KEGG   Ostreococcus tauri: OT_ostta14g02480
Entry
OT_ostta14g02480  CDS       T01358                                 
Name
(RefSeq) DNA repair protein Rad4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
ota  Ostreococcus tauri
Pathway
ota03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    OT_ostta14g02480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta14g02480
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      OT_ostta14g02480
SSDB
Motif
Pfam: BHD_3 BHD_1 Rad4 BHD_2
Other DBs
NCBI-GeneID: 34946391
NCBI-ProteinID: XP_022841377
OrcAE: OT_ostta14g02480
UniProt: A0A096PBY2
LinkDB
Position
14:complement(440596..443052)
AA seq 818 aa
MPRETLKGASTAAVASAIDKRRRKREDEHQSAREENLMETPRDDARALPSGGKTALEIAT
MLNVPLPLAKFGIGGVDDGGSGACGAEAKDDASESEEWDDVCGDDYGSIAYEDEDAGVEN
GDAEGGRGVKWARGSDEAETESSGGPKRKKKKYVRRLSDDERAGVLQTHHIHVMCLLARG
RHVRGAASSRLLQAMTTSCAPSALANAVQGSASGALEVSALARLNDWFADVIAPPISIDD
DDDEKSGLERLTKDAQWRRLAFRLAMRRAGMGSTRGGASAYAAKLARSWTLRGREKISEE
ESAALFASICQGFGVVCRVVSSLEPVPLRASATTLEHMGVLTTPKPPPVVRKETRNTHRF
VRHWCEVLCARHDEKGVDKKATNARWVSVVPTTRGSVDDMGVIFGERKRTTTADATSSMP
YVVAFYGDSGARDVTRKYAAAFSQALHHRTPDWKWWETITTHMDRLHRDAVACDCSPELR
KLIDSADKAELFEMDTRSSKERVPGTMTEIKNHPLWVVERFLSRSQCIHPRHPVKALIAG
EPVFPRSCVKELKSAERWKSECRRRVIDALIDSPVRKIHSRALQARIKQLTRAREGWFLS
KAEGSKERLQSEEWRATMSKDEECPQDPQTILGDIPLYGEWQTEPWTPPSAVGGVVPKND
RGNVDLYGNALPPPGTVHVNLPRVSKTAKLMNIDYAPALVGFEYKAGGKTLPLFNGIVVC
EEFKDELLKRHEDAEEARRITLEAKAYKEACAHWRLLLGAIWTRARLRDEFQDGVTTEEA
DPTARRIAAARAMNERDETTTERDERLVLGAAAFVEEL
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgccgcgcgagacgctcaagggcgcgtcgaccgcggcggtggcgtcggcgatcgataaa
cgacggagaaaacgcgaggatgagcatcaatcggcgcgcgaggaaaatctcatggaaacg
ccgcgcgacgacgcccgcgcgctcccttcgggcggtaagacggcgctggagatcgcgacg
atgttgaacgtgcccttgccgctcgccaagttcggtatcggtggcgttgacgatggtggg
agcggcgcgtgcggggcggaggcgaaggacgacgcgagcgagagcgaggagtgggacgac
gtgtgcggcgacgattacggctcgatcgcgtacgaggacgaggacgcgggagtagagaac
ggtgacgcggaggggggacgtggggtgaagtgggcgcgcgggtcggacgaggcggagacg
gagagctcgggcggaccgaaacggaagaagaagaagtacgtgaggagattgagcgatgac
gagcgcgcgggagtgttgcagacgcatcatatacacgtgatgtgtttgctcgcgcgtgga
cggcacgtgcgaggggcggcgtcgtcgagattgcttcaggcgatgacgacgtcgtgcgcg
ccgagcgctttggcaaacgcagtgcaggggagcgcgtcgggtgcgctagaggtgagcgcg
ctcgcgcgattgaacgattggttcgccgatgtgattgcgccaccgatatccatcgacgac
gacgacgacgagaagagtggtttggagaggttgaccaaggatgcgcagtggcgtcgtttg
gcgtttcggttggcgatgcggcgcgcggggatgggatcaactcgcggcggtgcgagcgcg
tacgcggcgaagctggcgcgatcgtggacgctccgcggtcgagaaaagatcagcgaagag
gaatcagcggctctatttgcgtcaatttgtcagggattcggagtggtgtgtcgcgtcgta
tcgtcgctcgaacccgtgccacttcgagcgagcgctacgacgctcgaacacatgggcgtt
ttgacgacgcccaaaccgccgcccgtcgtgagaaaggaaactagaaatacacatcgattt
gtccgtcattggtgtgaggttttatgtgctaggcacgacgaaaagggtgtcgacaaaaag
gcgacaaacgcgcgatgggtgagcgtggtcccgacaacgcgcgggtcggtggacgacatg
ggcgtaattttcggcgaaagaaagcgtacgacgaccgctgacgcgacatcttcgatgccg
tacgtcgtcgcgttttatggtgactctggagcgcgcgatgtgacgagaaagtatgccgcc
gcgttttcgcaagcgctgcatcatcgaacaccagattggaagtggtgggagacaatcaca
acgcacatggatagactccaccgcgacgcggtcgcatgcgattgctcgcccgagcttcga
aaactgatcgacagcgcggacaaggcggagctattcgagatggacacgcgtagctcgaag
gagcgcgtgccaggaacgatgacggagataaaaaatcatccactctgggtagtcgagcgc
ttcttgtcccgctcgcagtgcatccacccgcgacatcccgtgaaagcgctcatagcgggc
gaaccagtatttcctaggtcgtgtgtcaaggagttgaagagcgcggagcgatggaagagt
gaatgcagacgacgcgtaatcgacgcactgatagactcgccagtgcgcaagattcacagt
cgagctttgcaagcacgcatcaaacaactcacgcgcgcgcgcgaagggtggttcttatcc
aaggccgaagggtcgaaggagcgtttacagtccgaggagtggcgcgcgacgatgtccaag
gacgaggagtgcccgcaagatccgcaaactattcttggtgatattccgctctacggagag
tggcaaactgagccgtggacacctccatccgccgtcggcggcgtcgttcccaagaacgac
cgcgggaacgtcgatctgtacggcaatgcattacctcctcccgggaccgtgcacgtgaac
ttaccgcgggtatcgaaaaccgcgaagttgatgaacattgactacgccccggcgctcgtc
gggttcgagtacaaagctggaggaaagacactcccacttttcaacggcatcgtcgtctgc
gaagagttcaaggatgaactgctcaagagacacgaagacgctgaggaggcgcgtcgaatt
accctcgaggcgaaggcgtacaaggaggcgtgcgcgcactggcgtctacttctcggagcc
atatggactcgcgctagacttcgtgatgagttccaggatggtgtcactaccgaggaagct
gacccgaccgctcgccgcatcgccgccgctcgagctatgaatgaaagggatgaaaccacg
acggagcgggacgagcgactcgttctcggcgccgccgcatttgttgaagaattgtaa

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