Ostreococcus tauri: OT_ostta14g00320
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Entry
OT_ostta14g00320 CDS
T01358
Name
(RefSeq) Plus-3
KO
K15178
RNA polymerase-associated protein RTF1
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta14g00320
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
OT_ostta14g00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
DUF7615
CCDC138_cc
Polysacc_deac_2
Motif
Other DBs
NCBI-GeneID:
9837829
NCBI-ProteinID:
XP_003082833
OrcAE:
OT_ostta14g00320
UniProt:
A0A096PBK6
LinkDB
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Position
14:64479..66176
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AA seq
565 aa
AA seq
DB search
MANGDDEDVDDVDVVAYDPNDPHGDGLDDDLMGDEDDRARLRAMTELERETMMLERSERR
RAIESRRRIMEMAARSKRSVSDQRTGARTALEKLAEERSRRERKRRVFGDDSEEDDAEAA
AEYYSDDDARVGDGKMVTKKPKRGGASEVVVDEDDDFDSSTKNQPATKAEIESITIRRHQ
LESWISEPFFESAVVGCLTRVGIGLNKHGENVYRLVEISGVAEGKYKQYSLKPYAYVKDK
PPTNVWLVLKWGQSEKTFRISEISNSATQDNEWSQWVAHCRDAGCKPITSEDVQKALENL
REAQNYRYTTDDVTKILAQKRERLGGVRHNLLFEKEQIRTAIAHAEAEDDFAKAEELRGR
LEEIDREVKARLEQRSGSTQDALANINRKNEIQNSEKLSKRASEQVARLKKGLANTGEGD
PFSRRPTRLTTYWDMGVKEDGAEGTTKGDEKEQQAAAAASTATNAEDDEDHDDIFLTAGQ
SAGAAEKELCDVLQQAHRETSLAIDLRRLDAPSEADTFREKSTRGILRRGAALLKSSYDA
ARAAKLAATPTSRAFTVQEYLAEFA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggcgacgacgaggacgtggacgacgtcgacgtcgtcgcgtacgacccgaat
gacccgcacggcgacggcctggatgatgatttaatgggtgacgaagacgatcgcgcgcga
ttacgcgcgatgacggagctcgagcgagagacgatgatgttggagcgctcggagcgacgc
cgggcgatcgaatcgcgacgacggatcatggagatggcggcgcgatcgaagcgatcggtg
agcgaccaacgcacgggggcgcgcacggcgttggaaaaactggcggaggaacgatcgcgg
agggaacgcaagcgacgcgtcttcggcgacgactcggaggaggacgacgcggaggcggcg
gcggagtattattccgacgacgacgcgcgcgtgggggacgggaagatggtgacgaagaaa
ccgaagcgggggggggcgtcggaggtggtggtggatgaagatgacgatttcgattcgtcg
acgaagaatcaacccgcgaccaaggcggagattgaatcgatcacgattcgtcggcatcaa
ctcgagtcttggatctccgagccgttttttgaatccgccgtcgtcggatgcttgacccga
gtcgggattggattgaacaaacacggtgaaaacgtctatcgcctcgtcgagatcagcggc
gtcgccgagggtaagtacaagcaatattccttaaagccgtacgcgtacgtcaaggacaag
ccgccgacgaacgtgtggctcgtcttgaagtggggccagagcgagaagacgtttagaatc
tccgagatttcaaactcggcgacgcaagacaacgagtggtcgcagtgggtggcgcactgt
cgcgacgccgggtgtaaacccattacgagcgaggacgttcaaaaggcgctcgaaaacttg
agggaggcgcaaaactacagatacaccacggacgacgtgacgaaaatcttggctcaaaag
cgtgagagactcggtggggttcgacacaatctgttgtttgagaaggaacagattcgaacc
gcgatcgcgcacgccgaggcggaggacgatttcgcaaaggcggaggaactcagaggacga
ctggaggagatcgatcgcgaggtcaaagcgaggctcgaacagcgatcgggatcgacgcaa
gacgctctggcgaacatcaatcgtaagaatgagattcaaaactcggaaaagttgtccaag
cgtgcgtccgaacaagtcgcgcgcttgaagaagggattggccaacacgggcgagggcgat
cccttctctcgccgaccgacgcgtctgacgacgtactgggacatgggcgtgaaggaggac
ggcgctgaggggacgacgaaaggagatgaaaaagaacaacaagcggcggcggcggcttcg
acggcgacgaacgccgaagatgacgaagatcacgacgatattttcctcaccgccggccaa
tccgccggagcggcggagaaggagctttgcgacgtccttcaacaggcgcaccgcgagacg
tcgctcgcgatcgatcttcgtcgactcgacgcaccgagcgaagcggatacgttccgagaa
aagtccacgcgaggtatccttcgacgaggcgcagctctgttgaaatcgtcctacgacgcc
gctcgcgccgccaagctcgccgcgacgccgacgtctcgcgccttcaccgtccaggagtac
ctcgccgagttcgcctag
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