Ostreococcus tauri: OT_ostta13g02370
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Entry
OT_ostta13g02370 CDS
T01358
Name
(RefSeq) WD40 repeat
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ota
Ostreococcus tauri
Pathway
ota04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
OT_ostta13g02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ota04121
]
OT_ostta13g02370
Ubiquitin system [BR:
ota04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
OT_ostta13g02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EML
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
9837516
NCBI-ProteinID:
XP_022840235
OrcAE:
OT_ostta13g02370
UniProt:
A0A096P885
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Position
13:complement(<405965..>407572)
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AA seq
535 aa
AA seq
DB search
MSTVETWTRAREVDGDARARGSAATPLDRYVPSRRASAGFRAREWVMLDAAATNDAVDRG
SRDGRRRGRGVGEDEDAPVGTEEGGSGGRGAGETTGGRGCEREDTSAAYGALLRSELFGD
VSPPEAYGVTPPPTPSSARFRPRTPSSARGSEGSSGYSYGSPGRNLFRFRDDGSYGVATD
RGESPYALSPVGHAPLGMTLASPRRRAPRKIARSPFKVLDAPALQDDFYLNLVDWSSSNV
LAVGLGTCVYLWSACTSKVTKLCELAPNDSVCSVAWTQRGTYLGVGTNSGEVQIWDVAKC
KKTRSMLGHRSRAGTLAWNSHTLSSGSRDRAILNRDIRSPSDYSNKLLGHKSEVCGLKWS
YDDQQLASGGNDNQLFVWNSHSSSPTLRCSEHTAAVKAIAWSPHQHGLLASGGGTADRCI
RFWNTVTNTPLQCIDTGSQVCNLVWSKNVNEIVSTHGYSQNQIVVWRYPSMSKLTTLTGH
TLRVLFLAISPDGQTIVTGAGDETLRFWNVFPGVKSQVSGAGDNTVCALARTSIR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggtggagacgtggacgcgcgcgcgcgaggtcgacggcgacgcgcgcgcgcgc
gggtccgcggcgacgccgttggatcgatacgtgccgtcgcggcgcgcgtcggcggggttc
cgggcgcgcgaatgggtcatgctcgacgccgcggcgacgaacgacgccgtcgatcgaggg
agtagggatgggcgcaggcgtggacgaggggtgggggaggatgaggacgcgccggtgggg
acggaggagggcgggagtggggggcggggggcgggggagacgacgggcggacgtggatgc
gagcgcgaggacacgagcgcggcgtacggggcgctgttgcggagcgagttgttcggtgac
gtgtctccgccggaggcgtacggggtgacgccgccgccgacgccgagctcggccaggttc
agaccgcgaacgccgtcctcggcgagggggagcgaagggagttcggggtactcgtacggg
agtccggggagaaatttgttccgatttcgcgacgacggttcgtacggagtcgcgaccgat
cgcggagagtcgccgtacgcgctcagtccggtgggacacgcgccgctcggaatgacgctc
gcgtctccgcgccggcgcgcgccgagaaaaatcgcgagaagcccattcaaggttctcgac
gcgcccgccttgcaggatgacttttacctcaatttggtggactggagctccagtaacgtc
ctcgccgtgggtttgggaacgtgcgtgtacctgtggagcgcgtgcacgagcaaggtgacc
aaactgtgcgagctcgccccgaacgactcggtgtgctcggtggcgtggacgcaacgcgga
acgtatctgggcgtcggcacgaacagcggagaggtgcaaatatgggacgtcgctaagtgt
aagaagacgcgctcgatgctcgggcaccgatcgcgcgcggggacgttggcgtggaactcg
cacacgctctcgagcggaagtcgcgaccgagccatcttgaatcgagacattcgatcgccg
agtgattactcaaacaagctactcgggcataagagcgaggtgtgcggcctgaaatggtcg
tacgatgaccaacagctcgcgagcggtgggaacgacaaccaactctttgtgtggaattcg
cactcgtcgtcgccaaccttgcgatgcagcgagcacaccgccgcggtgaaggccatcgcg
tggtctccgcaccagcacggactcctcgcgagtggaggagggaccgccgatcgatgcatt
cgtttctggaacacggtgacgaacacaccgctgcagtgcatcgacactggctcacaggtg
tgcaacttggtgtggagcaaaaatgtcaacgagatcgtgagcacgcacggatacagccag
aaccagatcgtcgtctggagatatcccagcatgtccaagctcacgacgctcaccggtcac
accctgcgcgtgctcttcctcgccatctctccggacgggcagaccatcgtcaccggcgcc
ggcgacgagacgttacgcttctggaacgtcttcccgggcgtcaagtcccaggtctccggc
gccggtgataacaccgtctgcgcgctcgctcgcacgagcatccgatga
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