Ostreococcus tauri: OT_ostta12g02110
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Entry
OT_ostta12g02110 CDS
T01358
Name
(RefSeq) IQ motif, EF-hand binding site
KO
K14569
ribosome biogenesis protein BMS1
Organism
ota
Ostreococcus tauri
Pathway
ota03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OT_ostta12g02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta12g02110
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
90S particles
GTPase
OT_ostta12g02110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
AAA_16
AAA
GTP_EFTU
nSTAND3
NACHT
DUF815
AAA_19
AAA_22
NB-ARC
AAA_28
AAA_30
AAA_11
AAA_5
AAA_33
KAP_NTPase
RNA_helicase
NPHP3_N
Viral_helicase1
AAA_14
AAA_18
NTPase_1
cobW
TsaE
MMR_HSR1
ATPase_2
ATP_bind_1
AAA_17
ABC_tran
Rad17
AAA_25
Motif
Other DBs
NCBI-GeneID:
9836217
NCBI-ProteinID:
XP_003082357
OrcAE:
OT_ostta12g02110
LinkDB
All DBs
Position
12:<353712..>357197
Genome browser
AA seq
1161 aa
AA seq
DB search
MDAVLGSEKPHRAPRAGAKAKKRADAVKRKRADADGGGGGGNNPRAFIFSGARKAKRARA
VAIEKQERKLRAPTKDIVEGEEAPPFVVVVQGPPGVGKTTLVRSLVKHYTRHALNEIKGP
LTLVTGKKRRIQIMEVKNDLNDMVDAAKVADLVLLLVDGSFGFEMETFEFLNVLQVHGFP
RVMGVLTHLDQFHDVKKLKKTKKLLKHRFWTEIYDGAKLFYVSGMSQNGRYNLRDTMNLA
RFISTAKTKPLIWRTSHPYVVGDRFEDITKPELVQDNPVCDREVALYGFLHGCNLKHGQL
VHVAGVGDMAVKEISQLPDPCPLPNKERKQRKLDDKQKLIYAPMSDVGGLLYDKDAVYIT
VDDRQMNFSKRQLEEKLTAEGRALPDDMDVDFGVEMVHGLQDTRMTVDEKLKNSEISLFK
GSKSLKGEDFVKKSAFDVDDDDESDGSDGSGDESGDESDDESDDEDAHFPSRGSKRPGDT
RTRRAADFSEEPERGYEDADSEEDEDERDDNEGLGAGASKWKEMMHGRTREKTLMEIIYD
ETEGTTRAANAGDDDSGSDSDSDSDLFKSRDESDSKVDALDSFDRTKFLPEVRSSLDIDD
PSLRNRFVTGDWDAAKARGEAKPQAENDEDDEVYGDFEDLETGEKFGPGTSGGDDEEEEE
GSEGGADAENEEQKRLEEKRAKHEAMSERTEKSANTKSPNFVDPDGPSSYFELVKNQMRD
ETARSRSILDVLPKSTRQAMEGYRPGAYLRIVLAKAPCEWVENFDPTRPIVIGGILPGEE
IMGFQQLRLKKHRWHRKTLKNRDPLIFSIGWRRFQSIPVYSMMDANSRHRMIKYTPDHMH
CYATFYGPLNPQNTGVIAFQSMASAQASFRVAATATVLEFDHSIKIVKKLKLVGTPIKVF
KNTAFVSGMFNSALEVSRFEGAALRTVSGIRGTIKKALKSGEGVHGQKDGGVKEGSFRAS
FEDKLLLSDIIFLRTWTKVDVPKFYNPVTTAMFKDTKDWRGMKTVGQLRYEKSLPIPVNP
DSIYKPIERQKRVFNKLQIPKALQQALPFKSKPKLEKARRHETLERRRAVVQDKEEKKLT
TMVQQLNTIRNEKMEKRAEQQERRRAVRAKAQAIEDEWRGKLKREKLKSAYREKSKAEAA
AARARESGGKFTNKKKGKSKD
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtgctcgggagcgagaagccccatcgcgccccgcgcgccggggcgaaggcg
aagaaacgcgcggacgcggtgaagcggaagcgcgcggacgcggacggtggcggcggcggt
gggaacaatccgcgggcgttcatcttcagcggcgcgcgaaaggcgaagcgggcgcgcgcg
gtggcgatcgagaagcaagagcgtaagctgcgagcgccgacgaaggatatcgtcgagggt
gaggaggcgccgccgttcgtggtcgtcgttcaagggccgccgggggtggggaagacgacg
ctggtgcggtcgctggtgaagcactacacgagacacgcgttgaatgagataaagggaccg
ctgacgctggtgactggaaagaagcgaaggatacagatcatggaggtgaagaatgatctg
aacgacatggtggacgcggcgaaggttgcggatttggtgttgttgttggtggacggttcg
ttcgggttcgagatggagacgtttgagttcttaaacgtgcttcaggtgcacggattcccg
cgagtgatgggggttttgacgcatctcgatcagtttcacgacgtgaagaagttgaagaag
acgaagaagttgttgaagcatcggttttggacggagatttacgacggggcgaagctgttt
tacgtctcgggcatgtcgcaaaacgggaggtataatcttcgagacacgatgaatctggcg
cgattcatctccacggcgaaaacgaagccgctaatttggcgcacttcgcacccgtacgtc
gtcggcgaccgctttgaggatatcaccaagcccgagctggtgcaggacaatccggtgtgc
gatcgcgaagtcgccctgtacgggttcctacacggctgtaacctgaagcatggacagctc
gtgcacgtcgccggggtcggagacatggcggtcaaagagatatcgcagctccctgatccg
tgcccgctcccgaacaaggagcgaaagcagcgaaagttggatgataaacaaaagcttatt
tacgctccgatgagcgacgtcggcggtttgttgtatgataaagacgccgtgtacatcacc
gtggacgacaggcagatgaacttctcgaagcgtcaattagaagaaaagctcacggcagag
ggtcgagcgttacccgatgatatggacgtcgatttcggggtggagatggtgcacgggttg
caggacacgcgcatgaccgtcgatgaaaagctcaagaatagtgagatctccctcttcaag
gggagtaaatctctcaagggtgaagatttcgtcaagaagagcgcctttgatgtcgacgac
gacgatgagagcgacgggagcgacgggagcggcgatgagagcggcgatgagagcgacgat
gagagcgacgatgaggatgctcactttccatccagaggttcgaagagaccgggggacacc
agaactcgtcgtgctgcagattttagcgaagaaccagaaaggggctatgaagacgccgat
agtgaagaggatgaagacgaacgtgacgataacgaaggcctcggcgctggcgcgtcgaaa
tggaaggaaatgatgcacgggcgaacgcgtgagaagacgctcatggagattatctacgac
gagactgagggcactactagggcagcgaatgcgggtgatgatgattctggatcagattcg
gattccgattcggatctattcaagtctcgggacgagtcggattcaaaggttgacgccctc
gattcgtttgatcgcactaaattcttgccggaagttcgttcgtcgctggatatcgacgac
ccttcgctgcggaacagattcgtcaccggtgattgggacgctgccaaggcaagaggagag
gcgaaaccgcaggctgaaaacgatgaggatgacgaggtttacggagactttgaagatttg
gagaccggtgaaaagtttgggccgggcacgagcggcggagatgacgaagaggaagaggag
gggagcgaaggcggtgcagacgcggaaaacgaagagcaaaagcgtttagaagaaaaacgc
gcgaaacatgaggctatgtcggaacgtactgagaaatcggcaaacacgaagagtccgaac
tttgtcgatcccgatggtccgtcatcgtactttgagttggtgaagaatcaaatgagagat
gaaacggcgagatcgcgctcgatcctcgacgtgttgcccaagagcacgcgacaagccatg
gaaggctaccgtcctggggcgtaccttcgcatcgttctcgccaaggcaccgtgtgaatgg
gtggaaaactttgatcccacccgtcccattgtcatcggcggcatcctccccggcgaggag
atcatgggtttccagcagcttcgtctcaagaagcaccgttggcatcgcaaaacgttgaaa
aaccgagaccctttgatcttctctatcggatggagacgatttcagagcataccggtctac
tccatgatggatgcgaactcgcgacatcgcatgatcaagtacacacctgatcacatgcac
tgctacgcgacgttttacggaccgttgaatccacagaacactggcgtcattgcgttccag
agcatggcctcggcgcaagctagcttccgcgtcgccgcgacggcaactgtactcgagttc
gatcactcgatcaaaatcgtgaagaagctgaaacttgtcggcacgccgatcaaggtgttc
aagaatacggctttcgtctccggaatgttcaactcagctctcgaggtgagccgattcgag
ggtgcggcgcttcgaaccgtctctggtatcagaggtacgatcaagaaggcgctcaaatcc
ggagagggcgtgcacgggcagaaggatggtggcgtcaaagagggcagcttccgcgcctct
ttcgaggacaagcttttgctctcggacatcatcttccttcgaacgtggaccaaggtggac
gtccccaagttctacaacccggtcacgacggccatgttcaaggacacgaaggattggcgc
ggtatgaaaacggtcggtcagctcagatacgaaaagtcgctaccgattccagtcaatccg
gattccatctacaagcccatcgaacgacagaagcgcgtcttcaacaaacttcaaatcccc
aaagctcttcagcaagcgctgccgttcaaatcgaagccgaaactcgagaaagcgcgtcgt
cacgagacgctcgagcgtcgtcgcgccgtggtccaggacaaggaggagaagaagctcacc
accatggtgcagcagctcaacacgattcgcaacgaaaagatggaaaaacgcgccgagcag
caagaacgccgtcgcgctgtgcgcgccaaggcgcaggcgatcgaggacgagtggcgaggc
aaactcaagagagagaaactcaagagcgcgtaccgcgagaagagcaaggcagaggccgcc
gcggcgcgcgcgcgagagtctggtggaaaatttacgaacaagaagaaaggaaagtcaaag
gattga
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integrated database retrieval system