KEGG   Ostreococcus tauri: OT_ostta13g00270
Entry
OT_ostta13g00270  CDS       T01358                                 
Name
(RefSeq) Zinc finger, ZZ-type
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ota  Ostreococcus tauri
Pathway
ota03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    OT_ostta13g00270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ota03021]
    OT_ostta13g00270
   03036 Chromosome and associated proteins [BR:ota03036]
    OT_ostta13g00270
Transcription machinery [BR:ota03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     OT_ostta13g00270
Chromosome and associated proteins [BR:ota03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    OT_ostta13g00270
   PBAF complex
    OT_ostta13g00270
   GBAF(ncBAF) complex
    OT_ostta13g00270
SSDB
Motif
Pfam: SWIRM SWIRM-assoc_1 ZZ SWIRM-assoc_2 Myb_DNA-binding Myb_DNA-bind_6 SWIRM-assoc_3
Other DBs
NCBI-GeneID: 9835685
NCBI-ProteinID: XP_022840155
OrcAE: OT_ostta13g00270
UniProt: A0A090M6Y4
LinkDB
Position
13:43751..46657
AA seq 893 aa
MSSTVKKRASRGCRPRLRDFESREYVDAMSTILRRLRRKHASLAPSFDARALAGATFRLI
TAEEKFLGANAEREGESPRVPKIPHWAWRDVTPGGGLSTLLDVYVSRRRDGKLRAEAQGE
DARREFEAFVREAREALVERRHLKYVKIYVSDDAQGAKELKALAREMRATLAANADGSMW
RITETSTSATSGGKTEHRVHYWFYPDSYEQWYAESSLSGRGRAPWSPQTSTFARKGFDKP
FNVRARWLRDSHKFNEWMNELDYEFDITPEAALGGRHAWEAHDASLTSGKRARADVGADT
EGEMFAADGDEILSYFVTRRRVIQPHPMIAACVSQDDGALVLRDEQEDVTKTYMTAKNVR
LVNMTAGKLPPNATPLFEREERDGAKPLEELRIPTHSAWFRWDVAHEIERRALPEFFNED
NGTGDGLDRYISCRNAMIQCFMKKGRNVTMREVAPKGKSALVDAAAAARIFLFLEDWGLV
NWSFAVDRGVFKVKDDPPTGCPRIIQASDGTLEVKEMDLPEALKMELFDFAKVRATTVSG
EHPLVSPTAIAASTDAQFERRSLDELFATLQAMREVEVRFECNACGTDLIGGVFYHYTVS
GAYDLCESCFPRGAYPEGHTSGDYVKAVYPDFAANARSSASADDTEWSPQEVSSLLEAVS
QSESSVNWNDVAASVGSKNEDECIKYFVRMPTEDAAIAAIDAQLRAPNGVVVDAAAGATL
PDSEDAPFATAPNPVIAQLEFLVSMVSPRVAAASAKAALTELVKHGDRVHDIDAVKKANA
RGLVAAAVQAKILAMDEEHEIRRIVSGILDVLAKKLELKLKYLDLMDVHAERALEAFSSQ
SKTALADRRSAIAETRDYSERIVEMTAKLHSLRQRLAVEEAKIAPAAAPRVDV
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgtcgtcgacggtgaagaaacgggcgagtcgagggtgcagaccgagactgagagatttc
gagagtcgagagtacgtggacgcgatgtcgacgatattgcgacggttacgaaggaaacac
gcgtcgttagcgccgtcgtttgacgccagggcgttggcgggggcgacgtttcgtttgatt
acggcggaggagaagtttttaggagcgaacgcggagcgcgaaggcgagtcgccgcgggtg
ccgaagattccgcattgggcgtggagagacgtgaccccgggtggggggttgtcgacgtta
ttagatgtttacgtgagtcggcgacgagatgggaagctcagggcggaagcgcagggtgag
gacgcgcgaagagagttcgaggcgttcgtcagagaagccagagaggcgctcgtggaacgg
cgacaccttaagtacgtgaagatttacgtctcggacgacgcacagggtgcgaaagagttg
aaggcgttagcgcgggagatgcgagcgacgctcgcggcgaacgcggacgggtcgatgtgg
agaatcacagagacgtccacgagcgcgacttctggggggaagacggaacatcgcgtgcac
tattggttctatccggactcgtacgagcagtggtacgcggagagctcgctttcgggtcga
ggacgggcgccgtggtcgccgcagacgagcacgtttgcgcgcaaagggttcgacaaaccg
ttcaacgtccgagcgcgttggcttcgggatagtcataagtttaacgagtggatgaacgag
ctcgattatgagttcgacatcacccctgaggcggcgctcggtgggagacatgcatgggaa
gcgcacgacgcgtcgttgacgagcggtaaacgcgcgcgcgcggacgttggcgccgatacc
gagggcgagatgttcgccgctgacggtgacgaaatcttatcatacttcgtgacgcgtcgt
cgagtcattcaaccgcatcccatgatagccgcgtgcgtgagccaggacgacggcgcgctc
gtcttgcgtgacgagcaggaggacgtcaccaagacgtacatgacggccaagaacgtacgt
cttgtgaacatgaccgccgggaagcttccaccgaacgcgacgccattgtttgagcgcgag
gaacgagacggcgcgaagcctttggaagaactcaggattcctacacatagtgcgtggttc
agatgggacgtcgcgcacgaaatcgagcgccgagcgctgccggaattcttcaacgaagac
aatggcacgggagatggattagatcgatacatttcgtgtagaaatgcgatgattcaatgt
tttatgaaaaagggacgaaacgtgacgatgcgtgaagtcgcgccgaagggcaagtcagcg
ctggtcgacgccgcagccgcggcgaggatatttttatttctagaggattggggactggtg
aactggagcttcgccgtcgatcgaggcgtattcaaggtgaaggacgaccctccgaccgga
tgtccccgaatcatccaagcgagcgacggcacacttgaggtgaaggagatggacctgcct
gaggcgctgaagatggagctttttgatttcgcgaaggttcgagcgacgacggtgtctggc
gaacatcccctcgtttcaccgaccgcgatcgcggcgtcgacggatgcgcagtttgagcga
cgttctttggacgaattattcgccacattgcaggcaatgcgcgaggtggaggtgcggttt
gagtgcaacgcgtgcggaactgatttgataggaggcgtcttctatcactacacagtctcg
ggcgcttacgacctatgcgagtcttgtttcccgcgaggcgcgtaccccgagggtcatacg
agtggtgattacgtcaaggcggtctacccagatttcgccgcaaacgcccgttcgagcgct
agcgcggacgacacagagtggtctccgcaggaggtgtcttctctcctcgaggctgtctct
cagagcgaatcgagcgtgaactggaacgacgtcgccgcgagcgtcggttcgaagaacgag
gacgagtgcatcaaatatttcgtgcgcatgcccacggaagacgctgcgatcgctgcgatt
gacgcgcaactgcgcgcgccgaatggcgtcgtcgtggacgccgccgccggcgcgacactt
cccgattcggaagacgcgccgttcgcgaccgcgccgaacccagtgatagcgcagctcgag
ttcctagttagcatggtttctcctcgagtcgccgcagcctcggccaaggctgcgctcacg
gagctcgtgaagcacggcgatcgagtccacgacatcgacgcggtgaaaaaggccaacgcg
cgaggcttggtcgcggccgcggtgcaggcgaagattctcgccatggacgaagagcacgag
attagacgtatcgtttccggtatcctggacgtcttggcgaagaaactcgagctcaagctc
aagtacctcgacctcatggacgtgcacgccgagcgcgcgctcgaagcgttttcgtctcag
tccaaaaccgcgctcgccgatcgaagatccgcgatcgcggagacgcgcgattacagcgag
cgtatcgtagaaatgaccgccaaactccactcgcttcgccagcgcctggctgtggaggag
gcgaaaattgcgcccgccgccgcgccccgcgtagacgtgtaa

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