Ostreococcus tauri: OT_ostta16g00300
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Entry
OT_ostta16g00300 CDS
T01358
Name
(RefSeq) Zinc finger, C2H2
KO
K27103
serrate RNA effector molecule
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta16g00300
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
OT_ostta16g00300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SERRATE_Ars2_N
ARS2
Motif
Other DBs
NCBI-GeneID:
9831152
NCBI-ProteinID:
XP_003083474
OrcAE:
OT_ostta16g00300
UniProt:
Q00UM6
LinkDB
All DBs
Position
16:44142..45587
Genome browser
AA seq
481 aa
AA seq
DB search
MEVDREQYYDDGGGSSRRRNRGERGDRHHPYGDDDRRGGDRGGRGGRGGRGRDRGPRDDG
ALSFRDFCYKYLRDDTTPAEAERRYEEYQKENQEAFYERYWRDHRHDEHERARNDPRRLV
ETLARRDDVSRAHAQEFFTARESGSLDVYGAEEGGHDEGDDADVNMNEGGDNAEGGEQHH
KKRSVAPIEAWHPVRLGFDFKQAGKLIAALDAEKGIEGNPLLNADEGVGMDTEASAEEDA
ATLETLGNEEGTAEKLDERLCYLIRVHGIDYYKRVSEMHPVTFLEKVTMTTTFSKRDPKP
AEPVRPVAENPYGVRWSAALDGNVKRRITEGDPQVKKLGTEEIERKLEEWVQSCVVKHDE
QRYGCALNCTKLFVAPEFLVKHVKTKHASAYEQQRESLIDEQFHRNVLEYLKYEENRKAS
KRGRRKGGMFGGMMMMPGADGQFIQVPVAAQGGARMIQGMARYTDLDASVPERVVIDYGD
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgatcgagaacagtattacgatgacggtggtggaagctcgagacgacggaac
cgcggtgaaagaggggatcgacaccacccgtacggggatgacgatcgacggggcggagat
cgcggcggacgcggcggacgagggggacgaggacgcgatcgaggcccgcgagacgacggt
gcgctgagcttccgggatttctgctataagtatctccgagacgacaccacacccgcggag
gcggagcgaaggtacgaggagtaccaaaaggaaaaccaagaggcgttctacgagaggtac
tggcgggaccatcgacacgacgagcacgaacgggcgagaaatgatccgagacgactcgtg
gagacgttggcgaggagagacgacgtttcccgcgcgcacgcgcaagagttcttcaccgct
cgggagagcgggagcctggacgtgtacggcgccgaagaaggcggccacgacgagggagac
gacgccgacgtcaatatgaacgaaggcggcgacaacgccgagggaggggaacaacaccac
aaaaaacgatccgtggcaccgatcgaggcctggcatcccgtgcgtctcggctttgatttc
aagcaagcgggcaagctcatcgccgctctcgacgcggagaagggcatcgaaggcaaccct
ctgttgaacgcggatgagggcgtcggcatggacacggaggcatccgctgaggaggacgcc
gccacgctcgagacgctcgggaacgaggagggtacggcggagaagttggacgagcgcctg
tgctatctgattcgcgtgcacgggatcgattactacaagcgagtctccgagatgcacccg
gtgacgttcctggagaaggtcaccatgaccaccaccttctccaagagggacccgaagccc
gccgagccggtccgaccggtcgccgaaaacccgtacggggtacgctggagcgccgcactc
gacggtaacgtcaagcgccgcattaccgagggtgatccgcaggtgaagaagctcggcact
gaggagattgagcgcaagctcgaggagtgggtgcaatcgtgcgtcgtcaagcacgacgag
cagaggtacgggtgcgcgctcaactgcaccaagctcttcgtcgcccccgagttcttggtg
aagcacgtgaagaccaagcacgcgagcgcctatgagcagcagcgcgagagtttgatcgac
gagcagttccacagaaacgtcctggaatacctcaagtatgaggagaaccgtaaggcgagc
aagagaggccggagaaagggtggcatgttcggtggtatgatgatgatgcccggcgcggac
ggacaatttatccaggttcccgtcgccgcgcagggtggcgcgcgaatgatccaagggatg
gctcgatacaccgatttggacgcgagcgtccccgagcgcgtcgtcatcgattacggagat
atttga
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