Onychostruthus taczanowskii (white-rumped snowfinch): 121332389
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Entry
121332389 CDS
T07590
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
otc
Onychostruthus taczanowskii (white-rumped snowfinch)
Pathway
otc04140
Autophagy - animal
otc04142
Lysosome biogenesis
otc04145
Phagocytosis
otc04148
Efferocytosis
otc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121332389 (VPS18)
04142 Lysosome biogenesis
121332389 (VPS18)
04140 Autophagy - animal
121332389 (VPS18)
04148 Efferocytosis
121332389 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121332389 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otc04131
]
121332389 (VPS18)
Membrane trafficking [BR:
otc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121332389 (VPS18)
Hops complex
121332389 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
aq_1631
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
DUF8221
Nup54_57_C
LETM1_C
STX17_N
DUF5600
RBSN_mid
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
121332389
NCBI-ProteinID:
XP_041253752
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MRRRTSGGSAERAALGPRWAMASILDEYEDSLHRSVSVPQSRASVGIPHSGYVNARLEKE
TPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKV
YKMFLDHTGSHLLIALNTSECLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPI
LVGTSQGQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGLEGKFFI
IATTRKRLFQFVGKVPEGTEQQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSN
PRSFAWMMGNGVLYGTLDYSRPDSILSDERVWVYPPDIDITVNKPISIVLTQFHFLLLLP
DRVKAVCTLNGQVVFQDPFLEKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWK
MYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKF
IEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWLTELYLNWLGILQGDPSQRNLYLDTR
EKFRTFLSSPKNKDCLFNNRASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYD
EALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQ
QINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYA
LRLCAEHGHHRACVHIYKVMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIA
RHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELK
REMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLL
QAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDI
VAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggcgcacgtccggcgggtcagctgagcgcgccgcgctcgggccgcgctgggcc
atggcgtccatcctggacgagtacgaggactccctgcaccgctccgtgtccgtgccgcag
agccgcgccagcgtgggcatcccgcactccggatatgtcaatgcacgactggagaaggaa
acaccaatatttaacaagcagaggattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttgggaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagcgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggcactctcccgctggaaaggacac
ttgattgaaagcgtgggctggaacaaatttcttggttcagaaaccaacacagggcctatc
ttggtggggacatcccaggggcagatctatgaggctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccgacaggtctacactctggaggaggaatct
ggacctgccccagtctgctgcttggaaatcgaacgagggctagaagggaaattttttatt
atagccaccactaggaagagactctttcagtttgttggcaaagtgcctgaagggacggag
cagcaaggcttcagctccatatttgctgtgcatgctgaccatctgcccagctttcgggag
tttccagccaacttgggtttcagcgagatagccttttacacgccaaaactgcgttccaac
ccacgctcctttgcctggatgatgggaaatggtgttctgtatggtaccttggattacagt
cgtcctgattcaattctgagtgatgaacgggtctgggtttatcctcctgatattgacata
actgtgaacaagccaatatccattgtgcttacccagttccactttctgttactgctgcct
gaccgggtgaaggctgtctgcactctgaatggacaggttgtttttcaggatccgttcctg
gagaagtttggcttgctgacacgcatgattaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccatgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacattgtgttggccaaagaggcagagcactgcttccaaaacaagaggtatctg
gacagtgccaaatgttacgcactgacccagaactactttgaggaaattgctctgaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctgagtaaccta
aagccttcggagaagacacagactactctgctgaccacgtggttgacagagctgtacctg
aactggctgggcatattgcagggagatccctcacagcgaaatctctatttggatacgcgg
gagaagttccgcactttcctgagcagtcctaaaaacaaagactgtctttttaataatcgg
gcatctatttatgagctgttggcaagccatggcgacacagagcacatggtctactttgca
gtcatcatgcaggattacgagcgtgtagtagctcaccactgccagcatgacgagtacgat
gaggctctaaatgtgctgtccaggcacagagacgagaaactcttctacaagttctctccg
gttctcatccagcatattcccaagaaggtcgttgacgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagccatcagatatatggagttctgtgtctaccagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccggactcgctgctg
tcatacctggagcaagcaggaactaacccaaacaggatccactacgacctgaagtatgca
ctgcgcctgtgtgcagagcacgggcaccaccgtgcatgcgtccatatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggaactccggaagaagctgtggttgaagattgct
cgccatgttgttcaggaagagaaagatgtcaagaaggcaatggcctgcctctcgagctgt
gctctgctgaagattgaagatgtgctgccattctttccagactttgtcaccattgatcat
ttcaaggaggcaatctgtaactccctggaggattacaacaagcacattgaggagctgaaa
agggagatggaggaagccactcagagtgccaagaggatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgtcctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttccctaaccttcctgcttataagcaggcaaaacttgaagatcttcagaag
aaactggcagctaccagccagccatccaagagccaccatcgtcccaaggatgcagacacc
attagcctggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccagaagtatgaagaggagatgcaaagctggttgtaa
DBGET
integrated database retrieval system
