KEGG   Ostreococcus tauri: OT_ostta12g02110
Entry
OT_ostta12g02110  CDS       T01358                                 
Name
(RefSeq) IQ motif, EF-hand binding site
  KO
K14569  ribosome biogenesis protein BMS1
Organism
ota  Ostreococcus tauri
Pathway
ota03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    OT_ostta12g02110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ota03009]
    OT_ostta12g02110
Ribosome biogenesis [BR:ota03009]
 Eukaryotic type
  90S particles
   GTPase
    OT_ostta12g02110
SSDB
Motif
Pfam: RIBIOP_C AARP2CN Tsr1_G-like AAA_16 AAA GTP_EFTU nSTAND3 NACHT DUF815 AAA_19 AAA_22 NB-ARC AAA_28 AAA_30 AAA_11 AAA_5 AAA_33 KAP_NTPase RNA_helicase NPHP3_N Viral_helicase1 AAA_14 AAA_18 NTPase_1 cobW TsaE MMR_HSR1 ATPase_2 ATP_bind_1 AAA_17 ABC_tran Rad17 AAA_25
Other DBs
NCBI-GeneID: 9836217
NCBI-ProteinID: XP_003082357
OrcAE: OT_ostta12g02110
LinkDB
Position
12:<353712..>357197
AA seq 1161 aa
MDAVLGSEKPHRAPRAGAKAKKRADAVKRKRADADGGGGGGNNPRAFIFSGARKAKRARA
VAIEKQERKLRAPTKDIVEGEEAPPFVVVVQGPPGVGKTTLVRSLVKHYTRHALNEIKGP
LTLVTGKKRRIQIMEVKNDLNDMVDAAKVADLVLLLVDGSFGFEMETFEFLNVLQVHGFP
RVMGVLTHLDQFHDVKKLKKTKKLLKHRFWTEIYDGAKLFYVSGMSQNGRYNLRDTMNLA
RFISTAKTKPLIWRTSHPYVVGDRFEDITKPELVQDNPVCDREVALYGFLHGCNLKHGQL
VHVAGVGDMAVKEISQLPDPCPLPNKERKQRKLDDKQKLIYAPMSDVGGLLYDKDAVYIT
VDDRQMNFSKRQLEEKLTAEGRALPDDMDVDFGVEMVHGLQDTRMTVDEKLKNSEISLFK
GSKSLKGEDFVKKSAFDVDDDDESDGSDGSGDESGDESDDESDDEDAHFPSRGSKRPGDT
RTRRAADFSEEPERGYEDADSEEDEDERDDNEGLGAGASKWKEMMHGRTREKTLMEIIYD
ETEGTTRAANAGDDDSGSDSDSDSDLFKSRDESDSKVDALDSFDRTKFLPEVRSSLDIDD
PSLRNRFVTGDWDAAKARGEAKPQAENDEDDEVYGDFEDLETGEKFGPGTSGGDDEEEEE
GSEGGADAENEEQKRLEEKRAKHEAMSERTEKSANTKSPNFVDPDGPSSYFELVKNQMRD
ETARSRSILDVLPKSTRQAMEGYRPGAYLRIVLAKAPCEWVENFDPTRPIVIGGILPGEE
IMGFQQLRLKKHRWHRKTLKNRDPLIFSIGWRRFQSIPVYSMMDANSRHRMIKYTPDHMH
CYATFYGPLNPQNTGVIAFQSMASAQASFRVAATATVLEFDHSIKIVKKLKLVGTPIKVF
KNTAFVSGMFNSALEVSRFEGAALRTVSGIRGTIKKALKSGEGVHGQKDGGVKEGSFRAS
FEDKLLLSDIIFLRTWTKVDVPKFYNPVTTAMFKDTKDWRGMKTVGQLRYEKSLPIPVNP
DSIYKPIERQKRVFNKLQIPKALQQALPFKSKPKLEKARRHETLERRRAVVQDKEEKKLT
TMVQQLNTIRNEKMEKRAEQQERRRAVRAKAQAIEDEWRGKLKREKLKSAYREKSKAEAA
AARARESGGKFTNKKKGKSKD
NT seq 3486 nt   +upstreamnt  +downstreamnt
atggacgccgtgctcgggagcgagaagccccatcgcgccccgcgcgccggggcgaaggcg
aagaaacgcgcggacgcggtgaagcggaagcgcgcggacgcggacggtggcggcggcggt
gggaacaatccgcgggcgttcatcttcagcggcgcgcgaaaggcgaagcgggcgcgcgcg
gtggcgatcgagaagcaagagcgtaagctgcgagcgccgacgaaggatatcgtcgagggt
gaggaggcgccgccgttcgtggtcgtcgttcaagggccgccgggggtggggaagacgacg
ctggtgcggtcgctggtgaagcactacacgagacacgcgttgaatgagataaagggaccg
ctgacgctggtgactggaaagaagcgaaggatacagatcatggaggtgaagaatgatctg
aacgacatggtggacgcggcgaaggttgcggatttggtgttgttgttggtggacggttcg
ttcgggttcgagatggagacgtttgagttcttaaacgtgcttcaggtgcacggattcccg
cgagtgatgggggttttgacgcatctcgatcagtttcacgacgtgaagaagttgaagaag
acgaagaagttgttgaagcatcggttttggacggagatttacgacggggcgaagctgttt
tacgtctcgggcatgtcgcaaaacgggaggtataatcttcgagacacgatgaatctggcg
cgattcatctccacggcgaaaacgaagccgctaatttggcgcacttcgcacccgtacgtc
gtcggcgaccgctttgaggatatcaccaagcccgagctggtgcaggacaatccggtgtgc
gatcgcgaagtcgccctgtacgggttcctacacggctgtaacctgaagcatggacagctc
gtgcacgtcgccggggtcggagacatggcggtcaaagagatatcgcagctccctgatccg
tgcccgctcccgaacaaggagcgaaagcagcgaaagttggatgataaacaaaagcttatt
tacgctccgatgagcgacgtcggcggtttgttgtatgataaagacgccgtgtacatcacc
gtggacgacaggcagatgaacttctcgaagcgtcaattagaagaaaagctcacggcagag
ggtcgagcgttacccgatgatatggacgtcgatttcggggtggagatggtgcacgggttg
caggacacgcgcatgaccgtcgatgaaaagctcaagaatagtgagatctccctcttcaag
gggagtaaatctctcaagggtgaagatttcgtcaagaagagcgcctttgatgtcgacgac
gacgatgagagcgacgggagcgacgggagcggcgatgagagcggcgatgagagcgacgat
gagagcgacgatgaggatgctcactttccatccagaggttcgaagagaccgggggacacc
agaactcgtcgtgctgcagattttagcgaagaaccagaaaggggctatgaagacgccgat
agtgaagaggatgaagacgaacgtgacgataacgaaggcctcggcgctggcgcgtcgaaa
tggaaggaaatgatgcacgggcgaacgcgtgagaagacgctcatggagattatctacgac
gagactgagggcactactagggcagcgaatgcgggtgatgatgattctggatcagattcg
gattccgattcggatctattcaagtctcgggacgagtcggattcaaaggttgacgccctc
gattcgtttgatcgcactaaattcttgccggaagttcgttcgtcgctggatatcgacgac
ccttcgctgcggaacagattcgtcaccggtgattgggacgctgccaaggcaagaggagag
gcgaaaccgcaggctgaaaacgatgaggatgacgaggtttacggagactttgaagatttg
gagaccggtgaaaagtttgggccgggcacgagcggcggagatgacgaagaggaagaggag
gggagcgaaggcggtgcagacgcggaaaacgaagagcaaaagcgtttagaagaaaaacgc
gcgaaacatgaggctatgtcggaacgtactgagaaatcggcaaacacgaagagtccgaac
tttgtcgatcccgatggtccgtcatcgtactttgagttggtgaagaatcaaatgagagat
gaaacggcgagatcgcgctcgatcctcgacgtgttgcccaagagcacgcgacaagccatg
gaaggctaccgtcctggggcgtaccttcgcatcgttctcgccaaggcaccgtgtgaatgg
gtggaaaactttgatcccacccgtcccattgtcatcggcggcatcctccccggcgaggag
atcatgggtttccagcagcttcgtctcaagaagcaccgttggcatcgcaaaacgttgaaa
aaccgagaccctttgatcttctctatcggatggagacgatttcagagcataccggtctac
tccatgatggatgcgaactcgcgacatcgcatgatcaagtacacacctgatcacatgcac
tgctacgcgacgttttacggaccgttgaatccacagaacactggcgtcattgcgttccag
agcatggcctcggcgcaagctagcttccgcgtcgccgcgacggcaactgtactcgagttc
gatcactcgatcaaaatcgtgaagaagctgaaacttgtcggcacgccgatcaaggtgttc
aagaatacggctttcgtctccggaatgttcaactcagctctcgaggtgagccgattcgag
ggtgcggcgcttcgaaccgtctctggtatcagaggtacgatcaagaaggcgctcaaatcc
ggagagggcgtgcacgggcagaaggatggtggcgtcaaagagggcagcttccgcgcctct
ttcgaggacaagcttttgctctcggacatcatcttccttcgaacgtggaccaaggtggac
gtccccaagttctacaacccggtcacgacggccatgttcaaggacacgaaggattggcgc
ggtatgaaaacggtcggtcagctcagatacgaaaagtcgctaccgattccagtcaatccg
gattccatctacaagcccatcgaacgacagaagcgcgtcttcaacaaacttcaaatcccc
aaagctcttcagcaagcgctgccgttcaaatcgaagccgaaactcgagaaagcgcgtcgt
cacgagacgctcgagcgtcgtcgcgccgtggtccaggacaaggaggagaagaagctcacc
accatggtgcagcagctcaacacgattcgcaacgaaaagatggaaaaacgcgccgagcag
caagaacgccgtcgcgctgtgcgcgccaaggcgcaggcgatcgaggacgagtggcgaggc
aaactcaagagagagaaactcaagagcgcgtaccgcgagaagagcaaggcagaggccgcc
gcggcgcgcgcgcgagagtctggtggaaaatttacgaacaagaagaaaggaaagtcaaag
gattga

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