KEGG   Ostreococcus tauri: OT_ostta16g01120
Entry
OT_ostta16g01120  CDS       T01358                                 
Name
(RefSeq) Putative U6 snRNA phosphodiesterase
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ota  Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:ota00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta16g01120
Spliceosome [BR:ota03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    OT_ostta16g01120
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2 EccE
Other DBs
NCBI-GeneID: 9830936
NCBI-ProteinID: XP_003083562
OrcAE: OT_ostta16g01120
UniProt: Q00UD8
LinkDB
Position
16:complement(173754..174377)
AA seq 207 aa
MGPRARPGVDGTFLTHVRAPVGAVARASTLERALETVREAFVDDVDDGRGTDDGHVSMSK
PFETRAEDWETMRAGVRKELRGMEAIEVTFDALRVFVNEDETRAFVAAGFREGSERGDKR
ALVRAIERVNRALEPLGFPRYFDDPDPHVSLLSMTRPGRERVDELRRRVESMDVGEWRVK
VNRIVIDISGQPQKTVWGRAPLPAPDL
NT seq 624 nt   +upstreamnt  +downstreamnt
atgggcccgcgcgcgcgccccggggtcgatgggacgtttctcacgcacgtccgagccccc
gtgggcgcggtcgcgcgcgcgtccacgctcgagcgggcgctggagacggtgcgggaggcg
ttcgttgacgacgtggacgacggacgcgggacggacgacgggcacgtctcgatgtccaag
ccgttcgagacgcgcgcggaggattgggagacgatgcgcgcgggcgtgcgtaaggaactg
cgagggatggaggcgattgaggtgacgtttgatgcgctcagggtgtttgtgaatgaggat
gagacgcgggcgttcgtcgcggcgggctttcgcgaggggagcgagcgaggagataagcgc
gcgctcgtgcgcgcgatcgagcgggtgaacagagctcttgaaccgttgggatttccgagg
tatttcgatgatccagatccgcacgtgtcgttgttgtcgatgacgcgaccgggccgggag
cgcgtggacgagctgcggcggcgcgtcgagtctatggacgtcggcgagtggcgagtgaag
gtgaatcgaatcgtgatcgatatctcgggacagccgcaaaagacggtgtggggacgcgcg
ccgcttccggcgccggatttatag

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