Ostreococcus tauri: OT_ostta20g00950 Help Entry OT_ostta20g00950  CDS       T01358                                  Name (RefSeq) Tetratricopeptide repeat   KO K12867   pre-mRNA-splicing factor SYF1 Organism ota  Ostreococcus tauri Pathway ota03040   Spliceosome Brite KEGG Orthology (KO) [BR:ota00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     OT_ostta20g00950  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ota03019]     OT_ostta20g00950    03041 Spliceosome [BR:ota03041]     OT_ostta20g00950 Messenger RNA biogenesis [BR:ota03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      OT_ostta20g00950 Spliceosome [BR:ota03041]  Complex B   Other components    Prp19-related factors     OT_ostta20g00950  Complex C     OT_ostta20g00950 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N TPR_14 HAT_PRP39_N HAT_PRP39_C Suf TPR_12 TPR_15 Mad3_BUB1_I TPR_2 TPR_8 TPR_16 RPN7 ARM_TT21_C ARM_TT21 TPR_21 NRDE-2 DUF5575_C ANAPC3 TPR_7 TPR_10 PPR Motif Other DBs NCBI-GeneID:  9838613 NCBI-ProteinID:  XP_003084475 OrcAE:  OT_ostta20g00950 UniProt:  Q00RS3 LinkDB All DBs Position 20:159413..162082 Genome browser AA seq 889 aa AA seqDB search MSASDRATVDAETLRHEEIVARAPCDVEAWTRYVDALPRASASDDDAHDSLCARFLTYER GIRHNPGSYKLWYFYLVERVERGRGWRCDDARHAGTEAAFERALTTMHKMPKVWELYITY LMTLRYVTKTRRACDRALQALPVTQHERVWTLYLRFIRSDARVPGDTARRVYRRYLKFEP GHAEEYVEFLRKRGYHGEVATKLAELVNDDSFQSLAGKTKHAMWLELCDVVTKNPAAGAG VLDVDAILRGGIAAFTDEVGRLWTALADYYIRRGLFEKARDVYEEAMERVRTVRDFSLVF DAYAQFEESVISAKMENGEGMDEDDEGEDEGSDAAENFAIRDLLATSASVAPSSDLELRL ARLEHLMERRPILLSSVMLRQNPHNVLEWEKRVQLYEGDPMKQIVTFTDAIKTVDPMCAT GRVSNLWIEFAKFYETHGDAESAKTIFEKACETADFKTVDDLARCWTEYAEFCLRQDAYD DALAVMRRATTAPAHARRAQTSEEYAALTVREKAYKSLKLWTLYVDLEESLGTLESTKKV YESMIALKVATPQIILNYAHLLQEKNFFEDAFQIYEKGVSAFKFPYSKEIWSAYLTQFVA RFKGTKLERARDLFEQCLEHAPPKHAKEFFMAYAKLEEEFGLGKRAMDVYDRACRTVPVD ERLSVYDVYVNRAMEFFGVAKVRDVFTRAAEDDELPANVAKTLAVRFAEFERKLGELDRA RALYAHASQFSDPTKDAEFWSTWHEFEVRHGNEETFREMLRVKRAVAASFSDTHYNVSVV APDVDAVAADQVVPPANAMAALDREHEARAVAASGVAVHGFVRSHVEGASEPNANEAAAA GDDAEIDLDDVLGGASVPSAVFEGAGAKRTAEDASLGAMERFKRAREEQ NT seq 2670 nt NT seq  +upstreamnt  +downstreamnt atgtccgcgagcgatcgcgcgacggtggacgcggagacgcttcgtcacgaggagatcgtc gctcgcgcgccgtgtgacgtcgaggcgtggacgcgatacgtcgacgcgttgccgagagcg agtgcgagtgatgacgacgcgcacgattcgctctgcgcgcgtttcctgacgtacgagcga gggatacgacacaaccctgggagttataaactgtggtacttttatctcgtcgaacgcgtc gaacgtggacggggatggcgatgcgacgacgcgcgacacgcggggacggaggcggcgttc gagcgcgcgttgacgacgatgcacaaaatgccaaaggtgtgggaactgtacatcacgtac ctgatgacgctgagatacgtgacgaagacgcggcgcgcgtgtgatcgagcgttacaagcg ttgccggtgacgcaacacgagcgcgtgtggacgctgtatctgcgattcatacggagcgac gcgcgcgtgccgggagacaccgctcgacgggtgtatcgaaggtacttgaagtttgaaccg ggtcacgccgaggagtacgtggagttcttgcgaaagcgcgggtatcacggcgaggtggcg accaagctcgcggagctcgtgaacgatgactcgttccaatcgctcgcggggaagaccaag cacgcgatgtggctcgagctgtgcgacgtcgtgacgaagaatcccgcagctggggctggg gttttggacgtggacgccatcttgcgcggcggcatcgccgccttcacggacgaggtcggg cgcctgtggaccgcgctcgcggattattacatcagaagaggtttgtttgaaaaggctcga gacgtgtacgaggaggcgatggagcgcgtgcgcacggtgcgagacttctcgctcgtgttc gacgcgtacgcccagttcgaggagagcgtgatctcggccaagatggagaacggcgagggc atggatgaggacgacgaaggtgaagacgaggggtcggacgcggcggaaaactttgcgatt cgcgacttgctggcgacgtccgcctcggtcgcgccgtcctcggatttagagcttcgtctc gccaggctcgagcatctcatggaacgcagaccgattcttctgtcgtccgtcatgcttcga cagaatccgcacaacgtcttggaatgggaaaagcgcgtgcagctgtacgagggcgacccg atgaagcaaatcgtgacgtttaccgacgccatcaaaacggtggacccgatgtgcgcgact gggcgcgtctccaacttgtggatcgagttcgcaaagttttacgagacgcacggcgacgcg gaatcggcgaaaacgattttcgaaaaggcttgcgaaaccgccgactttaaaaccgtcgac gatctcgctcggtgctggaccgagtacgccgagttttgcctgagacaagacgcgtacgac gacgccctggcggtgatgcgtcgagcgacgacggcgcccgcgcacgctcgacgagcgcag acgtcggaggagtacgccgcgctcactgtgcgggagaaggcgtacaagtcgctcaagttg tggacgctgtacgtcgacctcgaggagtcgttgggaacgctcgagtcgacgaaaaaggtg tacgaatcgatgattgctctcaaggtggcgacgccgcaaatcatcttgaactacgcgcat ttgctccaggagaagaactttttcgaggacgcgtttcaaatttacgaaaagggcgtcagc gcgttcaagtttccctattcgaaagagatttggagcgcctatctcacgcaattcgtcgcc cggttcaagggaaccaagctcgagcgcgcgcgggatttgttcgagcagtgtctcgagcac gctccccccaagcacgcgaaggagttcttcatggcgtacgccaaactcgaggaagagttt ggtttgggcaagcgcgcgatggacgtgtacgatcgcgcgtgcaggacggtgcccgtcgac gagcgactgtccgtgtacgacgtgtacgtcaatcgcgcgatggaattcttcggcgtcgcg aaagttcgcgacgtcttcacgcgcgcggctgaggatgacgagctccccgcgaatgtcgcg aagacgctcgcggtgcgcttcgccgagtttgagcgcaaactcggcgaactcgatcgcgcg cgagcgctgtacgcgcacgcgtcgcagtttagcgatccaacaaaggatgccgagttctgg tccacctggcacgagtttgaagtcagacacgggaacgaagagacgtttcgtgagatgcta cgcgtgaagcgcgccgtcgcggcgagcttctcggacacgcactacaacgtctccgtcgtc gcgccggatgtggacgccgtcgcggcggatcaagtcgtgccgccggcgaacgcgatggcg gcgctcgatcgcgagcacgaggcgcgcgcggtagccgcgtctggcgtcgccgttcacggt ttcgttcgctcgcacgtcgagggcgcttccgagccgaacgcgaatgaagccgcggccgcc ggcgacgacgccgagattgatttggacgacgtgctcggcggcgcgagcgttccgtcggcg gtgttcgagggggcgggcgcgaaacgcaccgcggaggacgcgagtctcggcgcgatggag cggttcaagcgcgcaagggaggaacaatag

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