KEGG   Ostreococcus tauri: OT_ostta12g01180
Entry
OT_ostta12g01180  CDS       T01358                                 
Name
(RefSeq) SKP1 component, POZ domain
  KO
K03872  elongin-C
Organism
ota  Ostreococcus tauri
Pathway
ota04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    OT_ostta12g01180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ota04121]
    OT_ostta12g01180
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta12g01180
Ubiquitin system [BR:ota04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     OT_ostta12g01180
   Cul5 complex
     OT_ostta12g01180
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     OT_ostta12g01180
SSDB
Motif
Pfam: Skp1_POZ BTB DUF7447
Other DBs
NCBI-GeneID: 9836130
NCBI-ProteinID: XP_003082270
OrcAE: OT_ostta12g01180
UniProt: Q00Y35
LinkDB
Position
12:<190096..>190419
AA seq 107 aa
MSAPALDPSTPITLVSREGVEFTVTLGALRVSGVLSRLFASADARDFEEQRTRTVRLRDV
STAIVRKIVEYCEYRQTYEGSNKAPPPFEIAGEDAIELLMTANFLDV
NT seq 324 nt   +upstreamnt  +downstreamnt
atgtccgctccagccctcgacccctcgacgccgataaccctcgtctcgcgcgagggcgtg
gagttcaccgtcaccctcggcgcccttcgcgtctcgggcgtgctctctcggctcttcgcg
agcgccgacgcgagagatttcgaggaacagcgaactcggacggttcgacttcgcgacgtc
tccaccgcgatcgtgcgaaagatcgtcgagtactgcgagtacagacagacttacgaggga
tcaaacaaggcgccgccgccgtttgagatcgccggcgaagacgcgatcgagctgttgatg
acggctaactttttggacgtgtag

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