Ostreococcus tauri: OT_ostta17g01890
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Entry
OT_ostta17g01890 CDS
T01358
Name
(RefSeq) Zinc finger, RING/FYVE/PHD-type
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta17g01890
04121 Ubiquitin system [BR:
ota04121
]
OT_ostta17g01890
Enzymes [BR:
ota01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
OT_ostta17g01890
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
OT_ostta17g01890
Ubiquitin system [BR:
ota04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
OT_ostta17g01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
UBC_like
LTN1_E3_ligase_6th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
Halogen_Hydrol
zf-C3HC4_2
C1_1
zf-RING_16
RINGv
Motif
Other DBs
NCBI-GeneID:
9838095
NCBI-ProteinID:
XP_003083965
OrcAE:
OT_ostta17g01890
UniProt:
Q00T84
LinkDB
All DBs
Position
17:<307577..>312762
Genome browser
AA seq
1680 aa
AA seq
DB search
MPTPRTAASRDRASRAVGASTAIGLPGFGFGGYAGSSSLRDEHGSAEEILDDDVASALRR
CAQKSSTATKMKALRELGDALFDSNGEARKSAEALTAIARPWSRAFDRLVGDGDVGCRRD
ASALSGKLAVACGKSLGRLLKTTPLMGAWVKAMCDPASEVAEVAREGFEKTFTSEERRAM
ALARAHDAIMSDLIDCLKRRGPQDMVFKDGTETERHARFELSSRSALGAVRFVCERLCTF
QGDDSDGAAKKFGALLDELSCFKTQIKGEFSSIRRDAYVTLAVISKKSADNALTPAWRDV
LRGQMPKVASTSFDLLTSETEPGAIRDMWELILCLITSTPDAWDAIDIEKDFMHALRKHF
KRGSYGAAGVSAPSLLPLLAHMPPKSLSSRDAEGAAMGGLVGILDAVFTGWSLLSASAVR
SNEARETLPAMREGVLYGVLKLAPTTDHAEECATRVLVDRVVGIWMREFLARGDAMALDL
MCDALNILGSKPHAKSAVIEAWAKLSDITEDALNDPEQGEHASAMYARLCTSGKVTAFAE
ATAPFARAVLEQAKTSPSTQTMQRLADLVESLGVAPFNGAQNLMDLCLRAPAPPNAGAVI
AAVLKHEAGLWDTVLGRTMRASSEDFSSVVVLTDTVRATKNASSLKCDAMDDIVRRCASQ
SSLESCSNLLIAVAEAGSIVSASASRDVFESLSSGEREGPGRKALRSWIWPPPTDAEVTA
SWSVAIGVMFADVLLESQLNVECVIHEAANESDSEHEVEYVEKHLGETQREWRSIERDTQ
RIAELSYDARNSLAMAIVQAAAAMARTQHLGESELVFRLWAQISIHALRSFKLSDDVSAK
CFVDEITESVDDEVNFYWLDAVAREIGWTSLLAAMHADDRITFTIDALSLPSSENKVFTA
AICGDKKLRNVTFSSLIDAMVAAPSEDESVEDALLNFLRTLRDVDAAWIDSQYEVVRYFV
STSKPSIDERSRRLTRLLPWLLPSDMSGGEHAGQFISELVRDTIVGVENRRRPLDGTRFE
LIAACFSRHDDVDGSSFVHSLQDEACAPLMEVYRAIATREAAEAAASAAAARFGGDRSGT
SAETRTSNAEAGIAALTAAIIRRTASSFESRDWGAVVGRLDAWTARRVKSAEVYADGDAV
DGDDGSRALSDAAMVICLIDSLPMELLEPKDKPSSGDLVPYASHGAAAMTVAKALAHAGW
PRERADIIERLYRCVILAGTELHDICEDEDEERRAAFWARCCSETLMWTRVAQLACANAP
TNLSALHAGLAVDNHDASCETISALYRLLTANGVTRDDEATEALRRAAYGMLASKTLMQS
AVVGIDASISDVAKVESALDAALAAVDENENASVENFGTPAVSAGLREDLAALLSGEVDA
PHTVVLLGWALLLRYILSLSIGSSCRERLVNYTRETKAVATLMRDITQSMPLPESMDIES
ESDAPLAWRGIDWSDPTSPTQIFDPRLSLEVLIYGATLHALPASVRTFVSDMKPQRDAKL
LEAATAATVSPALIADEFRAVSAMTFTSDGSGSLTVKPSVNTREVLTTYEIDESSLQLAV
KLPNSYPLAPAELVCAERVGVSEARLRKWMLGISAILKHQNGAVAQGLLQWQRNIDAEFA
GVEPCPICYAVLHPVDHQKPRMSCRQCSNTFHATCLYTWFRSSSKSSCPLCVTPWGATYR
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccccacgcaccgccgcgtcgcgcgatcgcgcctctcgcgcggttggcgcctct
acggcgatcggcctcccggggtttgggttcggtggctacgccggttcttcgtcgcttcga
gacgaacacggcagcgcggaggagattttggacgacgacgtcgcgagcgcgcttcgacgg
tgcgcgcaaaagtcgtcgacggcgacaaagatgaaagcgttacgcgagctcggcgacgcg
ctttttgattcgaacggggaggcgagaaaatcagcggaggcgctgacggcgatcgcgcga
ccgtggagtcgggcgtttgatcgattggttggcgacggcgacgttgggtgtcgaagagac
gcgagcgcgctgagcggaaagttagcggtggcgtgcgggaagtcgttgggaaggctgttg
aagacgacgccgttgatgggtgcttgggtaaaggcgatgtgcgatcccgcgagcgaagtc
gcggaggtcgcgagagaggggtttgagaaaacgtttacgagcgaagagcggcgggcgatg
gcgctcgcgcgagcgcacgatgcgattatgagtgatttgatcgattgcctcaagcgtcga
gggccgcaggatatggttttcaaggatgggacagagacagagcggcacgcgcggttcgag
ctcagctctcgctcggcgctcggtgcggtgaggtttgtgtgcgaacgcttgtgcacgttc
cagggcgacgacagcgatggcgctgcgaagaaatttggcgcgctcttggacgaactgtcg
tgcttcaagacgcagattaagggtgaattttcgtccattcgtcgcgatgcgtacgtcacg
ctcgctgtgatatcgaaaaagtcggcggacaacgctctcacgccggcgtggcgagacgtg
cttcgcggtcaaatgccgaaggttgcctcgaccagcttcgacctcttgacgtccgagaca
gagcccggggcgattcgagatatgtgggaactcattttatgtctcatcacgtcaacgccc
gacgcgtgggacgcaatcgatattgagaaagatttcatgcacgctctgcgtaagcacttc
aagcgcgggagctacggagccgcgggcgtctcagcgccgtcattgctccctctgttagca
cacatgcctccgaaatcgttgagctctcgcgacgccgagggcgcagcaatgggtgggctc
gtcggtatcttagacgccgtcttcaccggttggagtcttcttagtgcgagcgccgtgcgc
tcgaacgaggcgcgggaaactttgcccgcgatgcgtgagggcgtcttgtacggggtgttg
aaactcgcacccacgacagatcacgccgaggagtgcgcgacgcgcgtattggtcgatcgc
gtcgtcggtatatggatgcgagaatttttagcgcgcggcgacgcgatggcgctcgatttg
atgtgcgacgcgttgaacattttgggatccaagccgcacgcgaagagcgccgtcatcgag
gcctgggcaaagctgagtgacatcaccgaagacgcactaaacgatcccgagcaaggtgaa
cacgcgagtgcgatgtacgcacgattgtgcacgtccgggaaagtcaccgcgttcgccgaa
gccacagcgccatttgcgagagcggtgttagagcaagcgaagacgtcgccgtcaacgcaa
acgatgcaaagattggcggatctcgtcgaaagtctcggtgttgctccgttcaacggcgca
caaaacttgatggatttatgccttcgcgcgcccgcgccgccgaacgccggggcggtcatc
gccgccgtgctcaagcacgaagctggcttgtgggataccgtgcttggccgcacgatgcgg
gctagctcagaagatttctcgagcgtcgtcgttctcactgacacggttcgagcgacaaaa
aacgcctcgagtttgaagtgtgacgcaatggatgacatcgttcgtcgatgcgcgtctcag
tcgagtttggaatcgtgttcaaacttattgatcgccgtggcggaagctggctcgatagtt
tcggcgagtgcatctcgcgacgtattcgaaagtctctcatccggcgaaagagaaggacct
ggccgtaaagcgctgcgttcgtggatctggccaccgccaacggatgccgaagtcaccgca
tcttggtccgtcgcgataggagtgatgttcgctgatgtgctcttggagagtcaactgaac
gttgagtgcgtcattcacgaagccgcaaacgaaagcgatagtgagcacgaggtggagtac
gtggaaaaacatctaggcgagactcagcgtgagtggcgttcaatcgaacgtgacactcaa
cgaattgcggagctttcatacgacgcgaggaactcactggcgatggccattgtgcaagcg
gcggcggcgatggcgcgaacgcagcatctgggtgagtcggaattagtgttcagattatgg
gcacagatcagcatccacgcgcttcgatcattcaaactaagcgacgatgtgagcgcgaag
tgtttcgtggacgagatcaccgagagcgtggacgacgaagtgaacttttactggcttgac
gccgtcgcgcgggaaattggttggacatctttgctcgccgcaatgcacgccgacgaccgc
atcactttcaccattgacgccttgtcattgccctccagtgaaaataaagttttcactgcc
gcgatttgcggagacaagaagctcagaaacgtcacgttctcgtcactcatcgacgccatg
gtcgccgcaccttcagaggatgaatccgtggaggacgcgctgctgaattttttacgcaca
ttacgggacgtcgacgcggcatggatcgacagtcaatacgaagtcgtgcggtactttgtg
agcacatctaaaccatcgattgatgagcgttcgcgtcggcttacgcgccttctcccgtgg
ctgcttccttcggacatgtcaggtggtgaacatgctgggcagttcatctctgaacttgtt
cgcgatacaatcgtaggagtcgagaatcgtcgtcggccgctcgatggcacgcggttcgag
ctcatcgctgcgtgtttcagtcgtcacgatgacgtagatggatcgagcttcgtacattca
cttcaagacgaagcgtgcgcaccactcatggaggtgtatcgtgcaatcgcaacgcgtgag
gcggccgaggccgcggctagcgccgccgcggctcgtttcggcggcgacagatccggtacc
tctgctgaaacacgcactagcaatgcggaggccggaatagctgcgctcacagcggccatc
attcgacgcactgcgtcgagtttcgaatctagagattggggtgccgtcgttgggcgactc
gatgcgtggacggctcgaagggtgaagagcgcggaagtctatgccgacggtgatgccgtg
gacggcgacgacggatcacgtgctttgagcgacgccgcgatggtcatatgtctcatcgac
tcgctaccgatggagctgctcgaaccgaaagacaagccgtcgtcaggtgacctcgtgcca
tacgcctctcacggagctgcggctatgacagtcgccaaagcactcgcgcacgccggttgg
cctcgcgagcgagcggacataattgaacgattataccgatgcgtcatcctagctggcact
gagcttcacgatatctgtgaggatgaggatgaagaacgacgcgccgcgttttgggcgcga
tgctgcagcgagacgctcatgtggacgcgcgtggctcagctggcatgcgcaaatgctccg
acgaatttgagcgcattacacgcaggtcttgccgtagacaaccacgacgcttcttgcgag
accatatcggctctgtatcgattactaactgcgaatggcgtcactagagacgacgaggct
accgaggcactgcgtcgcgcggcatatggtatgcttgcgagcaagacgctcatgcagtcg
gcggtggtcggcatcgatgcgagcatctccgatgtcgccaaagttgagagcgctctcgat
gccgcgcttgcagcggtggatgaaaatgaaaacgcatcggtcgagaattttgggactcca
gcggtgagcgctggattgcgagaagatttggcggcgcttttatccggtgaggtcgacgca
ccgcacaccgtcgtgctcctcggttgggccctgctacttcgctacattctctcactatcg
ataggttcgtcttgcagagagcgtttggtgaactacacgcgcgagacgaaggcggtggcg
acgctcatgcgagacatcacacagtcgatgccgcttccggagtctatggatattgaaagc
gaatcagacgcccctttggcttggcgagggatcgactggagtgatcccacgtcgccaact
caaatattcgacccgagactctcgctcgaggtgctcatttatggcgctaccctacacgcg
ctaccggcgagcgttcgaacctttgtgagcgacatgaaaccgcagcgagatgcaaagctt
ctcgaagccgccacggcggcaacggtgtctccagcgctcattgcggacgaattccgagcc
gtatccgcgatgaccttcacctccgatggctccgggtcgctcacggtgaaaccttcggtg
aacacgcgagaggtgttgacgacgtacgaaattgacgagtcgtctcttcagctcgccgta
aagctcccgaattcctaccccctcgcccccgccgagctcgtgtgtgccgagcgcgtgggt
gtctccgaggcccgcctacgcaagtggatgctcggtatctccgccatactcaagcaccaa
aacggcgccgtcgcccaaggcttactccaatggcagcgcaacatcgacgcagagtttgcc
ggcgtcgaaccgtgcccgatctgctacgccgtcctccaccccgtggaccaccagaagcca
cgcatgtcctgtcgacagtgctcaaacacgttccacgccacgtgtctctacacctggttc
cgttcgagctcgaaatcgtcctgtccgctctgcgtcaccccgtggggcgcgacgtaccgt
tga
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