KEGG   Ostreococcus tauri: OT_ostta12g02840
Entry
OT_ostta12g02840  CDS       T01358                                 
Name
(RefSeq) Zinc finger, CW-type
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ota  Ostreococcus tauri
Pathway
ota03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    OT_ostta12g02840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta12g02840
   03036 Chromosome and associated proteins [BR:ota03036]
    OT_ostta12g02840
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     OT_ostta12g02840
Chromosome and associated proteins [BR:ota03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    OT_ostta12g02840
   RSF complex
    OT_ostta12g02840
   WICH complex
    OT_ostta12g02840
   B-WICH complex
    OT_ostta12g02840
   NORC complex
    OT_ostta12g02840
   BRF complex
    OT_ostta12g02840
   NuRF complex (fruit fly)
    OT_ostta12g02840
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-CW ResIII SAND DEAD PTM_DIR17_Tudor HDA2-3 PHD C5HCH TFIIA
Other DBs
NCBI-GeneID: 9836055
NCBI-ProteinID: XP_022840135
OrcAE: OT_ostta12g02840
UniProt: A0A090MB60
LinkDB
Position
12:complement(471991..478674)
AA seq 2227 aa
MASSDGTMMGLPGRAVRADGGDGREDGDAVVGLPSKRARDQETIDEIPPDVLAEALGARR
SGRKTKARVIMIDGEPVLRSNNYTLTEGEPSVFDSELGTDGAVAGEDGRTKYVFEQQKEK
RTYVRKKPRAPKVETDDEIKAGKNNRAIAKAIDEAHARRSKYLKAQIKHLEPFITPAVKS
SIFDRAEAYDASQKGPQKVLMPVDNQPAMIKAVLREYQLEGLRYNVGMYDQGCSCILADE
MGLGKTLQSISFICALKEMRHANGPHLVVCPLSVLSSWMDELQKWAPTLRVVRLHSGDEN
ERARLRKEVVPNTESYDVAVTTYEMACNPAFNVTLTQKVMWRTMILDEGHRVKNEETAAH
QVLKRVKRQHTLLLTGTPIQNNLHELYAILSFLHPDIFTSSEPFDRAFNLNTSEHKVDSD
LLEKAHFLMRPFILRRVKGEVEVSLPPKTETKIMCPLSEAQTFWYRRLLLREATALQSLE
KATKGEGGADNFQKLNSLLMQLRKCCNHPFLFSGTDVPEDGVPVEELIEASGKLAVLDRM
MQKLMEGGHRVVLFSQFTSMLDILQDFLTLRGYRYARLDGSTNRVQRSIDIAAFNRPDSP
LFAFLLSTRAGGLGVNLQTADTCILFDSDWNPQVDLQAMARVHRIGQKKEVHIYRLVTAG
TVEERMTQRAEKKLFLEQMVSRGSTKAATESDSLDRNDLYAMLRFGVDAVFSKSSGDPPT
DEELDILMDRSSKGADRRAKLTNLQADVTTAEDYIEGKAEAAPISTFMLPTAIASALGVS
EDAVSEAKSKQYKSVKDIADEFNSNILLGKRSRTKTTMEIDGHTVLKVNNYSMEDGEPSV
HEREARNMEGKSKPESKKPRSQIAGRDYGHSSVCQSCWDGGEIVCCDLCPVSVHPDCIGI
TMKDITRYHRWSCPHHSCHECGRKAAAVGGILFRCEACPRAFCEDHLPGTAEIIGQCKRF
QDLGQNHPAQACFIHCDAECAKWAASHIAEEYGKTAEGWTIGKKVAITDHWIEDRDAELE
LPVENGTRTKPLAHATFTDLVQFLLRNEGPKKGGKKKKVKKAGVEDVIDPQPGDLLEMRG
VLCYYTRQGENVAHVSEMHNVDWRDIITWNTDWVPGSFYGKGTYLLEGTRLWLAPPPRKT
LDELSEEERIKRVQEEREAAMVAAAMGLPGASQMLNEGEVTVLGRGLKGLRQKDLLPSER
DEIVTEMFKRVRPLLEKKIIAEQREREEEVKRAAKDAEKDKFKSAERNARTARRGDGLPS
DSFLAADLTTGDRIPSRRGAPPPIPAVHGGQITKDTLTAIKDAILRSLHMANATKNGDYC
PAMMLMVRLSRGHAGTPLLNNMRMRWTSTAGEDMGFILGLIALERDGSLEMELHHKYPEN
IELAALRLSAKAKVPAKPKGELSQEAPKQSRATASQFVLSDVEVRVQCGDLDGILRPGAK
RGDESVEYVDSKGNTSLVPAVEFERLGGRGSTRKWRQSIRLAVEGVSAAQITDDSTRGVP
IGKYLRDEGAAYRESVIGRVLEVWSTEVEQYSPGMVIDYKADSGEHEILYHDGNREWIYF
CMTQTRWPDGLPARLELTEKQGKKPSEKPEKEPKRGRQATSVSAEAIIDGYRVYVLGEKS
TIEQVSAETGVAEDDLVEFNAPYFSKLSATTKLPEETKVYLQHGPDPEELEASKLVESAL
EESKNAEIESRAKEAAKMAAKEAKELEKAKAKERAAKEKAKAKEKAAKAKAKAKAKAKAK
EKAKKAAASKKGKSAKKGSASKKGKKQEDADDEDFQDDDYESEEEEEDDDEYNSDEDFDE
EDDDEEFTMKKSSKRSKYTEEELLAMAVAEFQLELEAQCVVRGSAIPIECGGLTAVLTGG
NLTVLYSDSKKKSALTDMDLGAFMKLAKQNGHWQEEVKYNGAGEMKGEPIIHYLAMRGLA
IGRSVIGSNVDILPKPEDMQFMPAKIISFDEATGSHEVRYFGKGEDELEQIYLPLATIRW
LPKLWEPYSAPEAVKVPDAEGGIVFALRPIPVGCGGMRGILLPGGKRGEEMVRYCLMRRE
RERCVVDELTIPATEFERLSGKGTAKKWRQSVRILEPDYKLGDTVSKLLKAVGEVLGANV
VGREVEVFWPGDECFYYGTVDGFRPESGEHEVVYDDGNKEILQIAMQTVRWGPTATVRKG
SSTSRVTSKPKEKPKTSWIQCDACQKWRIVPQSYMDTLGDDDAWKCQMNPDSAKSARGCD
APEDNED
NT seq 6684 nt   +upstreamnt  +downstreamnt
atggcgtcgagcgatgggacgatgatgggacttccgggacgggcggtgcgcgcggatggg
ggggacgggcgggaggacggagacgccgtcgtcgggttgccgtcgaaacgcgcgcgagac
caggagacgatcgatgagattcccccggacgtgctcgcggaggcgctgggggcgagacgg
tcggggcggaagacgaaggcgcgggtgatcatgattgacggtgagccggtgttgaggtcg
aataattacacgttgaccgaaggcgagccgagcgtgttcgactccgagttaggaaccgac
ggcgcggttgcgggagaggatgggcggacgaagtacgtgttcgagcaacagaaggagaag
cgaacgtacgtgcggaagaagccgagagcgcccaaggttgagacggatgacgagatcaag
gctggaaagaacaatagagcaatcgcgaaagccatcgatgaagcacacgcgcgacgatca
aagtacttgaaggcgcaaatcaagcacttggagccgttcatcacgccggcggtgaagagc
tcaatctttgatcgagccgaggcgtacgatgcgtcgcaaaagggtccgcagaaagtactc
atgccggtggataaccaacccgcgatgatcaaagcagtgttgagagagtatcaactcgaa
ggtttgcgctacaacgtcggaatgtacgatcaaggctgctcttgcatcctcgcggatgag
atgggcttgggtaagacgttacaatcgatctcgttcatttgtgcgctgaaggagatgcgt
cacgccaacggaccgcatttggttgtctgtcccttgtcggtgctgtcgtcttggatggac
gagctgcagaagtgggcgccgacgcttcgagtcgttcgtttgcattccggggatgaaaac
gaacgtgctcgcttgcgtaaagaggtcgttccaaacactgagtcgtacgacgtcgcggtc
acgacgtacgagatggcgtgcaacccggctttcaatgttacattgacacaaaaggtgatg
tggcgcacgatgattctggacgagggacatcgagtgaagaatgaagagacggcagctcat
caggtactgaagcgcgtaaagcgtcaacacacgcttcttcttaccggtacgcccattcag
aacaacttgcacgaattgtacgccattctttccttccttcatccggacatcttcacttcg
agtgagccgttcgacagggcgttcaacttgaacacctccgagcacaaggttgattctgat
ctgctagaaaaggcgcacttcttgatgcgtccgttcattttgcgacgcgtcaagggagaa
gtcgaggtatctcttccgccgaagacggagacgaaaattatgtgccctctctctgaggcg
cagaccttctggtatcgtcgtctgctgcttcgcgaggcgaccgctttacagtcactcgaa
aaagcgacaaaaggcgagggtggcgcggacaacttccaaaagctcaactcactgcttatg
cagctccgaaagtgctgcaatcacccgttcttgttctccggtaccgacgtccctgaggat
ggcgttccggttgaagagctcatcgaggcgtctggaaagctcgcggtgctcgatcgcatg
atgcaaaagctcatggaaggtggccatagagtggtgctcttctctcagttcacatctatg
ctcgatatcctgcaagatttcttgacgttgaggggttacagatacgctcgcttggatgga
tcgacaaatcgagtgcagcgatccatcgacattgccgccttcaaccgtccagactcgccg
ttgtttgccttcttactttccacgcgtgccggtggtttgggcgtcaaccttcaaaccgct
gacacgtgcatcttgttcgacagcgattggaaccctcaggtggatcttcaagcgatggca
cgggtgcatcgtattggacagaaaaaggaagtgcacatctaccgactcgtcaccgctggt
accgttgaggagcgcatgacgcagcgcgcggagaagaagctgttcttagagcagatggtt
tctcgtggctccaccaaagctgcaactgaatccgacagtctcgacagaaatgatctgtat
gcaatgttgcgctttggcgtcgatgcggtcttcagtaaatcaagcggcgatccgccgaca
gatgaagagttggacattctcatggatcgctcttcgaagggcgcggatcggcgcgcgaag
ctcaccaacctccaggctgacgtgacgactgccgaagactacatcgaaggtaaggctgag
gctgcgccaatctcaacgtttatgcttccaaccgcgatcgcaagtgccctgggtgtgagc
gaagatgcggtgagcgaggctaagtcgaaacagtacaagtccgtcaaggatatcgccgat
gagttcaactccaatattctgctcggtaagcgttctcgaacgaagacaacgatggaaatc
gatggccacactgtgttgaaggtgaacaattacagcatggaggatggtgagccgtccgta
cacgagcgcgaggcgcgaaacatggagggaaaatcgaaaccggaatcaaagaaaccgcgc
tctcaaatcgctggcagagactacggccacagctcggtgtgccaatcgtgctgggacggc
ggcgagatcgtgtgttgtgatttgtgcccggtctccgtccacccggattgcatcggcatc
acaatgaaggatatcacgcgctaccatagatggtcatgtccgcaccactcgtgccacgag
tgtgggcgcaaggctgcagcggtgggtggtatcttgttccgttgcgaggcgtgcccgcgg
gcgttctgcgaggatcacttgccagggaccgcggagatcatcggtcagtgcaagcgtttc
caagatttgggccagaaccaccctgcgcaagcgtgcttcatccactgcgacgccgagtgt
gcgaaatgggccgcgtctcacatcgctgaagagtacggtaaaactgctgaaggttggacc
atcggtaagaaggttgcgataaccgatcactggatcgaggatcgcgacgcggaactcgag
cttccggtggagaatggaacgcgaacgaaaccgctggcacatgcgaccttcactgatctc
gtccagttcttacttcgaaacgagggtccgaagaagggaggaaagaagaagaaagtgaaa
aaagcgggcgtcgaagacgtcatcgatccgcagccgggagatttgttggagatgcgtggc
gtgttgtgctattacaccaggcaaggcgagaacgtcgctcacgtctcagaaatgcacaac
gtggattggcgagacatcatcacgtggaacacagactgggtgcccgggtctttctatgga
aaaggaacgtacctcttggaggggactcgtctttggctcgctccgccgccgcgtaagacg
cttgacgagctctcagaggaggaacgcatcaagcgcgtgcaagaggagcgtgaagccgcc
atggtcgccgctgcgatgggtttacccggtgcttctcagatgttgaacgaaggcgaagtg
accgtccttggtcgaggtctaaagggtctgcgtcagaaagatctcttgccttcggagcgt
gatgaaatcgtgactgagatgttcaagcgagtgcgcccactcttggagaaaaagatcatc
gcagagcaaagagaacgggaagaagaagtcaagcgcgccgccaaggatgcggagaaagat
aaattcaaatcggctgaacgcaacgctcgtaccgcgcgacgcggtgacggtttgccctcg
gattctttcctcgccgctgatctcaccacgggcgatcgcataccatcaaggcgcggcgcg
ccaccgccgattccagctgttcatggtggtcaaatcacgaaagacactctcacagcgatc
aaggatgccattcttcgaagcctacacatggcaaacgcgacgaagaacggtgactattgc
cctgcgatgatgctcatggtacgtctctcgcgcggtcacgctgggactccgttgctgaat
aacatgcggatgcgttggacctccaccgcgggtgaagacatgggattcatcttaggcctg
atcgcccttgaacgtgatggctcgcttgagatggaacttcatcacaagtacccggagaac
attgaactcgcggcgcttcgattgtcagccaaggccaaggtaccggccaaaccaaagggc
gaactctcgcaagaggccccgaagcagtcccgcgcgacggcttcgcaatttgtgctgagc
gacgtcgaggtgagagtgcagtgtggagatctcgatggtatcctccgtccaggtgccaag
cgtggggacgaaagcgttgagtacgttgattccaaggggaacacgagcttggtgccggcg
gtagagtttgagcgtttgggaggtcggggctcgacgcgcaagtggcgccagtccatccgt
ctcgccgttgagggtgtttcagcggctcagatcacggacgatagcactcgaggtgttccg
attggcaaatacctgcgcgacgaaggcgcggcgtatcgcgagagtgttatcggacgcgtc
ttggaagtttggtccaccgaggtcgagcagtactctcctggcatggtgatcgattacaaa
gccgactccggtgagcacgaaatcctttatcacgatggaaaccgcgagtggatttacttt
tgcatgacgcaaacgcgatggccagacggtttgcccgctcgtctcgaactgacggaaaag
caaggaaagaaaccgagcgaaaaaccagagaaggagccgaagcgcgggcgtcaagcgacg
agcgtttcggccgaagccatcatcgacggctatcgtgtctacgttcttggcgaaaagtcg
accattgaacaagtgtccgctgaaacgggcgtcgcggaggatgatctcgtcgagttcaac
gctccgtacttttcaaagctcagtgccacgaccaagttacctgaggaaacgaaggtgtac
ctgcaacacggcccggatcccgaggagctcgaggctagtaagctcgtcgagtcggcgtta
gaagagtcaaagaacgcagagattgagtcgagggcgaaagaggcggccaagatggcggcc
aaggaagccaaggaactcgagaaggccaaggcgaaagaaagggcggccaaggagaaggcg
aaagccaaggaaaaggctgccaaggccaaggccaaggccaaggccaaggccaaggccaag
gagaaggcgaagaaagccgccgcgtcgaagaagggcaagtcggccaagaaaggctccgcg
tcgaagaagggtaagaagcaagaagatgcggacgatgaagacttccaggatgatgattac
gagtccgaagaagaggaggaagatgacgacgagtacaattccgacgaagacttcgacgag
gaagacgacgatgaagagttcaccatgaagaaatcgtctaaacgctccaagtacaccgaa
gaagaattgctcgccatggcggtggccgagttccaacttgaactcgaagcgcagtgcgtt
gttcgcgggagcgccattccgatagagtgcggtggactcaccgccgtgcttaccggtggt
aacctgacggttctttactcggactcgaagaagaaatcggcgctcactgatatggatctc
ggggcgttcatgaagctcgccaagcaaaacggccactggcaagaggaggtgaaatacaac
ggcgcgggcgagatgaagggcgaaccgatcattcactacctcgccatgcgcggcctcgcc
atcggacgatccgtcatcggcagcaacgtggatatcctcccgaaaccggaggacatgcag
ttcatgcctgcgaagatcatcagcttcgacgaagccacaggttcgcacgaagtgagatac
tttggtaagggcgaagatgagttggaacagatttatcttcctcttgcgacgatccgctgg
ttaccgaagttgtgggagccgtattccgccccggaagccgtcaaggtgccagacgcagag
ggcggaatcgtcttcgcactgagaccgatccctgtcgggtgcggcggtatgcgcggtatc
ttgcttccgggtggtaagcgcggcgaagagatggtgcgatactgtctcatgcgtcgtgag
agagaacgatgcgtcgttgacgagctcactatcccggcgaccgagtttgaacgcttgagt
ggtaagggcacggcaaagaaatggcgccaatcggtccgcattctagaacccgactacaaa
ctcggtgacaccgttagcaaactactcaaggcggtcggcgaagtcttgggagcgaacgtg
gtcgggcgcgaggtcgaggttttctggccaggcgatgagtgcttctattacggcaccgtc
gatggtttcaggccggaatccggcgagcatgaggttgtttacgatgatggaaacaaggaa
atcttacagattgccatgcaaaccgtgcgatgggggccgacggcgacggtgcgaaaggga
tcgtccacgtcgcgcgtgacgtcgaaaccaaaggaaaagccgaagacatcctggattcag
tgcgatgcctgccaaaagtggcgcattgtcccacaaagttacatggacacgcttggcgac
gacgatgcgtggaagtgccagatgaatccggactcggcgaagagcgctcgcggttgcgac
gctccagaggacaacgaagattag

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