Ostreococcus tauri: OT_ostta14g02870
Help
Entry
OT_ostta14g02870 CDS
T01358
Name
(RefSeq) Synaptobrevin
KO
K08517
vesicle transport protein SEC22
Organism
ota
Ostreococcus tauri
Pathway
ota04130
SNARE interactions in vesicular transport
ota04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
OT_ostta14g02870
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
OT_ostta14g02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta14g02870
Membrane trafficking [BR:
ota04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
OT_ostta14g02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
iPGM_N
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
9837801
NCBI-ProteinID:
XP_003083120
OrcAE:
OT_ostta14g02870
UniProt:
A0A1Y5IG28
A0A096PC09
LinkDB
All DBs
Position
14:complement(512976..513674)
Genome browser
AA seq
232 aa
AA seq
DB search
MVRATLLARVNDGLPLAESLDASTRTTPSVDPVEDGTETAKRQAKALFKKLSDPSSGPPP
SRMTIETTSELLMHYVIHENVCYLCVCDRTYPKKLAYAYLEELQNEFSERHGEEVGTVGR
PYAFIKFDTFIQRTKKLYSDARTQRNLNKLNDDLHDIQQIMTRNINDIMGQGERLDRVSA
MSGNLSEASKKYSKKARDLSRQALIQKYMPLAIFCGIVILTLMLRRYVFTYG
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcgcgacgctcctggcgagagtgaacgatggtttacccctcgcggagtccctg
gacgcgtcgacgcgaacgaccccgagcgtggacccggtggaggatggcacggagacggcg
aagcgacaagccaaggcgctgtttaaaaagctgagtgatccctcgagcggaccgccgccg
tcgaggatgacgatcgagaccacttcggagttgttgatgcactacgtgatacacgaaaac
gtgtgttatctgtgcgtgtgcgatcgaacgtatccgaaaaagttggcgtacgcgtacctg
gaggagttgcaaaacgaattcagcgagagacacggggaggaggtgggaacggtgggacgg
ccgtacgcgttcattaaattcgatacgttcattcagaggacgaagaagttgtactcggac
gcgcggacgcagagaaatctgaataaactgaacgatgacctgcacgatattcaacagatc
atgacgcgaaacatcaacgacatcatgggacagggcgagcggttggatcgcgtgagtgcg
atgagcgggaatctgtccgaggcgagtaagaagtatagcaaaaaggcgagggatctgagc
aggcaggcgttgattcaaaagtacatgccactggcgatattttgcggcatcgtaatcttg
accctcatgctcaggagatacgtcttcacgtacggttaa
DBGET
integrated database retrieval system
