Ostreococcus tauri: OT_ostta14g02480
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Entry
OT_ostta14g02480 CDS
T01358
Name
(RefSeq) DNA repair protein Rad4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ota
Ostreococcus tauri
Pathway
ota03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OT_ostta14g02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ota03400
]
OT_ostta14g02480
DNA repair and recombination proteins [BR:
ota03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
OT_ostta14g02480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
BHD_1
Rad4
BHD_2
Motif
Other DBs
NCBI-GeneID:
34946391
NCBI-ProteinID:
XP_022841377
OrcAE:
OT_ostta14g02480
UniProt:
A0A096PBY2
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Position
14:complement(440596..443052)
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AA seq
818 aa
AA seq
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MPRETLKGASTAAVASAIDKRRRKREDEHQSAREENLMETPRDDARALPSGGKTALEIAT
MLNVPLPLAKFGIGGVDDGGSGACGAEAKDDASESEEWDDVCGDDYGSIAYEDEDAGVEN
GDAEGGRGVKWARGSDEAETESSGGPKRKKKKYVRRLSDDERAGVLQTHHIHVMCLLARG
RHVRGAASSRLLQAMTTSCAPSALANAVQGSASGALEVSALARLNDWFADVIAPPISIDD
DDDEKSGLERLTKDAQWRRLAFRLAMRRAGMGSTRGGASAYAAKLARSWTLRGREKISEE
ESAALFASICQGFGVVCRVVSSLEPVPLRASATTLEHMGVLTTPKPPPVVRKETRNTHRF
VRHWCEVLCARHDEKGVDKKATNARWVSVVPTTRGSVDDMGVIFGERKRTTTADATSSMP
YVVAFYGDSGARDVTRKYAAAFSQALHHRTPDWKWWETITTHMDRLHRDAVACDCSPELR
KLIDSADKAELFEMDTRSSKERVPGTMTEIKNHPLWVVERFLSRSQCIHPRHPVKALIAG
EPVFPRSCVKELKSAERWKSECRRRVIDALIDSPVRKIHSRALQARIKQLTRAREGWFLS
KAEGSKERLQSEEWRATMSKDEECPQDPQTILGDIPLYGEWQTEPWTPPSAVGGVVPKND
RGNVDLYGNALPPPGTVHVNLPRVSKTAKLMNIDYAPALVGFEYKAGGKTLPLFNGIVVC
EEFKDELLKRHEDAEEARRITLEAKAYKEACAHWRLLLGAIWTRARLRDEFQDGVTTEEA
DPTARRIAAARAMNERDETTTERDERLVLGAAAFVEEL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgagacgctcaagggcgcgtcgaccgcggcggtggcgtcggcgatcgataaa
cgacggagaaaacgcgaggatgagcatcaatcggcgcgcgaggaaaatctcatggaaacg
ccgcgcgacgacgcccgcgcgctcccttcgggcggtaagacggcgctggagatcgcgacg
atgttgaacgtgcccttgccgctcgccaagttcggtatcggtggcgttgacgatggtggg
agcggcgcgtgcggggcggaggcgaaggacgacgcgagcgagagcgaggagtgggacgac
gtgtgcggcgacgattacggctcgatcgcgtacgaggacgaggacgcgggagtagagaac
ggtgacgcggaggggggacgtggggtgaagtgggcgcgcgggtcggacgaggcggagacg
gagagctcgggcggaccgaaacggaagaagaagaagtacgtgaggagattgagcgatgac
gagcgcgcgggagtgttgcagacgcatcatatacacgtgatgtgtttgctcgcgcgtgga
cggcacgtgcgaggggcggcgtcgtcgagattgcttcaggcgatgacgacgtcgtgcgcg
ccgagcgctttggcaaacgcagtgcaggggagcgcgtcgggtgcgctagaggtgagcgcg
ctcgcgcgattgaacgattggttcgccgatgtgattgcgccaccgatatccatcgacgac
gacgacgacgagaagagtggtttggagaggttgaccaaggatgcgcagtggcgtcgtttg
gcgtttcggttggcgatgcggcgcgcggggatgggatcaactcgcggcggtgcgagcgcg
tacgcggcgaagctggcgcgatcgtggacgctccgcggtcgagaaaagatcagcgaagag
gaatcagcggctctatttgcgtcaatttgtcagggattcggagtggtgtgtcgcgtcgta
tcgtcgctcgaacccgtgccacttcgagcgagcgctacgacgctcgaacacatgggcgtt
ttgacgacgcccaaaccgccgcccgtcgtgagaaaggaaactagaaatacacatcgattt
gtccgtcattggtgtgaggttttatgtgctaggcacgacgaaaagggtgtcgacaaaaag
gcgacaaacgcgcgatgggtgagcgtggtcccgacaacgcgcgggtcggtggacgacatg
ggcgtaattttcggcgaaagaaagcgtacgacgaccgctgacgcgacatcttcgatgccg
tacgtcgtcgcgttttatggtgactctggagcgcgcgatgtgacgagaaagtatgccgcc
gcgttttcgcaagcgctgcatcatcgaacaccagattggaagtggtgggagacaatcaca
acgcacatggatagactccaccgcgacgcggtcgcatgcgattgctcgcccgagcttcga
aaactgatcgacagcgcggacaaggcggagctattcgagatggacacgcgtagctcgaag
gagcgcgtgccaggaacgatgacggagataaaaaatcatccactctgggtagtcgagcgc
ttcttgtcccgctcgcagtgcatccacccgcgacatcccgtgaaagcgctcatagcgggc
gaaccagtatttcctaggtcgtgtgtcaaggagttgaagagcgcggagcgatggaagagt
gaatgcagacgacgcgtaatcgacgcactgatagactcgccagtgcgcaagattcacagt
cgagctttgcaagcacgcatcaaacaactcacgcgcgcgcgcgaagggtggttcttatcc
aaggccgaagggtcgaaggagcgtttacagtccgaggagtggcgcgcgacgatgtccaag
gacgaggagtgcccgcaagatccgcaaactattcttggtgatattccgctctacggagag
tggcaaactgagccgtggacacctccatccgccgtcggcggcgtcgttcccaagaacgac
cgcgggaacgtcgatctgtacggcaatgcattacctcctcccgggaccgtgcacgtgaac
ttaccgcgggtatcgaaaaccgcgaagttgatgaacattgactacgccccggcgctcgtc
gggttcgagtacaaagctggaggaaagacactcccacttttcaacggcatcgtcgtctgc
gaagagttcaaggatgaactgctcaagagacacgaagacgctgaggaggcgcgtcgaatt
accctcgaggcgaaggcgtacaaggaggcgtgcgcgcactggcgtctacttctcggagcc
atatggactcgcgctagacttcgtgatgagttccaggatggtgtcactaccgaggaagct
gacccgaccgctcgccgcatcgccgccgctcgagctatgaatgaaagggatgaaaccacg
acggagcgggacgagcgactcgttctcggcgccgccgcatttgttgaagaattgtaa
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