggggatggatctgcgagcgagcgatgga
cgcggcttggctgagctcttgtacgcgctcgcggaggttgacggcatcgagtggatgcgc
atcctgtacgcgtacccgtcgtacttttccgacgagctcatccaggccatcgcggacgtt
ccccaggtgtgcaagtatatcgatattccgctgcagcacattacgaatctgtcgctgttg
cgcatgaacagaccgcccagacagcacacggaggatctgttgtacaagcttcgggacagg
attcccggcttggcgcttcgcacaaccttcatcagtgggttcccgggtgaaaccgaggag
gaacacaacgagttgatgcaattctgtagagactttaagtttgagcgcctcggcgcgttc
gcgtacagcgaagaggacgggacgccggcgatggagtacccggaccaagtgccggaggac
gtcagagcgtttcgtcgcgatcaactcgtgtcgcagcagcaagagattagcgaagatttc
gccatgagccgcgtcggtaaggacgtggacgttctgatagatagctgggacgatgatatg
caggcgttcatcgggcgcaccacgctcgaagcgccggatatcgatccagtcgtgttcgtc
acggaggacgaatcgaaaggcttgccgccgatcaagcccggtcaaatgcgcaagtgcaac
atcataggatcgagtctgttcgatctcgaggctcagccaatcatgtaa
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