KEGG   Ostreococcus tauri: OT_ostta18g01440
Entry
OT_ostta18g01440  CDS       T01358                                 
Name
(RefSeq) Replication factor A, C-terminal
  KO
K07466  replication factor A1
Organism
ota  Ostreococcus tauri
Pathway
ota03030  DNA replication
ota03420  Nucleotide excision repair
ota03430  Mismatch repair
ota03440  Homologous recombination
ota03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ota00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OT_ostta18g01440
   03420 Nucleotide excision repair
    OT_ostta18g01440
   03430 Mismatch repair
    OT_ostta18g01440
   03440 Homologous recombination
    OT_ostta18g01440
   03460 Fanconi anemia pathway
    OT_ostta18g01440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ota03000]
    OT_ostta18g01440
   03032 DNA replication proteins [BR:ota03032]
    OT_ostta18g01440
   03400 DNA repair and recombination proteins [BR:ota03400]
    OT_ostta18g01440
Transcription factors [BR:ota03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    OT_ostta18g01440
DNA replication proteins [BR:ota03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    OT_ostta18g01440
DNA repair and recombination proteins [BR:ota03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     OT_ostta18g01440
   MMR (mismatch excision repair)
     OT_ostta18g01440
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     OT_ostta18g01440
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 tRNA_anti-codon DUF223 Rep-A_N TPP1
Other DBs
NCBI-GeneID: 9838336
NCBI-ProteinID: XP_022840562
OrcAE: OT_ostta18g01440
LinkDB
Position
18:complement(259093..261174)
AA seq 576 aa
MATPSLTPGAVQKIRDGAVAAAGACVQVLDFKSADAAYSATLNDGENTIEAQFSKSVCAT
KLSKVTDRAVLKLTDVAYDGAEGGERKPFAVINGFEVVNADGSIAVEAKTPGEKVPKTEP
KTPASAERNAVPLSALNPYRTPWTVKVKLSNKGNVREYKSARGPGKVCSVDFVDEEGTAI
GATLWREAIEKYDSVLEVGKVYYVSKGTLKPADKRYSTSGNDYEMNLDGKAEIELCTDID
QSSAQKMQRAYAFVSIDKLSTKIGARGNVDVVAVVKEVSELSTIRRKSDNTELTKREIVL
ADDSTKTIRMTLWGDLAVEQGEKLAAMTNPIVAIRSVRVSDYDGVSVGTVSRSDMVIDAD
DIPRVAELKKWWTEGGSETTFSAAGEGLTSAGQGQKRDIETMNLAELQPEEIAPSTDKPV
FAWVCAHTILCKPDQTMYYAAVPEEGNNKKVVESDGKWYCEANGQTYDTCERRYIMRFKA
IDGYEGAWLNAFNDEATKMFGISANELHELHENDYKAYENAVKKMTYKHWSFLVKVVTEE
YQGELKRRLTAVKCNAVNYAAESKRLLSKMGITASN
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggcgacgccgtcgctcacccccggcgcggtgcaaaagatccgtgacggtgccgtcgcc
gccgcgggggcgtgcgtgcaggtgctcgatttcaagagcgcggacgcggcgtacagcgcg
acgctgaacgatggtgagaatacgatcgaggcgcagttttcgaaatccgtgtgcgcgacc
aagctgtcaaaggtgacggatcgcgcggtgctcaagctcacggacgtcgcgtacgacggc
gccgaggggggcgagcgtaagcccttcgcggtgattaacgggttcgaggtcgtgaacgcg
gacggttcgatcgcggtcgaggcgaagactccgggcgagaaggttccgaagacggagccg
aagacgccggcgagcgcggagcgcaacgcggtgccgctttcggcgctgaatccgtaccga
acgccgtggactgtcaaggtgaagctttcgaacaagggtaacgttcgcgagtacaagagc
gcgcgcgggccgggtaaggtgtgctcggtcgatttcgtcgacgaagagggcaccgccatt
ggcgccacgctctggagagaggcgatcgaaaagtacgactcagttctcgaggttggcaag
gtttactacgtctccaagggcactctcaagcccgccgataagagatactccacctcgggt
aatgactacgagatgaacctcgatggcaaggctgagatcgagctctgcactgacatcgac
cagtccagcgctcaaaagatgcagcgcgcatacgcgtttgtctccatcgataagctctcg
accaagattggagctcgaggcaacgttgacgtcgtcgccgtcgtcaaggaggtgagcgaa
ctctccaccattcgtcgcaagagcgacaacacggagctcaccaagcgcgaaatcgtcttg
gcggacgactccacaaagaccatcaggatgaccctctggggcgatctcgctgtcgaacaa
ggcgagaagttggcggcgatgacgaatccgatcgtggccatccgttccgttcgcgtcagt
gactacgatggagtctccgtcgggaccgtctctcgctctgacatggtgattgatgccgac
gacatcccgcgcgtcgccgaactcaagaagtggtggactgagggtggctcggagaccacg
ttctccgccgcgggcgaaggtctcaccagcgcgggacaaggacaaaagcgagacatcgaa
acgatgaacctcgccgagcttcaacccgaggaaatcgctccgtctacggacaagcctgtg
tttgcgtgggtgtgcgcgcacaccatcctgtgcaagccggatcaaaccatgtactacgcc
gctgtcccggaagagggcaataacaagaaggtcgtcgaaagcgacgggaagtggtactgc
gaggcaaacggtcaaacttatgacacgtgcgaacgccgctacatcatgcgcttcaaggct
attgacggctacgaaggcgcttggttgaacgccttcaacgatgaagcgacaaagatgttc
ggcatctcggccaacgagctgcacgagctccatgagaatgactacaaggcgtacgaaaac
gcggtcaagaagatgacgtataagcattggtctttcctcgtcaaggttgtgacggaggag
tatcaaggagagctcaagcgacgcctcaccgcggtgaagtgcaacgctgtcaactacgcc
gccgaatcaaagagacttctctccaagatgggcatcacggcttcgaattaa

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