Ostreococcus tauri: OT_ostta13g00540
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Entry
OT_ostta13g00540 CDS
T01358
Name
(RefSeq) TATA box binding protein associated factor (TAF)
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ota
Ostreococcus tauri
Pathway
ota03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OT_ostta13g00540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta13g00540
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta13g00540
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
OT_ostta13g00540
Coactivators
SAGA/TFTC/STAGA complex
OT_ostta13g00540
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
OT_ostta13g00540
STAGA complex
OT_ostta13g00540
TFTC complex
OT_ostta13g00540
SAGA complex
OT_ostta13g00540
SLIK complex
OT_ostta13g00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
DUF5739
TFIID-31kDa
MGS_GT
Motif
Other DBs
NCBI-GeneID:
9836307
NCBI-ProteinID:
XP_022840165
OrcAE:
OT_ostta13g00540
UniProt:
A0A090M701
LinkDB
All DBs
Position
13:complement(93477..95306)
Genome browser
AA seq
560 aa
AA seq
DB search
MGQHSKKFPRTPHSATRVMAPASTYAPASVVAVADTIGAPRPSDEAAKALASDVEYRLRT
IIQDAIKIMRHCKRETLRAEDVNAALKLRNCEPLYGFGTGTSSVQYKRTKEDPEVFYLDE
REIDVRELITKRLPRPPVDVNLVPHWLAVEGVQPMIPENPMPLAPEPKPLQPPLGSKRPR
ARAEGGGDPDAGGLQPVVSHVLTKELQYYFDKVTALVRGAGRAEASDRDVDLLARALRSL
GEDVGLHNLMPYFTQFITEETTASLRDLPRLRVLIQMIRALISNPDINVELYLHQLMPSV
VTCVVAKRLCQNLDEDHWSLRDDAANTVAFVCAKFGAAYPSIQPRITRTLLRALLDTKPL
TTHYGAVRGLQALGPKVVRETIMPNLRAYMTNTLEPALEAPKPLDDSELKNASEEDRNIA
VAKAKLAVLRHTDAQRVMGALQEAVGACLRDEIGDAENAAREKRLADQLMRWHRIDGAGR
FEKDETATGKDAPAKKTPVSPNSPSRQGRGATAKGAKSAVVPKAAPLVRGRRTRGTTPDD
DIGDAAAAHAPNVAVAETHV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagcactcaaaaaaattccctcgcacaccgcacagcgcgacgcgcgtcatggca
cccgcgtcgacgtacgcgccggcgtccgtcgtcgccgtcgcggacaccatcggtgccccg
cgaccgagcgacgaggcggcgaaagcgctcgcgagcgacgtggagtaccgcttgcggacg
atcattcaggatgcgatcaaaatcatgagacactgtaaacgggaaacgctccgtgccgag
gatgtaaacgcggcgttaaagttgcgaaactgtgaaccgctctacggattcggcaccggg
acgtcgagcgtgcagtataagcgcacgaaggaggacccggaggttttttatctggatgag
cgggagattgatgtcagagagttgatcacgaagcgcttgccgcgaccgccggtggacgtg
aacctggttccgcactggttggcggtggagggggtgcagccgatgattccggaaaatccc
atgcccctggcgccggaaccgaaaccgttgcagccgccgcttgggtcgaagcggccgcgc
gcgcgggcggagggtggaggggatccggacgcaggggggttgcagccggtggtgtcgcac
gtgctgacaaaggagttgcagtattacttcgacaaggtcaccgcgctggttcgaggggcg
ggacgcgcggaggcgagcgatcgcgacgtcgatttactcgctcgtgcactgcgatcgctc
ggcgaagacgtcggtttgcacaatttgatgccgtacttcactcagtttatcacagaggag
accacggcgagtctgagggacttgccacgactcagggtgttgattcagatgattcgcgcg
ttgatctcaaatcctgacatcaatgtcgagctgtacttgcatcaactgatgccgagcgtg
gtgacctgcgtcgtggcgaagcggctgtgtcaaaatttggacgaagatcactggtcgctt
cgcgacgacgcggcaaacactgtggcctttgtgtgcgccaagtttggcgctgcgtacccg
agtattcaacccaggatcacgcgcacgctcttgcgcgcactcttagacaccaaaccgctc
acgacgcactacggtgccgtgcgcggtttacaagcgctcgggcccaaggttgtgcgagaa
accatcatgcccaacttgcgcgcgtacatgacgaacacgctcgagcccgcgcttgaggcg
ccgaagccgctggacgatagcgagctcaaaaacgcaagcgaggaggatagaaatattgct
gtcgcaaaggcgaaactcgcggtacttcgccataccgacgcgcagcgtgtcatgggcgct
ctgcaagaagccgtcggcgcgtgcctgcgagatgaaatcggcgatgccgaaaacgctgcg
agagagaagcgactcgcggaccaactcatgcgctggcaccgaatcgacggcgccggacgc
ttcgaaaaggacgagaccgcgacagggaaagacgcgcctgcgaagaagacgccggtgagt
ccgaactcgccgtcccgccaaggtcgcggcgccacagcgaagggcgcgaaatccgctgtc
gtccccaaagccgccccgctcgttcgcggtcgtcgcacccgcgggacgacaccggacgac
gatattggcgacgccgccgccgcacacgcccccaacgtcgccgttgcggagacccacgtc
tag
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