Ostreococcus tauri: OT_ostta13g01640
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Entry
OT_ostta13g01640 CDS
T01358
Name
(RefSeq) WD40 repeat
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ota04121
]
OT_ostta13g01640
Ubiquitin system [BR:
ota04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
OT_ostta13g01640
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
CDC45
PQQ_2
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
9835731
NCBI-ProteinID:
XP_003082640
OrcAE:
OT_ostta13g01640
UniProt:
A0A096P7X9
A0A1Y5I9Y0
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Position
13:complement(281050..282795)
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AA seq
581 aa
AA seq
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MDGTGARAAAAAADETRADARGKGENAECAVGSLGKSPPMARNIFADLQRRQWCRERQSP
ERRGHAQSAHAGATALRCGNKRFVEELRLTETLERHGGCVNCVSWNDDASLLISGSDDMT
VCVWSCGAKMPLKGSAFTGHVHNIFAAKFVPQSGDGSCVTTSADGDVRLTDLERGFRGPP
PQHYGYRLRGANQPAAECSRSLWAGRGAGMGMGITFVPNEPNTFLCAHQDGRIRLFDLRQ
SHGGLGGTSHEIIADLSSHGPTSEIVFDPTSPTTFATCSDDPYVRIFDLRHVNNNRREAA
REFPTPPSPSTSPTGEPAFSRSARLSLKHDIPCVMLVTPLELSRGVRFGSPMGFEGISGL
AYSSKGELAISCKGDDVYVLDTRKAAASANSHFPREDLESRSFPLATSYSVPVVTTPAKR
YVGRKNVKTFLKGVAFMCDDEYVTTGGDDGNVYVWHKDSGELVRKFQADSSVVNTVLPHP
HLPTMVCCGIDNHVRVFEAGDGGVHLGTPPKRDDNDAWFDEEDEEEDDEDDQDDDSDEEE
EDSEEDTDDAILARWATRVIAQSNEDLPDDEDDEDFEPMQA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatggaacgggtgcacgcgcggcggcggcggcggcggatgagacgcgcgcggacgcg
cggggaaagggagagaacgcggagtgtgcggtcggctcgctcgggaagagtccgccgatg
gcgaggaatatattcgcggatttgcagcgtagacagtggtgccgggaacgacagtcgccg
gagcgtcgagggcacgcgcagagcgcgcacgcgggggcgacggcgcttcggtgcgggaat
aagcgcttcgtggaggaacttcggttgacagagacgctggagcgacacggtggatgcgtg
aactgcgtgagctggaatgatgatgcttccttgttgatctcggggagcgatgacatgacg
gtgtgcgtttggagctgcggggcgaagatgcctctgaaggggtcggcgttcacgggacac
gtgcacaacatatttgccgcaaaatttgtgccgcagtccggcgatgggtcgtgtgtgacg
acatccgcggacggagacgtgcgtctcacagatttagagcgcgggtttcgaggaccgcct
ccgcagcactacgggtatcgcttgcgaggggcgaatcaaccggcggctgagtgcagtcgc
tcgctgtgggccggaaggggagcgggcatggggatgggaatcacctttgtcccgaacgag
ccgaacacgttcctatgcgcgcatcaggacggacgaatccgtttgttcgatcttcgacaa
agtcacggcggtctcggcgggacatcgcacgagatcatcgccgacctgagctcgcacggg
ccaacgtctgaaatcgtcttcgatccaacgtcgccgacgacgtttgcgacgtgttccgat
gacccttacgtgcgcatctttgacctgagacacgtcaacaataatcgaagagaggcggca
agggagtttcccacgcctccgagtcctagcacgtcccctacaggggagccggcgttctca
cgctcggctcgtttgtcgttgaaacatgacattccgtgcgtcatgttggtgactccgcta
gagctgagccgcggcgttcgcttcggctcgccgatgggatttgaaggcatctcagggttg
gcgtattcatcgaagggtgagcttgcgattagctgtaagggtgacgacgtgtacgtcctg
gacactcgaaaggcggcggcgagcgccaactctcactttccgcgggaggacttggagtcc
cgttctttcccgttggcgacatcgtattctgtcccagtcgtcaccacgccggcaaaacgc
tacgtcgggcgcaagaatgtgaagacgtttttgaagggcgtcgcgttcatgtgcgacgat
gagtacgtcaccactggcggcgacgacggaaatgtgtacgtctggcacaaggactccggt
gagctcgtacgtaagtttcaagcggacagctcggtcgtgaacaccgtcttgccgcatccg
catttacccacaatggtttgctgtggcatagataaccacgtccgcgtctttgaagcgggt
gatggtggcgttcatctgggtacgcccccaaagcgcgatgacaacgatgcctggttcgat
gaagaagacgaggaggaagacgacgaagacgaccaagatgacgactcggatgaggaagaa
gaagactcagaggaagatacagacgacgcaattctcgcgcgttgggcgacgcgagttatc
gctcagtctaacgaagaccttccagatgacgaagacgacgaagactttgagcccatgcag
gcttga
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