Ostreococcus tauri: OT_ostta12g02840
Help
Entry
OT_ostta12g02840 CDS
T01358
Name
(RefSeq) Zinc finger, CW-type
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ota
Ostreococcus tauri
Pathway
ota03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
OT_ostta12g02840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta12g02840
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta12g02840
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
OT_ostta12g02840
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
OT_ostta12g02840
RSF complex
OT_ostta12g02840
WICH complex
OT_ostta12g02840
B-WICH complex
OT_ostta12g02840
NORC complex
OT_ostta12g02840
BRF complex
OT_ostta12g02840
NuRF complex (fruit fly)
OT_ostta12g02840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-CW
ResIII
SAND
DEAD
PTM_DIR17_Tudor
HDA2-3
PHD
C5HCH
TFIIA
Motif
Other DBs
NCBI-GeneID:
9836055
NCBI-ProteinID:
XP_022840135
OrcAE:
OT_ostta12g02840
UniProt:
A0A090MB60
LinkDB
All DBs
Position
12:complement(471991..478674)
Genome browser
AA seq
2227 aa
AA seq
DB search
MASSDGTMMGLPGRAVRADGGDGREDGDAVVGLPSKRARDQETIDEIPPDVLAEALGARR
SGRKTKARVIMIDGEPVLRSNNYTLTEGEPSVFDSELGTDGAVAGEDGRTKYVFEQQKEK
RTYVRKKPRAPKVETDDEIKAGKNNRAIAKAIDEAHARRSKYLKAQIKHLEPFITPAVKS
SIFDRAEAYDASQKGPQKVLMPVDNQPAMIKAVLREYQLEGLRYNVGMYDQGCSCILADE
MGLGKTLQSISFICALKEMRHANGPHLVVCPLSVLSSWMDELQKWAPTLRVVRLHSGDEN
ERARLRKEVVPNTESYDVAVTTYEMACNPAFNVTLTQKVMWRTMILDEGHRVKNEETAAH
QVLKRVKRQHTLLLTGTPIQNNLHELYAILSFLHPDIFTSSEPFDRAFNLNTSEHKVDSD
LLEKAHFLMRPFILRRVKGEVEVSLPPKTETKIMCPLSEAQTFWYRRLLLREATALQSLE
KATKGEGGADNFQKLNSLLMQLRKCCNHPFLFSGTDVPEDGVPVEELIEASGKLAVLDRM
MQKLMEGGHRVVLFSQFTSMLDILQDFLTLRGYRYARLDGSTNRVQRSIDIAAFNRPDSP
LFAFLLSTRAGGLGVNLQTADTCILFDSDWNPQVDLQAMARVHRIGQKKEVHIYRLVTAG
TVEERMTQRAEKKLFLEQMVSRGSTKAATESDSLDRNDLYAMLRFGVDAVFSKSSGDPPT
DEELDILMDRSSKGADRRAKLTNLQADVTTAEDYIEGKAEAAPISTFMLPTAIASALGVS
EDAVSEAKSKQYKSVKDIADEFNSNILLGKRSRTKTTMEIDGHTVLKVNNYSMEDGEPSV
HEREARNMEGKSKPESKKPRSQIAGRDYGHSSVCQSCWDGGEIVCCDLCPVSVHPDCIGI
TMKDITRYHRWSCPHHSCHECGRKAAAVGGILFRCEACPRAFCEDHLPGTAEIIGQCKRF
QDLGQNHPAQACFIHCDAECAKWAASHIAEEYGKTAEGWTIGKKVAITDHWIEDRDAELE
LPVENGTRTKPLAHATFTDLVQFLLRNEGPKKGGKKKKVKKAGVEDVIDPQPGDLLEMRG
VLCYYTRQGENVAHVSEMHNVDWRDIITWNTDWVPGSFYGKGTYLLEGTRLWLAPPPRKT
LDELSEEERIKRVQEEREAAMVAAAMGLPGASQMLNEGEVTVLGRGLKGLRQKDLLPSER
DEIVTEMFKRVRPLLEKKIIAEQREREEEVKRAAKDAEKDKFKSAERNARTARRGDGLPS
DSFLAADLTTGDRIPSRRGAPPPIPAVHGGQITKDTLTAIKDAILRSLHMANATKNGDYC
PAMMLMVRLSRGHAGTPLLNNMRMRWTSTAGEDMGFILGLIALERDGSLEMELHHKYPEN
IELAALRLSAKAKVPAKPKGELSQEAPKQSRATASQFVLSDVEVRVQCGDLDGILRPGAK
RGDESVEYVDSKGNTSLVPAVEFERLGGRGSTRKWRQSIRLAVEGVSAAQITDDSTRGVP
IGKYLRDEGAAYRESVIGRVLEVWSTEVEQYSPGMVIDYKADSGEHEILYHDGNREWIYF
CMTQTRWPDGLPARLELTEKQGKKPSEKPEKEPKRGRQATSVSAEAIIDGYRVYVLGEKS
TIEQVSAETGVAEDDLVEFNAPYFSKLSATTKLPEETKVYLQHGPDPEELEASKLVESAL
EESKNAEIESRAKEAAKMAAKEAKELEKAKAKERAAKEKAKAKEKAAKAKAKAKAKAKAK
EKAKKAAASKKGKSAKKGSASKKGKKQEDADDEDFQDDDYESEEEEEDDDEYNSDEDFDE
EDDDEEFTMKKSSKRSKYTEEELLAMAVAEFQLELEAQCVVRGSAIPIECGGLTAVLTGG
NLTVLYSDSKKKSALTDMDLGAFMKLAKQNGHWQEEVKYNGAGEMKGEPIIHYLAMRGLA
IGRSVIGSNVDILPKPEDMQFMPAKIISFDEATGSHEVRYFGKGEDELEQIYLPLATIRW
LPKLWEPYSAPEAVKVPDAEGGIVFALRPIPVGCGGMRGILLPGGKRGEEMVRYCLMRRE
RERCVVDELTIPATEFERLSGKGTAKKWRQSVRILEPDYKLGDTVSKLLKAVGEVLGANV
VGREVEVFWPGDECFYYGTVDGFRPESGEHEVVYDDGNKEILQIAMQTVRWGPTATVRKG
SSTSRVTSKPKEKPKTSWIQCDACQKWRIVPQSYMDTLGDDDAWKCQMNPDSAKSARGCD
APEDNED
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagcgatgggacgatgatgggacttccgggacgggcggtgcgcgcggatggg
ggggacgggcgggaggacggagacgccgtcgtcgggttgccgtcgaaacgcgcgcgagac
caggagacgatcgatgagattcccccggacgtgctcgcggaggcgctgggggcgagacgg
tcggggcggaagacgaaggcgcgggtgatcatgattgacggtgagccggtgttgaggtcg
aataattacacgttgaccgaaggcgagccgagcgtgttcgactccgagttaggaaccgac
ggcgcggttgcgggagaggatgggcggacgaagtacgtgttcgagcaacagaaggagaag
cgaacgtacgtgcggaagaagccgagagcgcccaaggttgagacggatgacgagatcaag
gctggaaagaacaatagagcaatcgcgaaagccatcgatgaagcacacgcgcgacgatca
aagtacttgaaggcgcaaatcaagcacttggagccgttcatcacgccggcggtgaagagc
tcaatctttgatcgagccgaggcgtacgatgcgtcgcaaaagggtccgcagaaagtactc
atgccggtggataaccaacccgcgatgatcaaagcagtgttgagagagtatcaactcgaa
ggtttgcgctacaacgtcggaatgtacgatcaaggctgctcttgcatcctcgcggatgag
atgggcttgggtaagacgttacaatcgatctcgttcatttgtgcgctgaaggagatgcgt
cacgccaacggaccgcatttggttgtctgtcccttgtcggtgctgtcgtcttggatggac
gagctgcagaagtgggcgccgacgcttcgagtcgttcgtttgcattccggggatgaaaac
gaacgtgctcgcttgcgtaaagaggtcgttccaaacactgagtcgtacgacgtcgcggtc
acgacgtacgagatggcgtgcaacccggctttcaatgttacattgacacaaaaggtgatg
tggcgcacgatgattctggacgagggacatcgagtgaagaatgaagagacggcagctcat
caggtactgaagcgcgtaaagcgtcaacacacgcttcttcttaccggtacgcccattcag
aacaacttgcacgaattgtacgccattctttccttccttcatccggacatcttcacttcg
agtgagccgttcgacagggcgttcaacttgaacacctccgagcacaaggttgattctgat
ctgctagaaaaggcgcacttcttgatgcgtccgttcattttgcgacgcgtcaagggagaa
gtcgaggtatctcttccgccgaagacggagacgaaaattatgtgccctctctctgaggcg
cagaccttctggtatcgtcgtctgctgcttcgcgaggcgaccgctttacagtcactcgaa
aaagcgacaaaaggcgagggtggcgcggacaacttccaaaagctcaactcactgcttatg
cagctccgaaagtgctgcaatcacccgttcttgttctccggtaccgacgtccctgaggat
ggcgttccggttgaagagctcatcgaggcgtctggaaagctcgcggtgctcgatcgcatg
atgcaaaagctcatggaaggtggccatagagtggtgctcttctctcagttcacatctatg
ctcgatatcctgcaagatttcttgacgttgaggggttacagatacgctcgcttggatgga
tcgacaaatcgagtgcagcgatccatcgacattgccgccttcaaccgtccagactcgccg
ttgtttgccttcttactttccacgcgtgccggtggtttgggcgtcaaccttcaaaccgct
gacacgtgcatcttgttcgacagcgattggaaccctcaggtggatcttcaagcgatggca
cgggtgcatcgtattggacagaaaaaggaagtgcacatctaccgactcgtcaccgctggt
accgttgaggagcgcatgacgcagcgcgcggagaagaagctgttcttagagcagatggtt
tctcgtggctccaccaaagctgcaactgaatccgacagtctcgacagaaatgatctgtat
gcaatgttgcgctttggcgtcgatgcggtcttcagtaaatcaagcggcgatccgccgaca
gatgaagagttggacattctcatggatcgctcttcgaagggcgcggatcggcgcgcgaag
ctcaccaacctccaggctgacgtgacgactgccgaagactacatcgaaggtaaggctgag
gctgcgccaatctcaacgtttatgcttccaaccgcgatcgcaagtgccctgggtgtgagc
gaagatgcggtgagcgaggctaagtcgaaacagtacaagtccgtcaaggatatcgccgat
gagttcaactccaatattctgctcggtaagcgttctcgaacgaagacaacgatggaaatc
gatggccacactgtgttgaaggtgaacaattacagcatggaggatggtgagccgtccgta
cacgagcgcgaggcgcgaaacatggagggaaaatcgaaaccggaatcaaagaaaccgcgc
tctcaaatcgctggcagagactacggccacagctcggtgtgccaatcgtgctgggacggc
ggcgagatcgtgtgttgtgatttgtgcccggtctccgtccacccggattgcatcggcatc
acaatgaaggatatcacgcgctaccatagatggtcatgtccgcaccactcgtgccacgag
tgtgggcgcaaggctgcagcggtgggtggtatcttgttccgttgcgaggcgtgcccgcgg
gcgttctgcgaggatcacttgccagggaccgcggagatcatcggtcagtgcaagcgtttc
caagatttgggccagaaccaccctgcgcaagcgtgcttcatccactgcgacgccgagtgt
gcgaaatgggccgcgtctcacatcgctgaagagtacggtaaaactgctgaaggttggacc
atcggtaagaaggttgcgataaccgatcactggatcgaggatcgcgacgcggaactcgag
cttccggtggagaatggaacgcgaacgaaaccgctggcacatgcgaccttcactgatctc
gtccagttcttacttcgaaacgagggtccgaagaagggaggaaagaagaagaaagtgaaa
aaagcgggcgtcgaagacgtcatcgatccgcagccgggagatttgttggagatgcgtggc
gtgttgtgctattacaccaggcaaggcgagaacgtcgctcacgtctcagaaatgcacaac
gtggattggcgagacatcatcacgtggaacacagactgggtgcccgggtctttctatgga
aaaggaacgtacctcttggaggggactcgtctttggctcgctccgccgccgcgtaagacg
cttgacgagctctcagaggaggaacgcatcaagcgcgtgcaagaggagcgtgaagccgcc
atggtcgccgctgcgatgggtttacccggtgcttctcagatgttgaacgaaggcgaagtg
accgtccttggtcgaggtctaaagggtctgcgtcagaaagatctcttgccttcggagcgt
gatgaaatcgtgactgagatgttcaagcgagtgcgcccactcttggagaaaaagatcatc
gcagagcaaagagaacgggaagaagaagtcaagcgcgccgccaaggatgcggagaaagat
aaattcaaatcggctgaacgcaacgctcgtaccgcgcgacgcggtgacggtttgccctcg
gattctttcctcgccgctgatctcaccacgggcgatcgcataccatcaaggcgcggcgcg
ccaccgccgattccagctgttcatggtggtcaaatcacgaaagacactctcacagcgatc
aaggatgccattcttcgaagcctacacatggcaaacgcgacgaagaacggtgactattgc
cctgcgatgatgctcatggtacgtctctcgcgcggtcacgctgggactccgttgctgaat
aacatgcggatgcgttggacctccaccgcgggtgaagacatgggattcatcttaggcctg
atcgcccttgaacgtgatggctcgcttgagatggaacttcatcacaagtacccggagaac
attgaactcgcggcgcttcgattgtcagccaaggccaaggtaccggccaaaccaaagggc
gaactctcgcaagaggccccgaagcagtcccgcgcgacggcttcgcaatttgtgctgagc
gacgtcgaggtgagagtgcagtgtggagatctcgatggtatcctccgtccaggtgccaag
cgtggggacgaaagcgttgagtacgttgattccaaggggaacacgagcttggtgccggcg
gtagagtttgagcgtttgggaggtcggggctcgacgcgcaagtggcgccagtccatccgt
ctcgccgttgagggtgtttcagcggctcagatcacggacgatagcactcgaggtgttccg
attggcaaatacctgcgcgacgaaggcgcggcgtatcgcgagagtgttatcggacgcgtc
ttggaagtttggtccaccgaggtcgagcagtactctcctggcatggtgatcgattacaaa
gccgactccggtgagcacgaaatcctttatcacgatggaaaccgcgagtggatttacttt
tgcatgacgcaaacgcgatggccagacggtttgcccgctcgtctcgaactgacggaaaag
caaggaaagaaaccgagcgaaaaaccagagaaggagccgaagcgcgggcgtcaagcgacg
agcgtttcggccgaagccatcatcgacggctatcgtgtctacgttcttggcgaaaagtcg
accattgaacaagtgtccgctgaaacgggcgtcgcggaggatgatctcgtcgagttcaac
gctccgtacttttcaaagctcagtgccacgaccaagttacctgaggaaacgaaggtgtac
ctgcaacacggcccggatcccgaggagctcgaggctagtaagctcgtcgagtcggcgtta
gaagagtcaaagaacgcagagattgagtcgagggcgaaagaggcggccaagatggcggcc
aaggaagccaaggaactcgagaaggccaaggcgaaagaaagggcggccaaggagaaggcg
aaagccaaggaaaaggctgccaaggccaaggccaaggccaaggccaaggccaaggccaag
gagaaggcgaagaaagccgccgcgtcgaagaagggcaagtcggccaagaaaggctccgcg
tcgaagaagggtaagaagcaagaagatgcggacgatgaagacttccaggatgatgattac
gagtccgaagaagaggaggaagatgacgacgagtacaattccgacgaagacttcgacgag
gaagacgacgatgaagagttcaccatgaagaaatcgtctaaacgctccaagtacaccgaa
gaagaattgctcgccatggcggtggccgagttccaacttgaactcgaagcgcagtgcgtt
gttcgcgggagcgccattccgatagagtgcggtggactcaccgccgtgcttaccggtggt
aacctgacggttctttactcggactcgaagaagaaatcggcgctcactgatatggatctc
ggggcgttcatgaagctcgccaagcaaaacggccactggcaagaggaggtgaaatacaac
ggcgcgggcgagatgaagggcgaaccgatcattcactacctcgccatgcgcggcctcgcc
atcggacgatccgtcatcggcagcaacgtggatatcctcccgaaaccggaggacatgcag
ttcatgcctgcgaagatcatcagcttcgacgaagccacaggttcgcacgaagtgagatac
tttggtaagggcgaagatgagttggaacagatttatcttcctcttgcgacgatccgctgg
ttaccgaagttgtgggagccgtattccgccccggaagccgtcaaggtgccagacgcagag
ggcggaatcgtcttcgcactgagaccgatccctgtcgggtgcggcggtatgcgcggtatc
ttgcttccgggtggtaagcgcggcgaagagatggtgcgatactgtctcatgcgtcgtgag
agagaacgatgcgtcgttgacgagctcactatcccggcgaccgagtttgaacgcttgagt
ggtaagggcacggcaaagaaatggcgccaatcggtccgcattctagaacccgactacaaa
ctcggtgacaccgttagcaaactactcaaggcggtcggcgaagtcttgggagcgaacgtg
gtcgggcgcgaggtcgaggttttctggccaggcgatgagtgcttctattacggcaccgtc
gatggtttcaggccggaatccggcgagcatgaggttgtttacgatgatggaaacaaggaa
atcttacagattgccatgcaaaccgtgcgatgggggccgacggcgacggtgcgaaaggga
tcgtccacgtcgcgcgtgacgtcgaaaccaaaggaaaagccgaagacatcctggattcag
tgcgatgcctgccaaaagtggcgcattgtcccacaaagttacatggacacgcttggcgac
gacgatgcgtggaagtgccagatgaatccggactcggcgaagagcgctcgcggttgcgac
gctccagaggacaacgaagattag
DBGET
integrated database retrieval system