Onychostruthus taczanowskii (white-rumped snowfinch): 121331659
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Entry
121331659 CDS
T07590
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121331659 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otc01009
]
121331659 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otc04515
]
121331659 (PCDH9)
Protein phosphatases and associated proteins [BR:
otc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121331659 (PCDH9)
Cell adhesion molecules [BR:
otc04515
]
Cadherins
Protocadherins
121331659 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
121331659
NCBI-ProteinID:
XP_041252206
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPSTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEYSEED
ELPCLSQKCPRSTAFHLRENSQTQTDSQRRVTFHLPDGSQESCSDSGLGDHEPVGGGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGS
SEGHFNTGNHMTDIPLASLKSYKQAPGSVESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtgcccata
gggaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcacctctggtcaaagtgtccagt
aacacgggggaaatctttacaacatctaacagaatagacagagaaaaactatgtgctgga
gcttcctatgcagaagagaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaatggtgtgcagcactatgag
ctgttaaatgggcagagtgtctttggactggatattgtagaaactccagaaggggagaaa
tggcctcagctgattgtacagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtctttaaagagagtcaagtagaggtccat
ataccagagaatgcccctgtaggcacctctgtaattcagcttcatgctacagatgctgat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
cgggcgactgtcaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaagcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggtcctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagataacggcacccctcctttgcagagtcaagcggctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttacccataatcatttccagtttttc
gtatcagagaacttaccaaagtatagcacggtgggggtgatcacagtgactgatgcagat
gctggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctt
gatccgtactctggagttataaagtccaacgtttcttttgatcgagaacagcagagctct
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcaaaa
gtaacaataaacgtgatggatgttaatgataacagtcctgttgtcatctacccaccttct
aatacttcttttaagctagtgccactctcagccattccaggatcggtggtagctgaagtc
tttgctgtggatattgacactggcatgaacgctgagctgaagtacacgattgtaagcggc
aataacaagggtttgtttcggattgatcccgtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgacataggcctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttatatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctttggatcggaacata
ggggacagcagccaaccctaccaaaatgaggactatctcacaatcatgattgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcacggttcttgttcgctgtcgacat
gcatccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggaaaacaagcaaaataagaaaaagaaaaggaagaaaaggaaatctccaaagagctcc
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccatcaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagtattcagaagaagat
gaactcccatgcttgtctcagaagtgtcctagaagcacagcttttcacctaagagaaaat
tcccagacacagactgattcccagcgccgtgttacatttcacctccctgatggctcccag
gaaagctgcagtgacagtggtctgggagaccacgagccagtgggtggtggaaccctgatc
tcacaccctctccctctggttcagccgcaggacgaattctacgaccaggcttcaccggac
aagaggactgaagctgatggcaattctgaccccaactcggatgggcctcttggtccacga
ggattagctgaagctacagagatgtgtactcaagaatgcctggttttgggtcactcagac
aactgttggatgcctcctagcctgggcccataccaacagccaaagtctcctctctccacc
tttgcacctcagaaggagtgggttaagaaggacaaactagttaatggacacacattgacc
aggacctggaaagaagatagcaacagaaaccagttcagtgatcgaaagcagtatggttcc
agtgagggccatttcaacactggcaaccacatgactgacattcctctggccagcttgaag
tcttataaacaggccccgggatctgtggagagtccaaaggagcaccagctataa
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integrated database retrieval system
