| Entry |
|
| Name |
(RefSeq) ABC transporter, conserved site
|
| KO |
| K05641 | ATP-binding cassette, subfamily A (ABC1), member 1 |
|
| Organism |
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:ota00001]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OT_ostta18g01310
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
OT_ostta18g01310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:ota02000]
OT_ostta18g01310
Transporters [BR:ota02000]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
OT_ostta18g01310
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
18:236784..242447
|
| AA seq |
1831 aa
MGDDDARATGGNAARVVRRSAQFRALIRKNYVLKTKGVLRCCTLCEILVPVIFLALMCLP
RALVPDSRTNDELSRPYSLAGGIESASQRQLKGFRFVVSPATAETMELGRRAYVHASCLS
ERSSAPDRALATDNESWRKSFFNLMYDQAMNSSGVATGVKSAFQAKGYNASAMATACSEA
TLQNAGSFDSEWDAILDEVVVTKADETAALAYIADNPGEVLAYAQFTSGGSISSTTEFKY
TLRMNSTNVNRKEKRVGTFMEEDFSGRWESAYNTDEWTKYRAFAYAQNAFDAAIIDMKDG
GNDYGVTLDASLKPFPWVGMDYNVGGVIAAAFYGFVGALAFQTNVVLVMKSIVVEKELRL
REGMKMMGMSNTMFWWSWFVTHWLSAMISVVLITLVGIYPFIYTNQFIQFLFYTFWVASL
TLWNFWISTFFSKSITATIVGCFVYVVTMVPSIAVRITAPEGTGGWIAACVFPSGAMNMW
GAALAILEVNKKGITFETFNTDVTLKGNVTCAKIFAMVIFDCLLYAFLTFYFDAVWKTEY
GTRRPFYFLFTRDYWFGESARRSAGANRVVGLEQESGDNVEALTQQQLSSASIVVRGLTK
QFGQNVTAVDDLTMTFVPGQVSGLLGHNGAGKTTTISILTGLIDSTSGHATVNGYDTQTQ
MREIRGSLGICPQFDVLWPTLTVREHLELYAAFAGMEKESITPQLERVVAEVALTEKIDV
NSSDLSGGMKRKLSLAVAFIGDPSVVFLDEPTSGMDPYSRRFTWDVIRRRAANCTVLLTT
HFLDEADLLCDRVAIMSAGKLACIGSPLFLKSRFGTGYLLTFARRTRASSGKLDAMAQHN
TNATLRFIQKFVPNAVVHSDVGAELSFALPFESTGVFSELFKALDTQSAELGYTSYGVSC
TTLEDVFLTLAHAGGPNKSTPSEKVDLDVPALEPNDDESQDARMLSIKRTEARKQFATGS
ALLKVQLRRLLWKRRLNLRRTIRQYVMKMIAPCWMVILALYLSKLSWDPSDTINPKLIGR
QMVDNKKMLVTYPSVDVEAGLVSMKLGSNGYDLHPQYSPEINCMCNCLAKDQTITFSALT
CCMYNRTIEAQCTAVAALLLVDNCAKSTQGWDVQADVFGTSCSGLIDTSFDAHLLNIQEK
SRPCDMQPKAPCDVLYVDHYNASHYSHTLYTHQTAYHAVPAAINTANQAILRKRTSDDAA
SIDTTIYWYPSLVNTKKEGDVEESDNASSTFVVAMFIVMGMAILTAGISVFPVYERCNNS
KHLQLVSGVDKRMYWLSHFIADVFSLVLPYVITLLIFVGYNTSYYKDQLGAIALLLFFFL
LTAIPHSHFQGFAYTSEYYTFVGQIATNTFFGVVTTIAGIVTDALKDLNKETLLVSRLFN
YVFPLVIPHFSLGKGLYDLAQNGLDATRKIYREDCMCLVPVVPKGSYTVIADDLGYLIGT
FFMWTAFLFVKEYQEVLSNWRLKRGGFSNVPQQSADEDDDVAAERKRVLDGDVEDDGVVV
HHLSKMYKAMTSSKLAVRNISVGLHRDQCFGLLGINGAGKTTTFKMLTGEFPPTTGDAIV
RARDNTSHSVTSDLDQARKLMGYCPQFNGLQPNFTAREHIEFYAAIRGMPSETIPATTTE
LLKRMDLTKYADRQAGTYSGGNKRKLSVALALVGEPEVVFLDEPSTGMDPEARRFMWDVI
SSMVVGRTIVLTSHSMEECEALCNRIGIMVGGEFKCLGSLQHLKSRFSEGYTIDVRFAEG
KGPAVLNALHATYADLGAEIAETHETEIKMRVTDPEIKLWRMFEAVEALKNSHDETIRID
DYSVSQTTLEQVFIRFAKDQKEETHAAPGLR |
| NT seq |
5496 nt +upstreamnt +downstreamnt
atgggcgacgacgacgcgcgcgcgacgggtgggaacgccgcgcgcgtggtgaggcgttcg
gcgcagtttcgggcgctgattcgtaagaattacgtgctgaagacgaagggcgtgttgcga
tgctgcacgctgtgcgagatcttggttccggtgatcttcttggcgctcatgtgccttccc
agggcgctcgttccggacagtcggacgaatgatgagctgtcgaggccgtattcgctcgcg
ggggggatcgagagcgcgagtcagagacaattgaaagggtttcgattcgtcgtgtcgccg
gcgacggcggagacgatggaattgggacgacgggcgtacgtccacgcgtcgtgcctgagc
gagcgctcgagcgcgccggatagggcgctagcgacggataatgagagttggcggaagagc
tttttcaatttgatgtacgatcaggcgatgaactcgtcgggagttgccacgggagtgaag
tcggcgtttcaggcgaaagggtacaacgcgagcgcgatggcgactgcgtgttcggaggca
accttacagaatgcggggagtttcgattcggagtgggacgcgatcttggatgaggtcgtg
gtgaccaaggcggacgaaaccgcggcgctcgcgtacatcgccgacaacccgggagaggtt
ctcgcgtacgcgcagttcacatccggtggctccatctcgtccacgactgagtttaagtac
acgctgaggatgaactcgacgaacgtcaaccgcaaggagaagagggttggtacgttcatg
gaggaagacttctcgggtaggtgggagagcgcgtacaacaccgacgagtggaccaagtat
cgggcgttcgcctacgcgcagaacgcatttgacgcggcaatcatagacatgaaggacggt
ggaaacgattacggcgtcacattggacgcgtcactgaaaccgtttccctgggttggaatg
gattacaacgtcggcggcgtcatcgctgcagctttttacggctttgtcggcgcgctcgcg
tttcaaacgaatgtcgtcctcgtcatgaaatctatcgtggtagagaaagagttgcgtctc
agagagggtatgaagatgatgggcatgtcgaacacgatgttttggtggtcgtggttcgtg
acccactggctatcggcgatgatctctgtcgtcttgatcactctagtcgggatttaccca
ttcatctacacgaatcagttcatacagttcctattttacaccttttgggtcgcgtctctg
acgctttggaacttttggatatccaccttcttttcaaagtctatcaccgccaccattgtg
ggctgttttgtatacgtcgtcaccatggtgccgtccatcgccgttcgcatcaccgctcca
gagggcaccggaggttggatcgccgcgtgcgtatttccctcgggggcgatgaacatgtgg
ggcgccgctttagcaattttagaggtgaacaagaagggtatcacgttcgagacattcaac
acggatgtgacgctgaagggaaacgtgacatgtgcgaaaatattcgccatggtaattttc
gactgcctcttatacgcgtttctcaccttttactttgacgcggtgtggaagaccgagtac
gggacgcgtcgaccgttttatttcctctttactcgcgactattggttcggagagtcggca
aggcgttccgccggcgccaaccgcgtcgtggggctcgagcaggaatcgggagacaacgtc
gaagcactgacgcaacagcaactcagcagcgcaagcattgtcgttcgcggtcttacgaaa
cagtttggtcaaaacgtcaccgcggtggatgacttgacgatgacgtttgtgccgggtcaa
gtgagcggacttctcggtcataatggcgcgggaaagacgacgacgataagcatcctcacc
gggctgatcgacagtacctccggtcacgcgacagtcaacggatacgatacgcagacgcag
atgcgagaaatccgcggcagtctcggtatttgtcctcaattcgacgtgctctggccaact
ttaacggttcgtgagcacttggagctgtacgctgcattcgcggggatggagaaagaatca
ataacaccgcagctcgagagagtcgttgccgaggtcgcgctgacagagaagattgacgtc
aactcctccgatctctcgggcggcatgaagcggaagctttcgctcgcggtcgctttcatc
ggagatccatcagtcgtgtttctagacgagccaacttccgggatggatccttactcgagg
cgattcacctgggacgtcattcggagaagggcggcgaattgcaccgtgttgctcaccacg
cacttcctcgacgaggccgatttgttgtgcgatcgcgtcgcaatcatgagtgcggggaaa
ctggcttgcatcggatcgccgctattcctcaagtcgagattcggcactggctacttactc
acgtttgcacgacgcacacgcgcgtcgtctggcaagctcgacgccatggcgcagcacaat
accaacgccacgctgagatttatccaaaagtttgtgcccaacgccgtcgtgcacagcgat
gtcggcgccgaactttcgttcgcgcttccttttgaatctaccggtgtgttttcggagcta
ttcaaggcgcttgatacgcagagcgccgaacttggttacacaagttacggcgtgagttgc
accactctcgaggatgtcttcctcactctggctcacgccggtggtccaaacaagtcgaca
ccgagcgaaaaggttgacttggacgtgcccgcgctcgaaccgaacgatgatgagtcgcaa
gacgcgcgcatgctctccatcaaacgtacagaggcgcgcaagcagttcgccaccgggagc
gcgttgctcaaggttcagcttcgtcgattgctatggaagcgtcgactcaacctgagacgg
acaatacgacagtacgtcatgaagatgatcgccccgtgttggatggtcatcttagcgctc
tacttgtccaagctctcgtgggatcctagcgatacgatcaatccgaaactcatcggacgg
cagatggttgacaacaagaagatgctcgtcacgtacccgtcggtcgacgtcgaggcgggt
ttggtgtccatgaaattgggctccaacggctacgacctccatccgcagtactctccagag
atcaactgcatgtgtaactgccttgcgaaggatcaaacgatcacgttcagcgcgctgacg
tgctgcatgtacaataggactattgaggcgcagtgcactgcggtggcggcattgcttctc
gtcgacaactgtgcaaaatccacgcagggctgggacgtacaagccgatgttttcggcacg
tcttgttcgggattaatcgacacgagcttcgatgcgcacttgctcaacatccaagagaag
tctcgcccgtgtgacatgcagccaaaagctccttgcgacgtcctgtacgtggatcattac
aacgcgtcgcactacagtcacacgctgtacacccatcagacggcttatcacgcggttccg
gccgctatcaacactgcaaatcaagcaattttgcgcaaacgcacatcggacgacgctgcg
agcatcgataccaccatttactggtaccccagtctggtcaacaccaagaaggagggtgac
gtcgaggagtcggacaacgcgagctccacctttgtcgtcgcgatgttcatcgttatgggc
atggccattctgaccgctggcatttctgtcttccctgtgtatgagcgatgcaacaactct
aaacatcttcagcttgtcagcggcgttgataagcgaatgtactggctgtcgcatttcatc
gccgacgtcttctcattggtgcttccgtacgttatcactcttctcatctttgtgggttac
aacacgtcgtattacaaggatcaactcggcgccatcgcgttactactgttttttttcttg
ttgacagcgattccacactcccattttcaaggattcgcgtacacgagcgagtactacacc
ttcgtgggacaaatcgccacgaacacctttttcggagttgtcacaaccatcgctggcatc
gtgacagacgctctgaaagatctgaacaaagaaacgcttctggtgagccgactgttcaac
tacgtgtttccgctcgtcattccacattttagcctaggaaaaggtctttacgatctcgcg
cagaacggtctggatgcgacacgaaagatatatcgagaagactgcatgtgtctcgtgccc
gtcgttccgaagggttcgtacacagtcatcgcagacgacttaggttacttgatcggaacc
ttcttcatgtggaccgcgttcttgttcgtcaaggagtatcaagaagtgttgtcgaactgg
agactcaaacgtggcggtttctcaaatgtgccgcagcagagtgctgacgaagatgatgac
gttgccgctgagcgcaaacgagtgcttgatggtgacgtcgaggacgatggcgtcgtcgtg
caccacttgtcgaagatgtacaaggctatgacgtcatcgaaacttgcggtgcgtaacatc
agcgtcggtttgcatcgcgatcaatgcttcggtttgcttggaatcaacggcgcgggtaag
acgacgacattcaagatgctcacgggagaattcccgccgacaactggagacgcgatcgtc
cgagctcgcgataatacctcgcacagcgtgaccagcgatctggatcaagctcggaagctc
atgggctactgtccgcagttcaacgggttacagccgaacttcactgctagggaacacatc
gagttctacgccgccattcgcggcatgccgtcagagacgataccggcgacaaccacagag
ctcctcaagcgcatggatttgaccaagtacgccgaccgacaagcgggcacgtacagtggt
gggaacaaacgtaagctctccgtggcgcttgcgcttgttggagaaccggaagtcgtcttc
ttagacgaaccgtccacgggcatggacccagaagcaagacgattcatgtgggacgtcatc
tcatcgatggtcgtcggacgcactatcgtgctcacttcgcactcgatggaagagtgcgag
gcgctctgcaatcgcatcggtatcatggtcggtggtgagttcaagtgtcttggttcttta
cagcacttgaaatcccgattcagtgaaggttacacgatcgatgtgcgattcgctgagggt
aaaggaccggcagtgttgaacgcactgcacgcgacgtacgccgatctaggcgcggagatc
gcggaaacacacgagacagaaatcaagatgcgtgtcaccgatccggaaattaaactctgg
cgcatgttcgaggccgtcgaggctctgaagaattctcacgacgagacgattcgtatagac
gactacagcgtctcccaaacgacgctcgaacaagtattcattcgattcgccaaggatcaa
aaggaagaaacgcacgcggctccaggtttgcgatag |