Ostreococcus tauri: OT_ostta15g00170
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Entry
OT_ostta15g00170 CDS
T01358
Name
(RefSeq) Transcription factor TFIIB, conserved site
KO
K03124
transcription initiation factor TFIIB
Organism
ota
Ostreococcus tauri
Pathway
ota03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OT_ostta15g00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ota03021
]
OT_ostta15g00170
Transcription machinery [BR:
ota03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
OT_ostta15g00170
Prokaryotic type
Archaeal type
TFB
OT_ostta15g00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
9837930
NCBI-ProteinID:
XP_003083158
OrcAE:
OT_ostta15g00170
UniProt:
Q00VJ4
LinkDB
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Position
15:27644..28831
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AA seq
395 aa
AA seq
DB search
MQAMSAQSVNHAPSPSAQEIKKFTQICPKCATHTAIVEDHASGDLICTECGLVIESRIID
ECSEWRTFGDGDKDKNGADPSRTVGATNVMLTGGGLSTTIGKNPDGTYNATLTRLHNRGM
NPDKALIAAFHSIGEFADAMGMNRVVKDGACDLYRMVTSAHSTLGKSNAAMYAACLYIAA
RQEGMTRTFKEVCGAAQGTTVKEIGRCYKFILKVCDGLNMQMNEQMITPELLTNRFCGNL
GIGEHEYLKLCSHIVRTFKELRDSEGHRSEKQPASVAAASIFISAVVKGIHKDKASLFRI
SEVSGMAEVTIRTSFFDMVPYASKLLPSANQDRLAFLLEEAERMRAGSTMTLPTHAAKQY
LPASMPLLTLDDIDAGDVFDELPGDVKIEVKEEIT
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgatgagcgcgcagagcgtgaaccacgccccgagcccgagcgcgcaggagatt
aaaaagtttacgcaaatctgtccaaagtgcgccacgcacaccgcgatcgtcgaggatcac
gcgtctggggatttgatatgcaccgaatgcggattggtgatcgaatcgaggatcatcgac
gagtgctcggagtggcggacgttcggggacggcgataaggataagaatggggccgatccg
tcgcgcacggtgggggcgacgaacgtcatgctcacgggtggcggattgagcacgacgatc
gggaagaatccggatgggacgtataacgccacgctgacgcgattgcataatcgcgggatg
aatccggataaggcgctcatcgcggcgtttcacagcatcggcgagttcgcggatgcgatg
gggatgaatcgcgtggtcaaggacggagcgtgcgatttgtatcggatggtgacgagcgcg
cactcgacgctggggaaatcgaacgcagcgatgtacgcggcgtgtctgtacatcgccgcg
aggcaagaagggatgacgcggacgtttaaggaggtgtgcggcgcggcgcaaggaacgacg
gtgaaggaaataggacgatgctacaagttcatcttaaaggtgtgcgatgggttgaacatg
caaatgaacgaacagatgatcacgccggaactcctcacaaatcgcttctgcggcaacctc
gggatcggtgagcacgagtacttgaagctgtgctctcacatcgtgaggacgtttaaggaa
ctgagagactcggagggtcatcggagcgagaagcagcccgcgtccgtggccgcggcttcc
atcttcatctccgccgtcgtgaaggggattcacaaagataaggcgagcctattccgaatc
tccgaggtgagtggcatggcggaggttaccattcgcacgtcgtttttcgacatggtcccg
tacgcctcgaagttgctaccctcggcgaaccaggatcggttggcgttcttgttggaggag
gcggagcgcatgcgcgctggatcgacgatgacgttgccgacgcacgcggctaagcaatat
ctgccggcctcgatgccgctgttgacgctcgacgacatcgatgcgggcgacgtctttgac
gaattgccgggagatgtgaaaatagaagtgaaggaggagatcacgtag
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