Ostreococcus tauri: OT_ostta14g01810
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Entry
OT_ostta14g01810 CDS
T01358
Name
(RefSeq) Helicase, C-terminal
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta14g01810
Enzymes [BR:
ota01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OT_ostta14g01810
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-60S particles
Helicases
OT_ostta14g01810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
DUF7545
Motif
Other DBs
NCBI-GeneID:
9837655
NCBI-ProteinID:
XP_022841349
OrcAE:
OT_ostta14g01810
UniProt:
A0A096PBP1
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Position
14:330798..332726
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AA seq
642 aa
AA seq
DB search
MSREDAIARAEGPPFTDLDPPLLASSLRTLQGMAFTRTTPVQAATIPLLATHKDVLVEAC
TGSGKTLAFVLPMTEILSRSVGGMRRHEIGAVVVSPTRELARQIHAVATPFVEAMLRERG
ESGVEGRATMLLVGGTDVSKDVGAFAAMSPLVLVATPGRLWDVMQRSKELDAKKCELLIL
DEADRLLGMGFMTTLNNIISRLPKQRRTGLFSATQTEEVAELARAGLRNPVRVTVRDALN
AAAKAAGEKTGKLPTQLQLLYRVCPIDAKLWHFVNFLKEHRECKLIVYFLTCACVDFYES
ALKEMLPEANAIALHGKMKQNARESALVKFTELKSGILMCTDIAARGLDIPGVDWIVQFD
PPQDPAAFIHRVGRTARMGREGSAIVFLSPNSEASYVDFLRIRGVDIKAAPGTREYYAEA
AANDGDNQEIELPSDIVDALEQSERDEREGAAHAHAVLRKASESNRDIMEKGVRAYVSYI
RGYKEHHCRFIFRFKELEYGSLGMAMGLLRLPKMKEIRKAPKKFMESFVESSVNADTVAF
SDKGREKQRQKTLKEQEEAAAAQRLLDENKPKVKKEKPVKEEKRLTAFKRRKQESLEDIE
EMEDDYRALKKLKKGKMTEEEFDMEIGFEEEKPKSKTNKKSQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgaggacgcgatcgcccgagcggaaggtccaccgttcaccgacctcgatcca
ccgttgctcgcgtcctctctgcgcacgctccaaggcatggcgttcacgcgaacgacgccc
gtgcaggcggcgacgattcctctgctcgcgacgcacaaagacgtcctcgtcgaggcgtgc
acggggtcggggaagacgctggcgttcgtgttacccatgacggagattctctcgcgatcg
gtgggagggatgcgacggcacgagatcggtgcggtcgtcgtgagcccgacgagagagttg
gcgcggcagatacacgcggtggcgacgccgttcgtggaggcgatgttgcgagagagaggg
gagtcgggggtggaggggcgggcgacgatgctactcgtgggtggcacggacgtgagtaag
gacgtgggggcgttcgcggcgatgtcgccgttggtgttagtggcgacgccgggacggctg
tgggacgtgatgcagcggagcaaggagttggacgcgaagaagtgcgagctgttgatcttg
gacgaggccgatcggttgttggggatgggattcatgacgacattgaataatattatatct
cgattgccgaagcagcgaaggacgggcttgttcagcgcaacgcagacggaggaagtggcg
gagctcgcgcgcgcaggtttgcggaatccagtgagagttacagtgagggacgcgctcaac
gcggcggctaaggcggcgggtgagaagactggaaagctcccaacacagttacaactactc
tatcgcgtatgtccgatagacgccaagctttggcactttgtgaactttctcaaggagcac
cgcgagtgcaagttgattgtctactttttgacgtgcgcgtgtgtggatttttatgaatct
gcgctcaaggagatgttaccggaagcgaacgcgatcgcattgcacggaaaaatgaagcag
aacgcgcgagaatcggcgctggttaagttcacggagctaaagtccggtattttgatgtgc
accgacatcgcggcgcgcggtttggacataccgggcgttgattggatcgtgcagtttgat
ccgccgcaggatcccgcggcattcatccatcgtgtcgggagaaccgcgcgcatgggtcgc
gaaggtagtgctatcgtcttcttatctccaaactctgaggcgagttacgtggatttctta
aggattcgaggcgtggatatcaaggcagctcccgggacccgagagtactacgccgaggca
gcagccaatgacggtgacaatcaagagatcgagttaccgtctgatatcgtggacgctctg
gaacagtctgagcgggacgagcgtgagggcgcggcgcacgcacacgcggtgttgagaaaa
gcgagtgaatcgaatcgagacatcatggaaaagggtgtcagagcgtacgtctcatacatt
cgcgggtacaaggagcatcattgtagattcattttccggttcaaagagctcgagtacggc
tcgctcggaatggccatgggcctgcttcgccttcctaagatgaaggaaattcgtaaggca
cccaagaagttcatggagagcttcgtcgagtcctccgtcaacgccgacacagtagcattt
tccgacaagggacgagagaagcagcgtcaaaagacgctcaaggagcaggaagaggcggcc
gccgcgcaacgattactcgatgaaaacaaacccaaagtgaagaaggagaaaccagtcaag
gaggagaagcggctcaccgcctttaagcgccgcaagcaggagtcactggaagacatcgaa
gagatggaggacgactatcgcgcgctgaaaaagctaaaaaagggtaagatgactgaggaa
gagttcgatatggaaattggattcgaggaggagaaaccaaaatcgaagacgaataaaaag
tcgcaataa
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