KEGG   Ostreococcus tauri: OT_ostta16g01180
Entry
OT_ostta16g01180  CDS       T01358                                 
Name
(RefSeq) U2 auxiliary factor small subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ota  Ostreococcus tauri
Pathway
ota03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OT_ostta16g01180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ota03041]
    OT_ostta16g01180
Spliceosome [BR:ota03041]
 Complex A
  U2 snRNP components
   U2 related factors
    OT_ostta16g01180
 Complex B
    OT_ostta16g01180
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 9830939
NCBI-ProteinID: XP_022840322
OrcAE: OT_ostta16g01180
LinkDB
Position
16:185608..186351
AA seq 247 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSASQTVLLTNMYRAEGAGGT
VDPRDAASGKSASASAGQGHFEAFVEDLFEELDECGEIEGVNVCDNATDHMAGNVYVKFV
DEDGARRALEKLQGRYYDGRPILVEYSPVTDFKESTCRQYEENSCTRGGYCNFMHLRPIG
RSMRKQLYGRYLERRRRDDDERRDRRSRSPPRKRSRDDEDDGRVNAKGMSDDARRAMFAQ
WNEEGAD
NT seq 744 nt   +upstreamnt  +downstreamnt
atggctgaacacttggcgagcatcttcggcaccgagaaggaccgcgtgaactgcccgttc
tactttaagatcggcgcgtgtcgacacggcgatcggtgctctcgattgcacaataaaccg
tcggcgtcgcagacggtgttgttgacgaacatgtacagggcggagggcgcgggcgggacg
gtggacccgcgagacgcggcgagcgggaagagcgcgagcgcgagcgcgggccaagggcac
ttcgaggcgttcgtggaggacttattcgaggagttggatgaatgcggggagattgagggg
gtgaacgtgtgcgataacgcgacggatcacatggcggggaacgtgtacgtgaagtttgta
gacgaagacggagcgagacgggcgttggagaagttgcaggggcggtactacgatgggagg
ccgatcttggtggagtactcgccggtgacggattttaaagagagcacgtgcaggcagtat
gaggagaactcgtgcacgcgggggggatactgtaacttcatgcacctgcggcccatcggg
cggtcgatgcggaagcagttgtacggacggtacctggagcgaaggagacgagacgacgac
gagcgacgggatcgtcggtcgagaagtccgccgaggaagcgctctcgcgacgacgaagac
gatggacgcgtcaacgcgaaggggatgtccgacgacgcacgacgagccatgttcgcgcag
tggaacgaagagggtgcggattga

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