Ostreococcus tauri: OT_ostta14g00790
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Entry
OT_ostta14g00790 CDS
T01358
Name
(RefSeq) WD40/YVTN repeat-like-containing domain
KO
K14320
aladin
Organism
ota
Ostreococcus tauri
Pathway
ota03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta14g00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta14g00790
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OT_ostta14g00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
WD40
Beta-prop_EML_2
Ceramidase
Motif
Other DBs
NCBI-GeneID:
9837744
NCBI-ProteinID:
XP_022841301
OrcAE:
OT_ostta14g00790
UniProt:
A0A096PAR6
LinkDB
All DBs
Position
14:134755..136263
Genome browser
AA seq
502 aa
AA seq
DB search
MSLEEIDCEFIARDRRGAAKRVVGDVLECQIALKRACVSKNSTKQHAGEEARDSQKSIIT
RAAALKRALTGFGALSARAIIDATIGADARGASEMRAAMAWHGAREILACADEGGRCVVR
DVERLQSDDTRATQNEDDGSETTTTLRHRAHGRCASMAWRPRSGRTLALGGASGVSVWTR
ERRGTRATSAVASETGALSPIDSAKIRALANSGTSGEKAGHRWRLTIYNERGAHEAGPNA
PPGGACEAERVAWSPDGRLLVACSRRCRVIHCWDASAGTYTPIGAGVAGLSEVAFSACGG
YLLAAHVGEGFAVWKLDDMTCRKWCTNGREVTAVTWGEVNEKQGSAPVALVATRGSAKLS
AVHLSSRDSVSDVSAHVLPIELPEIVTTTGSSGSNECDIADMDWDATSSRLVLALRGGAR
DGCVAVYATRTTKIVSGSLIGYFAVIGDDAGDRIAANAVKISAPRRVGSDRVRSTLAVVV
DSGDVALVPLTYAVPHTMRTAL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgaggagatcgactgcgagttcatcgcccgcgatcgtcgcggggccgcgaaa
cgcgtcgtgggtgacgtgttggagtgtcagatcgcgctcaagcgcgcgtgcgtgtccaag
aatagcacgaaacaacatgcaggggaagaagcgcgtgactctcagaaatctatcatcacc
cgcgctgccgctctgaaacgcgcgctcaccgggttcggcgccctgagcgcgcgcgcaatc
atcgacgccacgatcggcgccgacgcacggggcgcgagcgagatgcgagcggcgatggcc
tggcacggcgcgcgggagattttggcgtgcgcggacgaaggcggtcggtgcgtcgtccgg
gacgtcgagaggcttcaatcggacgatacgcgagcgacgcagaacgaggacgatgggtcg
gagacgacgacgacgttgagacatcgcgcgcatggacgatgcgcgtcgatggcgtggcgg
ccgcgctcggggcggacgctggcgctcggcggcgcgagcggggtgtcggtgtggacgcgc
gagagacgagggacgagagcgacgagcgcggtggcgagcgaaacaggggcgttgagtccg
atagatagcgcgaagattcgggcgctggcaaacagcgggacgagcggtgagaaggcggga
caccggtggcggttgacgatatataacgagcgcggcgcgcacgaagccggaccgaacgcc
ccgcccgggggcgcgtgcgaggccgagcgcgtggcgtggagcccagatgggagacttctt
gtcgcgtgctcgcggcgatgtcgggtgattcactgttgggacgcgagcgctgggacgtac
acgcctatcggcgcgggtgtcgccgggttgtccgaagtcgcctttagcgcgtgcggcggc
tatctcctcgccgcgcacgtcggcgaggggttcgccgtgtggaagttagatgacatgacg
tgtaggaaatggtgtacgaacggtcgcgaggtcaccgcggtaacgtggggcgaggtgaat
gagaagcaagggagcgctcccgtcgcgctcgtcgccacgcgcggctccgcgaagctctcc
gccgtgcacttatcctcaagagattccgtgagcgacgtctctgctcacgtgctcccgatc
gagcttccggaaatcgtcaccacgaccggttcttcgggatcgaacgagtgtgacatcgcg
gacatggattgggacgccacgagctcgcgactcgtactcgccctgcgcggcggcgcccga
gacggttgcgtcgccgtctacgcgacacgcacgacgaaaatcgtcagcggaagcctcatt
ggttacttcgccgtgattggtgacgacgcgggtgatcgaatcgccgcgaacgcggttaaa
atctccgccccgcgacgcgtcggctctgaccgcgtgcgaagcacgctcgccgtcgtcgtc
gactccggcgacgtcgctctcgtcccactcacctacgccgtcccgcacactatgcgcacg
gcattgtga
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