Ostreococcus tauri: OT_ostta17g01830
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Entry
OT_ostta17g01830 CDS
T01358
Name
(RefSeq) SNF2-related
KO
K19001
ATP-dependent DNA helicase
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta17g01830
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
OT_ostta17g01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
ERCC3_RAD25_C
DBINO
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
9838088
NCBI-ProteinID:
XP_022840477
OrcAE:
OT_ostta17g01830
UniProt:
A0A096P990
LinkDB
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Position
17:complement(294896..297157)
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AA seq
753 aa
AA seq
DB search
MATKRAKTAARDDDDVVDAARASEEEDGRGVGGDETNDDGCDATRDAPLLVRADAEASYD
DLTGAALTGIEARAIEAEKELVAARTAKSPEKGTGGDARETKLDERKFKQLDALLDQTTI
YSQFLSEQMDTLEEEEGGASGRSPNGTNGKRGTDGKSTTLGKRKKMSEQEELEATKKMLP
LMEGGSMRDYQLKGVKWMISLYQNGLNGILADQMGLGKTVQTIGFLSHLRSKGVLGPYLV
IGPLSTLSNWVSEFQRWTPSIPVILYHGTKQERAEKRMEHLPTTTPIKPTFPVIVTSYEV
VMADRKFLQKYNFKYLVVDEGHRLKNFDCKLIRELKYIPTANKLLLTGTPLQNNLPELWS
LLHFLLPDVFSSLSQFQSWFDFADNIGNEDETQADVDKNEQEHRARVVQKLHGILRPFLL
RRLKGDVELSLPRKKEILLYAQMVPKQRDFNDALVNKTMQELLQQVAGSGRIPVGHTAVN
NLLMQLRKNCNHPDLITGGLDGSIMFPSADELVEQCGKMQLLDRLMKKLRARGHKVLVFS
QMTRMLDLLESYFQQRGENVCRIDGSVKQDDRREFIAKFNTDPDYGIFLLSTRAGGLGIN
LTAGDTVIIYDSDWNPHQDLQAMDRVHRIGQTKPVHVYRLATAKSVEGKMLKKAASKLAL
EKLVVTGGGFKQEKTDGDRALGAEELMALLKGETAPGDEDLPQSANISDADLDVILDRRD
LLGEIPPNPERGVGWEDVEDRSGMSLLGNVSET
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagcgcgcgaagacggccgcgagggacgatgacgacgtcgtcgacgccgcg
cgcgcgtcggaggaggaggacggacgcggcgtgggcggtgatgagacgaatgatgatgga
tgcgatgcgacgcgcgacgccccgttgctcgtgcgcgcggacgcggaggcgtcgtacgac
gatctcacgggcgcggcgttgacgggcatcgaggcgcgggcgatcgaggcggagaaggag
ctggtggcggcgagaacggcgaaatcgccggagaaagggacgggtggggacgcgcgcgag
acgaagctggatgagcgcaagtttaaacagctggacgcgttgttggatcagacgacgatt
tattcgcagtttttgagcgaacagatggatacgttggaggaagaggagggtggtgcgagc
gggcggagtccgaatgggacgaatgggaagcgtgggacggatgggaaatcgacgacgctg
ggaaagcggaaaaagatgagcgagcaggaggagttggaggcgacgaagaaaatgcttccg
ctcatggagggcggatcgatgcgggattatcagttgaagggagtgaagtggatgatttcg
ctgtatcagaacgggttgaacgggatcttggcggatcagatgggtctggggaagacggtg
cagacgatcggttttctctcgcacctgcgatcgaagggcgtcttggggccgtacttggtg
atcggtccgctctcgacgctgagtaactgggtgagcgaatttcagcgatggacgccgtcg
attccggttattttgtaccacggcaccaagcaagagcgtgcggagaagcgcatggagcac
ctgccgactacgactccgatcaagcccacgtttccagtcatcgtcacctcgtacgaagtc
gtcatggcggatcgaaagtttttgcaaaagtacaatttcaagtatttggtcgtggacgag
ggtcacagattgaagaactttgattgcaaactcattcgtgagctcaagtacattccgacg
gcgaacaagctgttgctcactgggacgccgctgcaaaacaacctcccagagctgtggtcg
ctcttgcacttcttgctcccagacgtctttagctcgctgtcgcagttccagtcttggttc
gattttgcggacaacatcgggaatgaggatgaaacgcaagcggacgttgacaagaatgag
caagagcatcgcgcccgcgtcgtgcagaagttgcacgggattttgagaccgttcttactg
cgccgattgaagggtgacgtcgagctttcgctcccgcgcaaaaaggaaatcctcctgtat
gcgcagatggtccccaagcagcgcgatttcaacgacgcgctcgtgaataagacgatgcag
gaactgttgcaacaagtcgccggtagtggtcgcatcccagtcggacacaccgcggtgaac
aatttgctcatgcagttgagaaaaaattgtaaccacccagatctcatcacgggcggcttg
gacggctcgatcatgttcccgtcagcggatgaactcgtggagcagtgcggtaagatgcaa
ttgctcgaccgcttgatgaagaagcttcgcgcgcgcggacacaaggttttggttttctcc
cagatgacgcgcatgttggacttgctcgagtcgtactttcaacaacgcggagaaaacgtt
tgccgcatcgatggctcagtcaagcaagacgacagacgcgaattcatcgcaaaattcaac
accgatcccgattacggaatctttttgctctccacgcgtgccggaggtttggggatcaac
ctcaccgccggggacacggtcatcatttatgactcagattggaacccgcatcaagacttg
caggcgatggatcgcgtgcacagaatcggtcagaccaagcccgtgcacgtctaccgcctc
gccacggcgaaatcggtggagggcaagatgttgaagaaggcggcgtccaagctcgcgctc
gaaaagcttgtcgtcaccggcggcggtttcaagcaagagaagacggatggcgaccgcgcg
ttgggcgccgaagagctcatggccctcctcaagggcgagaccgccccaggagacgaggac
ttaccgcagagcgcaaacatttccgacgccgacctagacgtcatcctcgaccgacgcgat
ttactcggtgagatcccacccaacccggagcgcggcgtcggatgggaagacgtcgaggat
cgttccggaatgagtctcctcggtaacgtctccgagacttga
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