Ostreococcus tauri: OT_ostta16g01210
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Entry
OT_ostta16g01210 CDS
T01358
Name
(RefSeq) NOT2/NOT3/NOT5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ota
Ostreococcus tauri
Pathway
ota03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OT_ostta16g01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta16g01210
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
OT_ostta16g01210
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
OT_ostta16g01210
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Paralog
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GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
9830946
NCBI-ProteinID:
XP_022840324
OrcAE:
OT_ostta16g01210
UniProt:
A0A096P7W7
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Position
16:complement(191573..192628)
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AA seq
351 aa
AA seq
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MMLDVNGDGENVVVEGDAEITDGETTREDESTNRADERRETEKISLDRDGGGGDDGDEDD
EGSVDVIAPETPGDRERALGRSERTRSASTPTTPSRTEAKKKRVDDGEGDDEAFGGSSLR
DKFDATSASIDDRASALGDIFDLPGNGLLSLDELSRGGHATGNLSPDDLAYGRAGDAAAT
PTGVSIRGVLISDPHVNHRLLEIAAMKLTPDNNDAAWRLSSERVKRRTERRSNAFPRSYP
TRAPPGLDSPLLFKRLDADALFFTFYFCPTPKKKLLAAAELRASNWRFHKALGTWFARLE
LPKVINEAERYEQGSVIYFDHNMQVNEADSSTNGWCQRSRSDFTSRYDDFI
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatgttggatgtaaacggagacggtgagaacgtcgtggtcgagggagacgcggagatt
acagatggggagacgacgagggaagacgaatcgacgaatcgcgcggacgagaggcgggag
acggagaagatcagtctcgatcgggacggcggcggcggtgacgacggtgacgaagacgat
gaagggtccgtcgatgtcatcgctccggagacgccgggtgatcgagagcgcgctcttggg
agatcggagcgaacgcgatcggcgtcgacgccgacgactccgtcgaggacagaggcgaag
aagaaacgcgtggacgacggcgagggcgacgacgaagccttcggtggatcgtcgcttcgc
gataaattcgacgccacgtctgcgtccatcgatgaccgtgcgtccgcgctcggagatatc
tttgacctaccgggcaacggccttctcagcctggatgagctgagccgaggcggacacgcg
acgggaaatttgtcgccggatgacttggcgtacgggcgcgccggcgacgccgcggcgaca
ccgacgggagtgagtatacgcggcgtgctcatcagtgacccgcacgtgaatcatcgccta
ctcgaaattgcggcgatgaagctcacgcccgataacaacgacgccgcctggcgcttatcg
agcgaacgtgtgaagcgtcgaactgagcgacgatcgaacgcgttcccgagatcatatccc
acacgcgcaccccctgggctggactcacctctgttgttcaagagattggacgccgatgcg
ctcttctttacgttttacttttgcccgacgccgaagaaaaaactcttggcggcggcggaa
ctcagggcgtccaattggagattccataaagcgctcggaacatggttcgctcgattggag
cttccaaaagtaatcaacgaggccgagcgctacgaacagggctcggtgatttacttcgac
cacaacatgcaggtgaacgaggcagactcgtcgacgaacggttggtgccagcgctcacgc
tcggattttacttctcgatacgacgacttcatctga
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