KEGG   Ostreococcus tauri: OT_ostta14g02810
Entry
OT_ostta14g02810  CDS       T01358                                 
Name
(RefSeq) RNAPII transcription regulator C-terminal
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ota  Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:ota00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ota03036]
    OT_ostta14g02810
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta14g02810
Chromosome and associated proteins [BR:ota03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    OT_ostta14g02810
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     OT_ostta14g02810
SSDB
Motif
Pfam: MMS19_N MMS19_C HeH
Other DBs
NCBI-GeneID: 9837797
NCBI-ProteinID: XP_003083112
OrcAE: OT_ostta14g02810
UniProt: A0A096PC05
LinkDB
Position
14:500674..503862
AA seq 1062 aa
MDVHALARRCADASDDDADDACAATVASACARDRETMVRAVMGMESILCGTDARARRRAT
SILAAATARCVDDLDARGVDALCGFFGGRLGDHASCGAAARGAAASARRASERAVEEVSR
ALFTDARPQSLRQSDRESCLGLANALMRDERTARACARGAGEGDFGEAVARMVSAFDGEK
DPRCVLALGEFWELMPRAFELCGEAAMKAYEENAEELYDVAASYFPVSFKPPRGDSVKIS
RRQLAEAVERAMTASPSFAPWAISHALESLNPSLGPGKMADAARAVRAMGEKWGRRVMEE
YLDLIWRSMRAALSHPNATKMEEDDDPRATTPMAVMTTMFASDFGGGALSRAALTDQSVR
DAEAALRRLASETASKGTCSMEVDGSDGCCGGGCGSGGDDDATTGRVVAASASRVLGAVA
AATPALACEVIQVTLKRILDAAQISSDSTASKAAYASLILATPAIGGALDCCERNAEIGV
RVSVMGDESDRLVRLFSSAALGEINAQNVSEVIILGLAGLHMMCKFPSGFGLASETARVA
VTSNLLDAIVCDHADESEDDVDIRIERAVDALVAAVSHGDEKLTAAVSTGTVLRLADKIS
VDNVRSVSGERAIRTLVAIAHANEAIRSDVARLFCDVTREALSANNFEAASDLINAMCRD
DDGVLTRFMSGANAQTACETLVDFCLDECDTSGSFAANGVRVVASAMANCNAEAQARLAA
RAFDIENDKPEMSCAVICGLRPDVVFDVSRLQDVLKSLVDRATTSTDHGMRAQLVAAACG
SVVRKFPNIEFAMPSQDLSNQGVVLIHGACMRARVMRRDVSPEFEAVVSRLITALDVTLT
NDTHAAKGAARALGMAVGFDAEQRMLALGLRPCTHANEMFLANQRFFTKIAPVLIASARG
SVGEARLFCSYAATKLAGGVPASVALNEQFDLFPFLSDVLIALTTGSLGHDVSSTRTALD
LVSARLSNPALGGGADVVELHAVSLIQALCDIAVERDGTMTMDIRERALDALFASSTLKF
SVTFPVCDRALQAAEFACDDPKRRVRRSAARARQAWIALSSK
NT seq 3189 nt   +upstreamnt  +downstreamnt
atggacgtccacgcgctcgctcgacggtgcgccgatgcctcggacgacgacgccgacgac
gcgtgcgcggcgacggtggcgtcggcgtgcgcgcgcgatcgagaaacgatggtacgcgcg
gtgatgggcatggaaagcattctgtgcgggacggacgcgcgggcgcggcgacgggcgacg
tccatcttagccgcggcgacggcgcggtgcgtcgatgacctggacgcgcgcggtgtcgat
gcgctctgtggattcttcggcggacgcttgggagatcacgcgagttgcggggcggcggcg
cgcggggcggcggcgagcgcgagacgggcgagcgaacgggcggtcgaggaggtttctcga
gcgttgttcaccgacgcgcgaccgcagagcctgagacagagtgatcgtgagtcgtgcttg
gggttggcgaacgcgttgatgcgtgacgagcgaacggcgagggcgtgcgcgcgaggcgcg
ggtgagggcgactttggcgaagccgtcgcgcgaatggtgagcgcgttcgatggcgagaag
gacccgaggtgcgtgttagctttgggtgagttttgggagctcatgcctcgagcgttcgag
ctctgcggagaggccgcgatgaaggcgtacgaggagaatgcggaggaattgtacgacgtc
gcggcgagttactttccagtgagcttcaagccgccgagaggcgattcggtgaagatttcg
cgaaggcagctcgcggaggctgtagagcgggcgatgacggcgtcgccgtcattcgccccg
tgggcgatctcgcacgcgttggagagtttgaacccatctcttggacctgggaagatggcg
gacgccgctcgcgcggtgcgagcgatgggcgaaaagtggggacgtcgcgtgatggaggaa
tatttggacttaatctggcgctccatgcgtgcggcgctgtcgcatccgaacgcgacgaag
atggaagaggatgacgacccgcgagcgacgacgccgatggcggtgatgacgacgatgttt
gcgagcgatttcggcggcggcgctctctctcgcgcggcgttgacggatcagagcgtgcga
gatgccgaggccgctctgcgtcgtctcgcgagcgaaaccgcgtctaaggggacgtgttct
atggaagtcgatggcagcgacgggtgctgcggcggaggatgcggcagtggcggggacgac
gacgcgacgactggacgagtcgtggcggcgtccgcgagccgcgtgctcggcgccgtcgcc
gcggccacgcccgcgctcgcgtgcgaggtcattcaggtgacattgaaaaggatcttagat
gcggcacagatttcttcggacagtacggcgtccaaggctgcgtacgcatcgctcattctc
gccacgcccgcaattggcggtgctttggattgctgtgaacgaaacgccgagataggcgtt
cgagtgagcgtcatgggggacgagagcgatcgactagtgcgtctgttctcctccgcggct
ctcggtgagatcaatgcgcagaacgtgagcgaggtaatcatcctgggattggctgggtta
cacatgatgtgcaaatttccatccgggtttggattggcgagcgaaactgctcgcgtcgcc
gtgacgagcaatttgttggatgccatcgtatgcgatcacgcggatgaatccgaggacgac
gtggacatccgcatagagcgtgcggtcgatgcgctcgtcgcagcagtgagtcatggagat
gaaaaactcaccgccgccgtgtcaacgggcaccgtgttgcgactcgccgataaaatttcg
gtggacaatgtgcggagcgtctcgggcgagcgagcgattcgcactctggtggcgatcgcc
cacgcgaacgaagcgatccgaagcgacgtcgcgcgattattttgcgacgtcacgcgcgag
gcactttcggcgaacaactttgaggcggcgagcgatttgatcaacgcgatgtgccgagac
gacgacggagtcctcactcgtttcatgtccggtgcgaacgcgcaaacggcgtgcgagacg
ctcgtcgatttttgtctcgacgagtgtgatacgtcgggaagtttcgcggcgaacggagtg
cgcgttgtcgcaagtgcgatggcgaactgcaacgctgaggcgcaagcgcgactggccgcg
cgagcgttcgacattgaaaacgacaaacctgagatgtcgtgcgcggtcatctgcggtctt
cgccctgatgtcgtcttcgacgtctcacgtctacaggatgttctcaagtctctcgtggat
cgcgcgacgacgtccactgatcatggaatgcgagcacaactggtcgccgccgcgtgcggt
tcagtcgtgcgcaagtttcctaatatcgagttcgcaatgccatcgcaggatctatcgaac
caaggcgtagtgttgatccatggagcgtgcatgcgcgcgcgcgtcatgcgccgggatgtt
tctcccgagttcgaagcagtcgtgtctcgtctcatcaccgcactcgatgtgactttgaca
aacgacactcatgcggcgaaaggcgccgcgcgcgcgcttggaatggcggtcggattcgat
gccgaacaacgaatgctcgcgctcggcttgcgtccgtgcacgcatgcaaatgagatgttt
ttggcgaatcaacgattcttcacgaaaatcgcgccggtgctcatcgccagcgctcgcggc
tccgtcggagaggctcgtctattttgctcttatgcggcgaccaagctcgcgggcggcgtt
cccgcctccgtcgcactgaacgaacagttcgatctgttcccgttcttgtcggacgtcttg
attgcgctgacgacgggttcgctcgggcacgacgtctcctcgacgcgcacggcgctcgat
cttgtgagcgcccggctctccaatcctgcgctcggcggcggtgcggacgttgtcgagctg
cacgctgtgtctctcatccaagccctgtgcgacatcgcggtcgagcgagacggaacgatg
accatggacatccgcgaacgcgccctcgacgccctcttcgcgtcgtcgacgctcaaattc
agcgtcacgtttcccgtttgcgatcgagcgctccaagccgccgagttcgcgtgcgatgat
ccaaaacgtcgcgttcgccgaagcgccgcgcgcgcgcgccaggcctggatcgcgttatcg
tccaaatag

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